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3ASP
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BU of 3asp by Molmil
Crystal structure of P domain from Norovirus Funabashi258 stain in the complex with A-antigen
分子名称: Capsid protein, SODIUM ION, alpha-L-fucopyranose-(1-2)-[2-acetamido-2-deoxy-alpha-D-galactopyranose-(1-3)]beta-D-galactopyranose-(1-3)-2-acetamido-2-deoxy-beta-D-glucopyranose
著者Kubota, T, Kumagai, A, Itoh, H, Furukawa, S, Narimatsu, H, Wakita, T, Ishii, K, Takeda, N, Someya, Y, Shirato, H.
登録日2010-12-17
公開日2012-01-25
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Structural basis for the recognition of Lewis antigens by genogroup I norovirus
J.Virol., 86, 2012
3DHS
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BU of 3dhs by Molmil
Mapping metal-binding sites in the catalytic domain of bacterial RNase P RNA
分子名称: OSMIUM ION, RNase P RNA
著者Pace, N.R, Kazantsev, A.V, Krivenko, A.A.
登録日2008-06-18
公開日2009-01-27
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (3.6 Å)
主引用文献Mapping metal-binding sites in the catalytic domain of bacterial RNase P RNA
Rna, 15, 2009
3DLH
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BU of 3dlh by Molmil
Crystal structure of the guide-strand-containing Argonaute protein silencing complex
分子名称: ACETIC ACID, Argonaute, DNA (5'-D(DTP*DGP*DAP*DGP*DGP*DTP*DAP*DGP*DTP*DAP*DGP*DGP*DTP*DTP*DGP*DTP*DAP*DTP*DAP*DGP*DT)-3'), ...
著者Wang, Y, Sheng, G, Patel, D.J.
登録日2008-06-27
公開日2008-09-02
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Structure of the guide-strand-containing argonaute silencing complex.
Nature, 456, 2008
3DM6
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BU of 3dm6 by Molmil
Beta-secretase 1 complexed with statine-based inhibitor
分子名称: 5-[[(2S)-2-[[(3R,4S)-5-(3,5-difluorophenoxy)-3-hydroxy-4-[[3-(methyl-methylsulfonyl-amino)-5-[[(1R)-1-phenylethyl]carbamoyl]phenyl]carbonylamino]pentanoyl]amino]-3-methyl-butanoyl]amino]benzene-1,3-dicarboxylic acid, Beta-secretase 1, ISOPROPYL ALCOHOL
著者Lindberg, J, Borkakoti, N, Nystrom, S.
登録日2008-06-30
公開日2008-12-16
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Design, synthesis and SAR of potent statine-based BACE-1 inhibitors: exploration of P1 phenoxy and benzyloxy residues
Bioorg.Med.Chem., 16, 2008
3DIB
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BU of 3dib by Molmil
Crystal structure of bovine pancreatic ribonuclease A variant (I106A)
分子名称: CHLORIDE ION, Ribonuclease pancreatic, SULFATE ION
著者Kurpiewska, K, Font, J, Ribo, M, Vilanova, M, Lewinski, K.
登録日2008-06-20
公開日2008-07-15
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献X-ray crystallographic studies of RNase A variants engineered at the most destabilizing positions of the main hydrophobic core: further insight into protein stability
Proteins, 77, 2009
3DMP
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BU of 3dmp by Molmil
2.6 A crystal structure of uracil phosphoribosyltransferase from Burkholderia pseudomallei
分子名称: Uracil phosphoribosyltransferase
著者Seattle Structural Genomics Center for Infectious Disease (SSGCID)
登録日2008-07-01
公開日2008-07-15
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献2.6 A crystal structure of uracil phosphoribosyltransferase from Burkholderia pseudomallei
To be Published
3DLT
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BU of 3dlt by Molmil
Snapshots of esterase D from lactobacillus rhamnosus: Insights into a rotation driven catalytic mechanism
分子名称: Esterase D, butanoic acid
著者Bennett, M.D, Delabre, M.-L, Holland, R, Norris, G.E.
登録日2008-06-29
公開日2009-06-30
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Snapshots of esterase D from lactobacillus rhamnosus: Insights into a rotation driven catalytic mechanism
To be Published
3DNJ
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BU of 3dnj by Molmil
The structure of the Caulobacter crescentus ClpS protease adaptor protein in complex with a N-end rule peptide
分子名称: ATP-dependent Clp protease adapter protein clpS, MAGNESIUM ION, synthetic N-end rule peptide
著者Wang, K, Roman-Hernandez, G, Grant, R.A, Sauer, R.T, Baker, T.A.
登録日2008-07-02
公開日2008-11-18
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (1.15 Å)
主引用文献The molecular basis of N-end rule recognition.
Mol.Cell, 32, 2008
3DNX
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BU of 3dnx by Molmil
SPO1766 protein of unknown function from Silicibacter pomeroyi.
分子名称: SODIUM ION, uncharacterized protein SPO1766
著者Osipiuk, J, Mulligan, R, Clancy, S, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
登録日2008-07-02
公開日2008-09-02
最終更新日2017-10-25
実験手法X-RAY DIFFRACTION (1.94 Å)
主引用文献X-ray crystal structure of SPO1766 protein of unknown function from Silicibacter pomeroyi.
To be Published
3DMK
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BU of 3dmk by Molmil
Crystal structure of Down Syndrome Cell Adhesion Molecule (DSCAM) isoform 1.30.30, N-terminal eight Ig domains
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Down Syndrome Cell Adhesion Molecule (DSCAM) isoform 1.30.30, ...
著者Sawaya, M.R, Wojtowicz, W.M, Eisenberg, D, Zipursky, S.L.
登録日2008-07-01
公開日2008-10-07
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (4.19 Å)
主引用文献A double S shape provides the structural basis for the extraordinary binding specificity of Dscam isoforms.
Cell(Cambridge,Mass.), 134, 2008
3DOO
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BU of 3doo by Molmil
Crystal structure of shikimate dehydrogenase from Staphylococcus epidermidis complexed with shikimate
分子名称: (3R,4S,5R)-3,4,5-TRIHYDROXYCYCLOHEX-1-ENE-1-CARBOXYLIC ACID, Shikimate dehydrogenase
著者Han, C, Hu, T, Wu, D, Zhou, J, Shen, X, Qu, D, Jiang, H.
登録日2008-07-05
公開日2009-05-05
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献X-ray crystallographic and enzymatic analyses of shikimate dehydrogenase from Staphylococcus epidermidis
Febs J., 276, 2009
3DOX
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BU of 3dox by Molmil
X-ray structure of HIV-1 protease in situ product complex
分子名称: A PEPTIDE SUBSTRATE-PIV, A PEPTIDE SUBSTRATE-SQNY, HIV-1 PROTEASE
著者Hosur, M.V, Ferrer, J.-L, Das, A, Prashar, V, Bihani, S.
登録日2008-07-07
公開日2008-09-09
最終更新日2024-05-29
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献X-ray structure of HIV-1 protease in situ product complex
Proteins, 74, 2009
3DPR
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BU of 3dpr by Molmil
Human rhinovirus 2 bound to a concatamer of the VLDL receptor module V3
分子名称: CALCIUM ION, LAURIC ACID, LDL-receptor class A 3, ...
著者Querol-Audi, J, Pous, J, Fita, I, Verdaguer, N.
登録日2008-07-09
公開日2009-04-07
最終更新日2017-10-25
実験手法X-RAY DIFFRACTION (3.5 Å)
主引用文献Minor group human rhinovirus-receptor interactions: geometry of multimodular attachment and basis of recognition
Febs Lett., 583, 2009
3DQ1
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BU of 3dq1 by Molmil
Structure of the Yellow Fluorescent Protein Citrine Frozen at 4000 Atmospheres Number 2: Structure 24 in a Series of 26 High Pressure Structures
分子名称: Green fluorescent protein
著者Barstow, B, Kim, C.U.
登録日2008-07-09
公開日2008-09-23
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Alteration of citrine structure by hydrostatic pressure explains the accompanying spectral shift.
Proc.Natl.Acad.Sci.Usa, 105, 2008
3DQA
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BU of 3dqa by Molmil
Structure of the Yellow Fluorescent Protein Citrine Frozen at 1250 Atmospheres Number 4: Structure 14 in a Series of 26 High Pressure Structures
分子名称: Green fluorescent protein
著者Barstow, B, Kim, C.U.
登録日2008-07-09
公開日2008-09-23
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.44 Å)
主引用文献Alteration of citrine structure by hydrostatic pressure explains the accompanying spectral shift.
Proc.Natl.Acad.Sci.Usa, 105, 2008
3DRE
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BU of 3dre by Molmil
Crystal structure of Human Brain-type Creatine Kinase
分子名称: Creatine kinase B-type
著者Moon, J.H, Bong, S.M, Hwang, K.Y, Chi, Y.M.
登録日2008-07-11
公開日2009-03-17
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Structural studies of human brain-type creatine kinase complexed with the ADP-Mg2+-NO3- -creatine transition-state analogue complex
Febs Lett., 582, 2008
3DRM
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BU of 3drm by Molmil
2.2 Angstrom Crystal Structure of Thr114Phe Alpha1-Antitrypsin
分子名称: Alpha-1-antitrypsin
著者Gooptu, B, Nobeli, I, Purkiss, A, Phillips, R.L, Mallya, M, Lomas, D.A, Barrett, T.E.
登録日2008-07-11
公開日2009-03-31
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Crystallographic and cellular characterisation of two mechanisms stabilising the native fold of alpha1-antitrypsin: implications for disease and drug design.
J.Mol.Biol., 387, 2009
3DTU
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BU of 3dtu by Molmil
Catalytic core subunits (I and II) of cytochrome c oxidase from Rhodobacter sphaeroides complexed with deoxycholic acid
分子名称: (3ALPHA,5BETA,12ALPHA)-3,12-DIHYDROXYCHOLAN-24-OIC ACID, CADMIUM ION, CALCIUM ION, ...
著者Qin, L, Mills, D.A, Buhrow, L, Hiser, C, Ferguson-Miller, S.
登録日2008-07-15
公開日2008-09-16
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.15 Å)
主引用文献A conserved steroid binding site in cytochrome C oxidase.
Biochemistry, 47, 2008
3DUT
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BU of 3dut by Molmil
The high salt (phosphate) crystal structure of deoxy hemoglobin E (GLU26LYS) at physiological pH (pH 7.35)
分子名称: Hemoglobin subunit alpha, Hemoglobin subunit beta, PHOSPHATE ION, ...
著者Malashkevich, V.N, Balazs, T.C, Almo, S.C, Hirsch, R.E.
登録日2008-07-17
公開日2009-08-04
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (1.55 Å)
主引用文献The high salt (phosphate) crystal structure of deoxy hemoglobin E (GLU26LYS) at physiological pH (pH 7.35)
To be Published
3E0S
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BU of 3e0s by Molmil
Crystal structure of an uncharacterized protein from Chlorobium tepidum
分子名称: SULFATE ION, uncharacterized protein
著者Bonanno, J.B, Dickey, M, Bain, K.T, Powell, A, Ozyurt, S, Smith, D, Wasserman, S, Sauder, J.M, Burley, S.K, Almo, S.C, New York SGX Research Center for Structural Genomics (NYSGXRC)
登録日2008-07-31
公開日2008-08-26
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.09 Å)
主引用文献Crystal structure of an uncharacterized protein from Chlorobium tepidum
To be Published
3DV4
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BU of 3dv4 by Molmil
Crystal structure of SAG506-01, tetragonal, crystal 1
分子名称: 3-deoxy-alpha-D-manno-oct-2-ulopyranosonic acid, Ig-like protein, MAGNESIUM ION, ...
著者Brooks, C.L, Blackler, R.J, Gerstenbruch, S, Kosma, P, Muller-Loennies, S, Brade, H, Evans, S.V.
登録日2008-07-18
公開日2008-12-02
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Pseudo-symmetry and twinning in crystals of homologous antibody Fv fragments.
Acta Crystallogr.,Sect.D, 64, 2008
3E15
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BU of 3e15 by Molmil
6-phosphogluconolactonase from Plasmodium vivax
分子名称: AZIDE ION, CHLORIDE ION, Glucose-6-phosphate 1-dehydrogenase, ...
著者Arakaki, T.L, Merritt, E.A.
登録日2008-08-01
公開日2008-08-19
最終更新日2019-11-13
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献6-phosphogluconolactonase from Plasmodium vivax
To be Published
3E1V
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BU of 3e1v by Molmil
H. influenzae beta-carbonic anhydrase, variant D44N
分子名称: Carbonic anhydrase 2, ZINC ION
著者Rowlett, R.S, Chapnick, D.A, Shah, S.
登録日2008-08-04
公開日2009-06-02
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Allosteric site variants of Haemophilus influenzae beta-carbonic anhydrase.
Biochemistry, 48, 2009
3DWO
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BU of 3dwo by Molmil
Crystal structure of a Pseudomonas aeruginosa FadL homologue
分子名称: (HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE, Probable outer membrane protein, SULFATE ION
著者Hearn, E.M, Patel, D.R, Lepore, B.W, Indic, M, van den Berg, B.
登録日2008-07-22
公開日2008-12-16
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Transmembrane passage of hydrophobic compounds through a protein channel wall.
Nature, 458, 2009
3DWV
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BU of 3dwv by Molmil
Glutathione peroxidase-type tryparedoxin peroxidase, oxidized form
分子名称: Glutathione peroxidase-like protein
著者Tews, I, Sinning, I, Krauth-Siegel, L.
登録日2008-07-23
公開日2008-08-05
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.41 Å)
主引用文献Structural basis for a distinct catalytic mechanism in Trypanosoma brucei tryparedoxin peroxidase.
J.Biol.Chem., 283, 2008

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