PDB: 5515 件ウェブページステータス検索Chemie searchBIRD

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6BEN	Solution structure of de novo macrocycle design8.2 分子名称: (DAR)Q(DPR)(DGN)R(DGL)PQ 著者 Shortridge, M.D, Hosseinzadeh, P, Pardo-Avila, F, Varani, G, Baker, B. 登録日 2017-10-25 公開日 2017-12-27 最終更新日 2023-06-14 実験手法 SOLUTION NMR 主引用文献 Comprehensive computational design of ordered peptide macrocycles. Science, 358, 2017
5ET3	Crystal Structure of De novo Designed Fullerene organizing peptide 分子名称: (C_{60}-I_{h})[5,6]fullerene, Fullerene Organizing Protein (C60Sol-COP-3) 著者 Kim, K.-H, Kim, Y.H, Acharya, R, Kim, N.H, Paul, J, Grigoryan, G, DeGrado, W.F. 登録日 2015-11-17 公開日 2016-05-04 最終更新日 2023-11-08 実験手法 X-RAY DIFFRACTION (1.671 Å) 主引用文献 Protein-directed self-assembly of a fullerene crystal. Nat Commun, 7, 2016
5CWD	Crystal structure of de novo designed helical repeat protein DHR7 分子名称: Designed helical repeat protein 著者 Bhabha, G, Ekiert, D.C. 登録日 2015-07-28 公開日 2015-12-16 最終更新日 2017-10-11 実験手法 X-RAY DIFFRACTION (2.61 Å) 主引用文献 Exploring the repeat protein universe through computational protein design. Nature, 528, 2015
5CWI	Crystal structure of de novo designed helical repeat protein DHR18 分子名称: Designed helical repeat protein, PHOSPHATE ION 著者 Bhabha, G, Ekiert, D.C. 登録日 2015-07-28 公開日 2015-12-16 最終更新日 2016-01-06 実験手法 X-RAY DIFFRACTION (1.75 Å) 主引用文献 Exploring the repeat protein universe through computational protein design. Nature, 528, 2015
5KNG	CRYSTAL STRUCTURE OF ANTI-IL-13 DARPIN 6G9 分子名称: DARPIN 6G9, GLYCEROL, PHOSPHATE ION 著者 Teplyakov, A, Malia, T, Obmolova, G, Gilliland, G. 登録日 2016-06-28 公開日 2016-12-14 最終更新日 2023-09-27 実験手法 X-RAY DIFFRACTION (1.35 Å) 主引用文献 Conformational flexibility of an anti-IL-13 DARPin. Protein Eng. Des. Sel., 30, 2017
8A3G	X-ray crystal structure of a de novo designed antiparallel coiled-coil homotetramer with 4 heptad repeats, apCC-Tet* 分子名称: ACETATE ION, SODIUM ION, apCC-Tet* 著者 Naudin, E.A, Mylemans, B, Albanese, K.I, Woolfson, D.N. 登録日 2022-06-08 公開日 2022-10-05 最終更新日 2022-11-23 実験手法 X-RAY DIFFRACTION (0.96 Å) 主引用文献 From peptides to proteins: coiled-coil tetramers to single-chain 4-helix bundles. Chem Sci, 13, 2022
8A3I	X-ray crystal structure of a de novo designed antiparallel coiled-coil homotetramer with 3 heptad repeats, apCC-Tet*3 分子名称: apCC-Tet*3 著者 Naudin, E.A, Mylemans, B, Albanese, K.I, Woolfson, D.N. 登録日 2022-06-08 公開日 2022-10-05 最終更新日 2024-05-01 実験手法 X-RAY DIFFRACTION (1.42 Å) 主引用文献 From peptides to proteins: coiled-coil tetramers to single-chain 4-helix bundles. Chem Sci, 13, 2022
8A3K	X-ray crystal structure of a de novo designed single-chain antiparallel 4-helix coiled-coil bundle, sc-apCC-4 分子名称: sc-apCC-4 著者 Albanese, K.I, Mylemans, B, Naudin, E.A, Woolfson, D.N. 登録日 2022-06-08 公開日 2022-10-05 最終更新日 2024-05-01 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 From peptides to proteins: coiled-coil tetramers to single-chain 4-helix bundles. Chem Sci, 13, 2022
8A3J	X-ray crystal structure of a de novo designed antiparallel coiled-coil heterotetramer with 3 heptad repeats, apCC-Tet*3-A2B2 分子名称: apCC-Tet*3-A, apCC-Tet*3-B 著者 Naudin, E.A, Mylemans, B, Albanese, K.I, Woolfson, D.N. 登録日 2022-06-08 公開日 2022-10-05 最終更新日 2022-11-23 実験手法 X-RAY DIFFRACTION (2.1 Å) 主引用文献 From peptides to proteins: coiled-coil tetramers to single-chain 4-helix bundles. Chem Sci, 13, 2022
4IH3	2.5 Angstroms X-ray crystal structure of of human 2-amino-3-carboxymuconate-6-semialdehyde decarboxylase in complex with dipicolinic acid 分子名称: 2-amino-3-carboxymuconate-6-semialdehyde decarboxylase, PYRIDINE-2,6-DICARBOXYLIC ACID, ZINC ION 著者 Huo, L, Liu, A. 登録日 2012-12-18 公開日 2014-05-21 最終更新日 2023-09-20 実験手法 X-RAY DIFFRACTION (2.493 Å) 主引用文献 Human alpha-amino-beta-carboxymuconate-epsilon-semialdehyde decarboxylase (ACMSD): A structural and mechanistic unveiling. Proteins, 83, 2015
4IGN	2.32 Angstrom X-ray Crystal structure of R47A mutant of human ACMSD 分子名称: 2-amino-3-carboxymuconate-6-semialdehyde decarboxylase, ZINC ION 著者 Liu, F, Liu, A. 登録日 2012-12-17 公開日 2014-05-07 最終更新日 2024-02-28 実験手法 X-RAY DIFFRACTION (2.329 Å) 主引用文献 Human alpha-amino-beta-carboxymuconate-epsilon-semialdehyde decarboxylase (ACMSD): A structural and mechanistic unveiling. Proteins, 83, 2015
7KUW	High-throughput design and refinement of stable proteins using sequence-only models 分子名称: Sequence-Based Designed Protein nmt_0994_guided_02 著者 Bera, A.K, Stewart, L, Kang, A.S, Baker, D. 登録日 2020-11-25 公開日 2021-12-15 最終更新日 2024-04-03 実験手法 X-RAY DIFFRACTION (2.43 Å) 主引用文献 Large-scale design and refinement of stable proteins using sequence-only models. Plos One, 17, 2022
6NL9	Crystal structure of de novo designed metal-controlled dimer of mutant B1 immunoglobulin-binding domain of Streptococcal Protein G (L12H, T16L, V29H, Y33H, N37L)-apo 分子名称: Immunoglobulin G-binding protein G, MAGNESIUM ION, SODIUM ION 著者 Maniaci, B, Stec, B, Huxford, T. 登録日 2019-01-08 公開日 2019-01-23 最終更新日 2023-10-25 実験手法 X-RAY DIFFRACTION (1.7 Å) 主引用文献 Design of High-Affinity Metal-Controlled Protein Dimers. Biochemistry, 58, 2019
1LT1	SLIDING HELIX INDUCED CHANGE OF COORDINATION GEOMETRY IN A MODEL DI-MN(II) PROTEIN 分子名称: L13G-DF1, MANGANESE (II) ION 著者 Di Costanzo, L, Geremia, S. 登録日 2002-05-20 公開日 2003-05-20 最終更新日 2023-10-25 実験手法 X-RAY DIFFRACTION (1.91 Å) 主引用文献 Sliding helix and change of coordination geometry in a model di-MnII protein Angew.Chem.Int.Ed.Engl., 42, 2003
6NLA	Crystal structure of de novo designed metal-controlled dimer of B1 immunoglobulin-binding domain of Streptococcal Protein G (L12H, E15V, T16L, T18I, V29H, Y33H, N37L)-zinc 分子名称: CHLORIDE ION, GLYCEROL, Immunoglobulin G-binding protein G, ... 著者 Maniaci, B, Stec, B, Huxford, T. 登録日 2019-01-08 公開日 2019-01-23 最終更新日 2023-10-25 実験手法 X-RAY DIFFRACTION (1.34 Å) 主引用文献 Design of High-Affinity Metal-Controlled Protein Dimers. Biochemistry, 58, 2019
6NY8	Crystal structure of computationally designed protein XAA_GVDQ with calcium 分子名称: CALCIUM ION, CHLORIDE ION, Design construct XAA_GVDQ 著者 Wei, K.Y, Bick, M.J. 登録日 2019-02-11 公開日 2020-04-22 最終更新日 2024-03-13 実験手法 X-RAY DIFFRACTION (2.3 Å) 主引用文献 Computational design of closely related proteins that adopt two well-defined but structurally divergent folds. Proc.Natl.Acad.Sci.USA, 117, 2020
6NYE	Crystal structure of computationally designed protein XAX 分子名称: Design construct XAX 著者 Wei, K.Y, Bick, M.J. 登録日 2019-02-11 公開日 2020-04-22 最終更新日 2024-03-13 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 Computational design of closely related proteins that adopt two well-defined but structurally divergent folds. Proc.Natl.Acad.Sci.USA, 117, 2020
6NXM	Crystal structure of computationally designed protein XAA_GVDQ 分子名称: Design construct XAA_GVDQ 著者 Wei, K.Y, Bick, M.J. 登録日 2019-02-08 公開日 2020-04-22 最終更新日 2024-03-13 実験手法 X-RAY DIFFRACTION (2.2 Å) 主引用文献 Computational design of closely related proteins that adopt two well-defined but structurally divergent folds. Proc.Natl.Acad.Sci.USA, 117, 2020
6NX2	Crystal structure of computationally designed protein AAA 分子名称: BROMIDE ION, Design construct AAA 著者 Wei, K.Y, Bick, M.J. 登録日 2019-02-07 公開日 2020-04-22 最終更新日 2024-04-03 実験手法 X-RAY DIFFRACTION (2.3 Å) 主引用文献 Computational design of closely related proteins that adopt two well-defined but structurally divergent folds. Proc.Natl.Acad.Sci.USA, 117, 2020
6NZ3	Crystal structure of computationally designed protein XAA_GGHN 分子名称: CHLORIDE ION, Design construct XAA_GGHN 著者 Wei, K.Y, Bick, M.J. 登録日 2019-02-12 公開日 2020-04-22 最終更新日 2024-03-13 実験手法 X-RAY DIFFRACTION (2.3 Å) 主引用文献 Computational design of closely related proteins that adopt two well-defined but structurally divergent folds. Proc.Natl.Acad.Sci.USA, 117, 2020
6NYI	Crystal structure of computationally designed protein XXA 分子名称: Design construct XXA 著者 Wei, K.Y, Bick, M.J. 登録日 2019-02-11 公開日 2020-04-22 最終更新日 2024-03-13 実験手法 X-RAY DIFFRACTION (2.3 Å) 主引用文献 Computational design of closely related proteins that adopt two well-defined but structurally divergent folds. Proc.Natl.Acad.Sci.USA, 117, 2020
6NYK	Crystal structure of computationally designed protein XAX_GGDQ 分子名称: Design construct XAX_GGDQ 著者 Wei, K.Y, Bick, M.J. 登録日 2019-02-11 公開日 2020-04-22 最終更新日 2024-03-13 実験手法 X-RAY DIFFRACTION (2.8 Å) 主引用文献 Computational design of closely related proteins that adopt two well-defined but structurally divergent folds. Proc.Natl.Acad.Sci.USA, 117, 2020
1N0D	Stability of cyclic beta-hairpins: Asymmetric contibutions from side chains of hydrogen bonded cross-strand residue pair 分子名称: bhp_VWLH, disulfide cyclized beta-hairpin peptide 著者 Russell, S.J, Blandl, T, Skelton, N.J, Cochran, A.G. 登録日 2002-10-11 公開日 2003-02-04 最終更新日 2022-02-23 実験手法 SOLUTION NMR 主引用文献 Stability of Cyclic Beta-Hairpins: Asymmetric Contributions From Side Chains of Hydrogen Bonded Cross-Strand Residue Pair J.Am.Chem.Soc., 125, 2003
6NZ1	Crystal structure of computationally designed protein XXA_GVDQ 分子名称: Design construct XXA_GVDQ 著者 Wei, K.Y, Bick, M.J. 登録日 2019-02-12 公開日 2020-04-22 最終更新日 2024-04-03 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 Computational design of closely related proteins that adopt two well-defined but structurally divergent folds. Proc.Natl.Acad.Sci.USA, 117, 2020
3JCI	2.9 Angstrom Resolution Cryo-EM 3-D Reconstruction of Close-packed PCV2 Virus-like Particles 分子名称: Capsid protein 著者 Liu, Z, Guo, F, Wang, F, Li, T.C, Jiang, W. 登録日 2015-12-13 公開日 2016-02-03 最終更新日 2024-02-21 実験手法 ELECTRON MICROSCOPY (2.9 Å) 主引用文献 2.9 angstrom Resolution Cryo-EM 3D Reconstruction of Close-Packed Virus Particles. Structure, 24, 2016

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