PDB: 41522 件ウェブページステータス検索Chemie searchBIRD

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6L64	X-ray structure of human galectin-10 in complex with D-glucose 分子名称: Galectin-10, beta-D-glucopyranose 著者 Kamitori, S. 登録日 2019-10-28 公開日 2020-03-04 最終更新日 2023-11-22 実験手法 X-RAY DIFFRACTION (2.08 Å) 主引用文献 Structures of human galectin-10/monosaccharide complexes demonstrate potential of monosaccharides as effectors in forming Charcot-Leyden crystals. Biochem.Biophys.Res.Commun., 2020
4GA4	Crystal structure of AMP phosphorylase N-terminal deletion mutant 分子名称: PHOSPHATE ION, Putative thymidine phosphorylase 著者 Nishitani, Y, Aono, R, Nakamura, A, Sato, T, Atomi, H, Imanaka, T, Miki, K. 登録日 2012-07-25 公開日 2013-05-15 最終更新日 2023-11-08 実験手法 X-RAY DIFFRACTION (3.51 Å) 主引用文献 Structure analysis of archaeal AMP phosphorylase reveals two unique modes of dimerization J.Mol.Biol., 425, 2013
6L6A	X-ray structure of human galectin-10 in complex with D-mannose 分子名称: Galectin-10, beta-D-mannopyranose 著者 Kamitori, S. 登録日 2019-10-28 公開日 2020-03-04 最終更新日 2023-11-22 実験手法 X-RAY DIFFRACTION (1.81 Å) 主引用文献 Structures of human galectin-10/monosaccharide complexes demonstrate potential of monosaccharides as effectors in forming Charcot-Leyden crystals. Biochem.Biophys.Res.Commun., 2020
4GAM	Complex structure of Methane monooxygenase hydroxylase and regulatory subunit 分子名称: FE (III) ION, Methane monooxygenase component A alpha chain, Methane monooxygenase component A beta chain, ... 著者 Lee, S.J, Lippard, S.J, Cho, U.-S. 登録日 2012-07-25 公開日 2013-02-06 最終更新日 2023-09-13 実験手法 X-RAY DIFFRACTION (2.902 Å) 主引用文献 Control of substrate access to the active site in methane monooxygenase. Nature, 494, 2013
2G83	Structure of activated G-alpha-i1 bound to a nucleotide-state-selective peptide: Minimal determinants for recognizing the active form of a G protein alpha subunit 分子名称: GUANOSINE-5'-DIPHOSPHATE, Guanine nucleotide-binding protein G(i), alpha-1 subunit, ... 著者 Johnston, C.A, Ramer, J.K, Blaesius, R, Kuhlman, B, Arshavsky, V.Y, Siderovski, D.P. 登録日 2006-03-01 公開日 2006-10-10 最終更新日 2023-08-30 実験手法 X-RAY DIFFRACTION (2.8 Å) 主引用文献 Minimal Determinants for Binding Activated Galpha from the Structure of a Galpha(i1)-Peptide Dimer. Biochemistry, 45, 2006
7Z97	Crystal structure of the F191M variant of Variovorax paradoxus indole monooxygenase (VpIndA1) in complex with 6-bromoindole 分子名称: 1,2-ETHANEDIOL, 6-bromo-1H-indole, FLAVIN-ADENINE DINUCLEOTIDE, ... 著者 Kratky, J, Weisse, R, Strater, N. 登録日 2022-03-20 公開日 2023-02-22 最終更新日 2024-02-07 実験手法 X-RAY DIFFRACTION (1.46 Å) 主引用文献 Structural and Mechanistic Studies on Substrate and Stereoselectivity of the Indole Monooxygenase VpIndA1: New Avenues for Biocatalytic Epoxidations and Sulfoxidations. Angew.Chem.Int.Ed.Engl., 62, 2023
5HV4	Crystal Structure of a Prolyl 4-Hydroxylase Complexed with Alpha-ketoglutarate from the Pathogenic Bacterium Bacillus anthracis in C2221 分子名称: 2-OXOGLUTARIC ACID, 2OG-Fe(II) oxygenase, CADMIUM ION, ... 著者 Schnicker, N.J, Dey, M. 登録日 2016-01-28 公開日 2016-05-04 最終更新日 2023-09-27 実験手法 X-RAY DIFFRACTION (2.35 Å) 主引用文献 Structural analysis of cofactor binding for a prolyl 4-hydroxylase from the pathogenic bacterium Bacillus anthracis. Acta Crystallogr D Struct Biol, 72, 2016
4M9Y	Crystal structure of CED-4 bound CED-3 fragment 分子名称: ADENOSINE-5'-TRIPHOSPHATE, CED-3 fragment, Cell death protein 4, ... 著者 Huang, W.J, Jinag, T.Y, Choi, W.Y, Wang, J.W, Shi, Y.G. 登録日 2013-08-15 公開日 2013-10-23 最終更新日 2023-12-06 実験手法 X-RAY DIFFRACTION (4.2 Å) 主引用文献 Mechanistic insights into CED-4-mediated activation of CED-3. Genes Dev., 27, 2013
5HVI	Crystal structure of TEM1 beta-lactamase 分子名称: Beta-lactamase TEM 著者 Roose, B.W, Dmochowski, I.J. 登録日 2016-01-28 公開日 2017-06-28 最終更新日 2023-09-27 実験手法 X-RAY DIFFRACTION (1.64 Å) 主引用文献 A Structural Basis for129Xe Hyper-CEST Signal in TEM-1 beta-Lactamase. Chemphyschem, 2018
4HQL	Crystal structure of magnesium-loaded Plasmodium vivax TRAP protein 分子名称: CHLORIDE ION, MAGNESIUM ION, Sporozoite surface protein 2, ... 著者 Song, G, Koksal, A.C, Lu, C, Springer, T.A. 登録日 2012-10-25 公開日 2012-12-26 最終更新日 2023-09-20 実験手法 X-RAY DIFFRACTION (2.241 Å) 主引用文献 Shape change in the receptor for gliding motility in Plasmodium sporozoites. Proc.Natl.Acad.Sci.USA, 109, 2012
6L3H	Cryo-EM structure of dimeric quinol dependent Nitric Oxide Reductase (qNOR) from the pathogen Neisseria meninigitidis 分子名称: CALCIUM ION, FE (III) ION, Nitric-oxide reductase, ... 著者 Jamali, M.M.A, Gopalasingam, C.C, Johnson, R.M, Tosha, T, Muench, S.P, Muramoto, K, Antonyuk, S.V, Shiro, Y, Hasnain, S.S. 登録日 2019-10-11 公開日 2020-04-01 最終更新日 2024-03-27 実験手法 ELECTRON MICROSCOPY (3.06 Å) 主引用文献 The active form of quinol-dependent nitric oxide reductase fromNeisseria meningitidisis a dimer. Iucrj, 7, 2020
4G3U	Mycobacterium smegmatis DprE1 - monoclinic crystal form 分子名称: oxidoreductase DprE1 著者 Li, H, Jogl, G. 登録日 2012-07-15 公開日 2012-12-05 最終更新日 2024-02-28 実験手法 X-RAY DIFFRACTION (2.689 Å) 主引用文献 Crystal structure of decaprenylphosphoryl-beta- D-ribose 2'-epimerase from Mycobacterium smegmatis. Proteins, 81, 2013
5HNW	Structural basis of backwards motion in kinesin-14: minus-end directed nKn664 in the AMPPNP state 分子名称: GUANOSINE-5'-DIPHOSPHATE, GUANOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, ... 著者 Shigematsu, H, Yokoyama, T, Kikkawa, M, Shirouzu, M, Nitta, R. 登録日 2016-01-19 公開日 2016-08-10 最終更新日 2018-07-25 実験手法 ELECTRON MICROSCOPY (6.6 Å) 主引用文献 Structural Basis of Backwards Motion in Kinesin-1-Kinesin-14 Chimera: Implication for Kinesin-14 Motility Structure, 24, 2016
2G7I	Structure of Human Complement Factor H Carboxyl Terminal Domains 19-20: a Basis for Atypical Hemolytic Uremic Syndrome 分子名称: Complement factor H 著者 Jaakola, V.-P, Jokiranta, T.S, Goldman, A. 登録日 2006-02-28 公開日 2006-05-23 最終更新日 2011-07-13 実験手法 X-RAY DIFFRACTION (1.75 Å) 主引用文献 Structure of complement factor H carboxyl-terminus reveals molecular basis of atypical haemolytic uremic syndrome. Embo J., 25, 2006
4HS8	Hepatitus C envelope glycoprotein E2 fragment 412-423 with humanized and affinity-matured antibody hu5B3.v3 分子名称: E2-peptide, GLYCEROL, SULFATE ION, ... 著者 Eigenbrot, C, Ultsch, M. 登録日 2012-10-29 公開日 2013-04-03 最終更新日 2023-09-20 実験手法 X-RAY DIFFRACTION (2.6 Å) 主引用文献 Glycan shifting on hepatitis C virus (HCV) e2 glycoprotein is a mechanism for escape from broadly neutralizing antibodies. J.Mol.Biol., 425, 2013
5HP4	Crystal structure bacteriohage T5 D15 flap endonuclease (D155K) pseudo-enzyme-product complex with DNA and metal ions 分子名称: CALCIUM ION, DNA (5'-D(*GP*AP*TP*CP*TP*AP*TP*AP*TP*GP*CP*CP*AP*TP*CP*GP*G)-3'), Exodeoxyribonuclease, ... 著者 Almalki, F.A, Zhang, J, Sedelnikova, S.E, Rafferty, J.B, Sayers, J.R, Artymiuk, P.A. 登録日 2016-01-20 公開日 2016-06-01 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (1.86 Å) 主引用文献 Direct observation of DNA threading in flap endonuclease complexes. Nat.Struct.Mol.Biol., 23, 2016
7CXT	Crystal structure of a GDP-6-OMe-4-keto-L-xylo-heptose reductase from C.jejuni 分子名称: GDP-L-fucose synthase, NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE 著者 Kim, J.H, Kim, J.S. 登録日 2020-09-02 公開日 2021-04-14 最終更新日 2023-11-29 実験手法 X-RAY DIFFRACTION (2.05 Å) 主引用文献 Crystal structure of a GDP-6-OMe-4-keto-L-xylo-heptose reductase from Campylobacter jejuni. Proteins, 2021
7Z5F	VP2-only capsid of MVM D263A mutant 分子名称: Capsid protein VP1 著者 Luque, D, Ortega-Esteban, A, Valbuena, A, Vilas, J.L, Rodriguez-Huete, A, Mateu, M.G, Caston, J.R. 登録日 2022-03-09 公開日 2023-03-08 最終更新日 2024-07-17 実験手法 ELECTRON MICROSCOPY (3.22 Å) 主引用文献 Equilibrium Dynamics of a Biomolecular Complex Analyzed at Single-amino Acid Resolution by Cryo-electron Microscopy. J.Mol.Biol., 435, 2023
6LJK	Crystal structure of human Sirt5 in complex with an internally quenched fluorescent substrate GluIQF 分子名称: BE2-SER-ALA-ILE-LYS-SER-NIY-GLY-SET, GLUTARIC ACID, NAD-dependent protein deacylase sirtuin-5, ... 著者 Chen, Q, Yu, Y. 登録日 2019-12-17 公開日 2020-12-23 最終更新日 2023-11-22 実験手法 X-RAY DIFFRACTION (1.394 Å) 主引用文献 Sensitive fluorogenic substrates for sirtuin deacylase inhibitor discovery. Eur.J.Med.Chem., 192, 2020
7Z5E	VP2-only capsid of MVM D263A mutant 分子名称: Capsid protein VP1 著者 Luque, D, Ortega-Esteban, A, Valbuena, A, Vilas, J.L, Rodriguez-Huete, A, Mateu, M.G, Caston, J.R. 登録日 2022-03-09 公開日 2023-03-08 最終更新日 2024-07-17 実験手法 ELECTRON MICROSCOPY (3.32 Å) 主引用文献 Equilibrium Dynamics of a Biomolecular Complex Analyzed at Single-amino Acid Resolution by Cryo-electron Microscopy. J.Mol.Biol., 435, 2023
4G8V	Crystal structure of Ribonuclease A in complex with 5a 分子名称: 1-{[1-(alpha-L-arabinofuranosyl)-1H-1,2,3-triazol-4-yl]methyl}-2,4-dioxo-1,2,3,4-tetrahydropyrimidine, Ribonuclease pancreatic 著者 Chatzileontiadou, D.S.M, Kantsadi, A.L, Leonidas, D.D. 登録日 2012-07-23 公開日 2012-11-21 最終更新日 2023-09-13 実験手法 X-RAY DIFFRACTION (1.7 Å) 主引用文献 Triazole pyrimidine nucleosides as inhibitors of Ribonuclease A. Synthesis, biochemical, and structural evaluation. Bioorg.Med.Chem., 20, 2012
4HQK	Crystal structure of Plasmodium falciparum TRAP, P4212 form 分子名称: SULFATE ION, Thrombospondin-related anonymous protein, TRAP 著者 Song, G, Koksal, A.C, Lu, C, Springer, T.A. 登録日 2012-10-25 公開日 2012-12-26 最終更新日 2023-09-20 実験手法 X-RAY DIFFRACTION (2.249 Å) 主引用文献 Shape change in the receptor for gliding motility in Plasmodium sporozoites. Proc.Natl.Acad.Sci.USA, 109, 2012
2GA0	Variable Small Protein 1 of Borrelia turicatae (VspA or Vsp1) 分子名称: NICKEL (II) ION, surface protein VspA 著者 Lawson, C.L, Yung, B.H, Barbour, A.G, Zuckert, W.R. 登録日 2006-03-07 公開日 2006-06-27 最終更新日 2023-08-30 実験手法 X-RAY DIFFRACTION (2.7 Å) 主引用文献 Crystal structure of neurotropism-associated variable surface protein 1 (Vsp1) of Borrelia turicatae. J.Bacteriol., 188, 2006
6LA0	Crystal structure of AoRut 分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Glycoside hydrolase family 5 著者 Koseki, T, Makabe, K. 登録日 2019-11-11 公開日 2020-11-11 最終更新日 2023-11-22 実験手法 X-RAY DIFFRACTION (1.75 Å) 主引用文献 Aspergillus oryzae Rutinosidase: Biochemical and Structural Investigation. Appl.Environ.Microbiol., 87, 2021
4HQX	CRYSTAL STRUCTURE OF HUMAN PDGF-BB IN COMPLEX WITH A Modified nucleotide aptamer (SOMAmer SL4) 分子名称: MAGNESIUM ION, Platelet-derived growth factor subunit B, SODIUM ION, ... 著者 Davies, D.R, Edwards, T.E, Janjic, N, Gelinas, A.D, Zhang, C, Jarvis, T.C. 登録日 2012-10-26 公開日 2012-11-21 最終更新日 2023-09-20 実験手法 X-RAY DIFFRACTION (2.3 Å) 主引用文献 Unique motifs and hydrophobic interactions shape the binding of modified DNA ligands to protein targets. Proc.Natl.Acad.Sci.USA, 109, 2012

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