PDB: 30805 件ウェブページステータス検索Chemie searchBIRD

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6UKE	HhaI endonuclease in Complex with Iodine-Labelled DNA 分子名称: 1,2-ETHANEDIOL, ACETATE ION, CALCIUM ION, ... 著者 Horton, J.R, Cheng, X. 登録日 2019-10-04 公開日 2019-12-18 最終更新日 2024-03-13 実験手法 X-RAY DIFFRACTION (1.62 Å) 主引用文献 Structure of HhaI endonuclease with cognate DNA at an atomic resolution of 1.0 angstrom. Nucleic Acids Res., 48, 2020
7N08	Crystal structure of the 3D6 antibody fragment bound to the HIV-1 gp41 immunodominant region 分子名称: Fab 3D6 heavy chain, Fab 3D6 light chain, HIV-1 gp41 immunodominant region 著者 Cook, J.D, Lee, J.E. 登録日 2021-05-25 公開日 2022-03-30 最終更新日 2023-10-18 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Conformational plasticity of the HIV-1 gp41 immunodominant region is recognized by multiple non-neutralizing antibodies. Commun Biol, 5, 2022
8OWR	Crystal structure of Mycobacterium smegmatis CoaB in complex with CTP and 2-(1-(3,4-dihydroxyphenyl)-5-(3-hydroxyphenyl)-1H-indol-3-yl)-2-oxoacetic acid 分子名称: 2-[1-[3,4-bis(oxidanyl)phenyl]-5-(3-hydroxyphenyl)indol-3-yl]-2-oxidanylidene-ethanoic acid, ACETATE ION, CALCIUM ION, ... 著者 Mendes, V, Blundell, T.L. 登録日 2023-04-28 公開日 2024-05-08 実験手法 X-RAY DIFFRACTION (2.439 Å) 主引用文献 Development of new inhibitors against M. tuberculosis CoaBC using a fragment based approach. To Be Published
8CKG	Semaphorin-5A TSR 3-4 domains in complex with sulfate 分子名称: SULFATE ION, Semaphorin-5A, alpha-D-mannopyranose 著者 Nagy, G.N, Duman, R, Harlos, K, El Omari, K, Wagner, A, Jones, E.Y. 登録日 2023-02-15 公開日 2024-02-28 実験手法 X-RAY DIFFRACTION (1.714 Å) 主引用文献 Semaphorin-5A TSR 3-4 domains in complex with sulfate To Be Published
6ADE	Crystal structure of phosphorylated mutant of glyceraldehyde 3-phosphate dehydrogenase from human placenta at 3.15A resolution 分子名称: Glyceraldehyde-3-phosphate dehydrogenase, NICOTINAMIDE-ADENINE-DINUCLEOTIDE 著者 Dilawari, R, Singh, P.K, Raje, M, Sharma, S, Singh, T.P. 登録日 2018-07-31 公開日 2018-08-22 最終更新日 2023-11-22 実験手法 X-RAY DIFFRACTION (3.15 Å) 主引用文献 Crystal structure of phosphorylated mutant of glyceraldehyde 3-phosphate dehydrogenase from human placenta at 3.15A resolution To Be Published
6OWC	Mutant estrogen receptor alpha (ERa) Y537S covalently bound to H3B-6545. 分子名称: (2Z)-N,N-dimethyl-4-{[2-({5-[(1Z)-4,4,4-trifluoro-1-(3-fluoro-2H-indazol-5-yl)-2-phenylbut-1-en-1-yl]pyridin-2-yl}oxy)ethyl]amino}but-2-enamide, 1,2-ETHANEDIOL, Estrogen receptor 著者 Larsen, N.A. 登録日 2019-05-09 公開日 2019-06-19 最終更新日 2023-10-11 実験手法 X-RAY DIFFRACTION (1.85 Å) 主引用文献 Mutant estrogen receptor alpha (ERa) Y537S covalently bound to H3B-6545. To Be Published
8CKK	Semaphorin-5A TSR 3-4 domains in complex with nitrate 分子名称: NITRATE ION, Semaphorin-5A, alpha-D-mannopyranose 著者 Nagy, G.N, Duman, R, Harlos, K, El Omari, K, Wagner, A, Jones, E.Y. 登録日 2023-02-15 公開日 2024-02-28 実験手法 X-RAY DIFFRACTION (1.56 Å) 主引用文献 Semaphorin-5A TSR 3-4 domains in complex with nitrate To Be Published
5ADC	Structure of rat neuronal nitric oxide synthase heme domain in complex with 7-(((5-((Methylamino)methyl)pyridin-3-yl)oxy)methyl) quinolin-2-amine 分子名称: 5,6,7,8-TETRAHYDROBIOPTERIN, 7-[[5-[(methylideneamino)methyl]pyridin-3-yl]oxymethyl]quinolin-2-amine, ACETATE ION, ... 著者 Li, H, Poulos, T.L. 登録日 2015-08-20 公開日 2015-10-28 最終更新日 2024-05-08 実験手法 X-RAY DIFFRACTION (2.1 Å) 主引用文献 Phenyl Ether- and Aniline-Containing 2-Aminoquinolines as Potent and Selective Inhibitors of Neuronal Nitric Oxide Synthase. J.Med.Chem., 58, 2015
6O8N	Crystal Structure of C9S tetrasulfide state of Sulfide-responsive transcriptional repressor (SqrR) from Rhodobacter capsulatus. 分子名称: SULFATE ION, Transcriptional regulator, ArsR family 著者 Capdevila, D.A, Gonzalez-Gutierrez, G, Giedroc, D.P. 登録日 2019-03-11 公開日 2020-04-01 最終更新日 2023-11-15 実験手法 X-RAY DIFFRACTION (1.95 Å) 主引用文献 Structural basis for persulfide-sensing specificity in a transcriptional regulator. Nat.Chem.Biol., 17, 2021
7N05	Crystal structure of the F240 antibody fragment bound to the HIV-1 gp41 immunodominant region 分子名称: ACETATE ION, Fab F240 heavy chain, Fab F240 light chain, ... 著者 Cook, J.D, Lee, J.E. 登録日 2021-05-25 公開日 2022-03-30 最終更新日 2023-10-18 実験手法 X-RAY DIFFRACTION (1.7 Å) 主引用文献 Conformational plasticity of the HIV-1 gp41 immunodominant region is recognized by multiple non-neutralizing antibodies. Commun Biol, 5, 2022
6LOA	Crystal structure of RORgammat with ligand C46D bound 分子名称: 9-ethyl-~{N}-[(4-ethylsulfonylphenyl)methyl]-6-propan-2-yloxy-carbazole-3-carboxamide, Nuclear receptor ROR-gamma 著者 Feng, Y, Shijie, C. 登録日 2020-01-04 公開日 2021-01-06 最終更新日 2023-11-29 実験手法 X-RAY DIFFRACTION (2.50003314 Å) 主引用文献 Crystal structure of RORgammat with ligand C46D bound To Be Published
6OWX	Spy H96L:Im7 L18pI-Phe complex; multiple anomalous datasets contained herein for element identification 分子名称: CHLORIDE ION, IMIDAZOLE, IODIDE ION, ... 著者 Rocchio, S, Duman, R, El Omari, K, Mykhaylyk, V, Yan, Z, Wagner, A, Bardwell, J.C.A, Horowitz, S. 登録日 2019-05-12 公開日 2019-05-29 最終更新日 2023-10-11 実験手法 X-RAY DIFFRACTION (2.06 Å) 主引用文献 Identifying dynamic, partially occupied residues using anomalous scattering. Acta Crystallogr D Struct Biol, 75, 2019
8CKL	Semaphorin-5A TSR 3-4 domains in complex with sucrose octasulfate (SOS) 分子名称: 2,3,4,6-tetra-O-sulfonato-alpha-D-glucopyranose-(1-2)-1,3,4,6-tetra-O-sulfo-beta-D-fructofuranose, Semaphorin-5A, alpha-D-mannopyranose 著者 Nagy, G.N, Duman, R, Harlos, K, El Omari, K, Wagner, A, Jones, E.Y. 登録日 2023-02-15 公開日 2024-02-28 実験手法 X-RAY DIFFRACTION (2.56 Å) 主引用文献 Semaphorin-5A TSR 3-4 domains in complex with sucrose octasulfate (SOS) To Be Published
8OWB	Crystal structure of Mycobacterium smegmatis CoaB in complex with CTP and 2-(5-bromo-1-(4-hydroxyphenyl)-1H-indol-3-yl)-2-oxoacetic acid 分子名称: 2-[5-bromanyl-1-(4-hydroxyphenyl)indol-3-yl]-2-oxidanylidene-ethanoic acid, CALCIUM ION, CYTIDINE-5'-TRIPHOSPHATE, ... 著者 Mendes, V, Blundell, T.L. 登録日 2023-04-27 公開日 2024-05-08 実験手法 X-RAY DIFFRACTION (2.25 Å) 主引用文献 Development of new inhibitors against M. tuberculosis CoaBC using a fragment based approach. To Be Published
8CK9	DyP-type peroxidase from Thermobifida halotolerans 分子名称: NITRATE ION, PROTOPORPHYRIN IX CONTAINING FE, Peroxidase 著者 Pupart, H, Lukk, T. 登録日 2023-02-14 公開日 2024-02-28 最終更新日 2024-03-06 実験手法 X-RAY DIFFRACTION (1.6 Å) 主引用文献 Dye-decolorizing peroxidase of Thermobifida halotolerance displays complex kinetics with both substrate inhibition and apparent positive cooperativity. Arch.Biochem.Biophys., 754, 2024
6LOI	Crystal structure of Enterococcus faecalis Undecaprenyl pyrophosphate synthase(EfaUPPS) 分子名称: Isoprenyl transferase 著者 Lin, W, Wang, C.Y, Li, W.J, Wang, F.L. 登録日 2020-01-05 公開日 2020-06-17 最終更新日 2023-11-29 実験手法 X-RAY DIFFRACTION (2.503 Å) 主引用文献 Investigations into the Antibacterial Mechanism of Action of Viridicatumtoxins. Acs Infect Dis., 6, 2020
6ULP	BRD3-BD2 in complex with the cyclic peptide 3.2_3 分子名称: Bromodomain-containing protein 3, Cyclic peptide 3.2_3 著者 Patel, K, Walshe, J.L, Walport, L.J, Mackay, J.P. 登録日 2019-10-08 公開日 2020-08-19 最終更新日 2023-11-15 実験手法 X-RAY DIFFRACTION (2.8 Å) 主引用文献 Cyclic peptides can engage a single binding pocket through highly divergent modes. Proc.Natl.Acad.Sci.USA, 117, 2020
7VQC	Structure of MA1831 from Methanosarcina acetivorans in complex with pyrophosphate 分子名称: Di-trans-poly-cis-decaprenylcistransferase, PYROPHOSPHATE 2-, SULFATE ION 著者 Zhang, L.L, Chen, C.C, Liu, W.D, Huang, J.W, Zhang, X.W, Liu, B.B, Guo, R.T. 登録日 2021-10-19 公開日 2022-08-31 最終更新日 2023-11-29 実験手法 X-RAY DIFFRACTION (2.45 Å) 主引用文献 Structural insights to a bi-functional isoprenyl diphosphate synthase that can catalyze head-to-tail and head-to-middle condensation. Int.J.Biol.Macromol., 214, 2022
8OW5	Crystal structure of Mycobacterium smegmatis CoaB in complex with CTP and 5-methoxy-1H-indole-2-carboxylic acid 分子名称: 5-methoxy-1H-indole-2-carboxylic acid, CALCIUM ION, CYTIDINE-5'-TRIPHOSPHATE, ... 著者 Mendes, V, Blundell, T.L. 登録日 2023-04-27 公開日 2024-05-08 実験手法 X-RAY DIFFRACTION (2.84 Å) 主引用文献 Development of new inhibitors against M. tuberculosis CoaBC using a fragment based approach. To Be Published
7VCG	Thaumatin protected by alginate gel 分子名称: GLYCEROL, L(+)-TARTARIC ACID, Thaumatin I 著者 Muroyama, H, Tomoike, F, Nagae, T, Okada, T. 登録日 2021-09-03 公開日 2022-09-07 最終更新日 2023-11-29 実験手法 X-RAY DIFFRACTION (1.25 Å) 主引用文献 Post-crystallization protection of protein crystals to be published
5ADD	Structure of rat neuronal nitric oxide synthase d597n m336v mutant heme domain in complex with 7-((3-(methylamino)methyl) phenoxy)methyl)quinolin-2-amine 分子名称: 5,6,7,8-TETRAHYDROBIOPTERIN, 7-[[3-(methylaminomethyl)phenoxy]methyl]quinolin-2-amine, ACETATE ION, ... 著者 Li, H, Poulos, T.L. 登録日 2015-08-20 公開日 2015-10-28 最終更新日 2024-05-08 実験手法 X-RAY DIFFRACTION (2.1 Å) 主引用文献 Phenyl Ether- and Aniline-Containing 2-Aminoquinolines as Potent and Selective Inhibitors of Neuronal Nitric Oxide Synthase. J.Med.Chem., 58, 2015
8OWW	B5-5 nanobody bound to SARS-CoV-2 spike RBD (Wuhan) 分子名称: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, B5-5 nanobody, ... 著者 Cornish, K.A.S, Naismith, J.H, Owens, R.J. 登録日 2023-04-28 公開日 2024-05-08 最終更新日 2024-06-19 実験手法 X-RAY DIFFRACTION (1.969 Å) 主引用文献 Structural and functional characterization of nanobodies that neutralize Omicron variants of SARS-CoV-2. Open Biology, 14, 2024
8CO5	The surface-engineered photosensory module (PAS-GAF-PHY) of the bacterial phytochrome Agp1 (AtBphP1) in the Pr form with parallel dimer formation 分子名称: 3-[5-[(4-ethenyl-3-methyl-5-oxidanylidene-pyrrol-2-yl)methyl]-2-[[5-[(3-ethyl-4-methyl-5-oxidanylidene-pyrrol-2-yl)methyl]-3-(3-hydroxy-3-oxopropyl)-4-methyl-1~{H}-pyrrol-2-yl]methyl]-4-methyl-1~{H}-pyrrol-3-yl]propanoic acid, Bacteriophytochrome protein, MAGNESIUM ION 著者 Schmidt, A, Sauthof, L, Krauss, N, Scheerer, P. 登録日 2023-02-27 公開日 2024-03-06 実験手法 X-RAY DIFFRACTION (2.42 Å) 主引用文献 Crystal structures of a bacterial phytochrome exhibiting a group-subgroup relationship reveal pronounced flexibility of the photosensory core module in the Pr state To Be Published
8COD	Crystal structure of S-adenosyl-L-homocysteine hydrolase from Mus musculus in complex with inosine 分子名称: Adenosylhomocysteinase, INOSINE, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, ... 著者 Saleem-Batcha, R, Popadic, D, Koeppl, L.H, Andexer, J.N. 登録日 2023-02-27 公開日 2024-03-06 実験手法 X-RAY DIFFRACTION (2.48 Å) 主引用文献 Crystal structure of S-adenosyl-L-homocysteine hydrolase from Mus musculus in complex with inosine To Be Published
5A3C	Crystal structure of the ADP-ribosylating sirtuin (SirTM) from Streptococcus pyogenes in complex with NAD 分子名称: 1,2-ETHANEDIOL, GLYCINE, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, ... 著者 Rack, J.G.M, Morra, R, Barkauskaite, E, Kraehenbuehl, R, Ariza, A, Qu, Y, Ortmayer, M, Leidecker, O, Cameron, D.R, Matic, I, Peleg, A.Y, Leys, D, Traven, A, Ahel, I. 登録日 2015-05-28 公開日 2015-07-29 最終更新日 2024-05-08 実験手法 X-RAY DIFFRACTION (2.03 Å) 主引用文献 Identification of a Class of Protein Adp-Ribosylating Sirtuins in Microbial Pathogens. Mol.Cell, 59, 2015

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