PDB: 97310 件ウェブページステータス検索Chemie searchBIRD

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7SE9	Crystal structure of human Fibrillarin in complex with compound 1 from single soak 分子名称: (5S)-3-methyl-7-(trifluoromethyl)pyrrolo[1,2-a]pyrazin-1(2H)-one, DIMETHYL SULFOXIDE, FORMIC ACID, ... 著者 Shi, Y, El-Deeb, I.M, Masic, V, Hartley-Tassell, L, Maggioni, A, von Itzstein, M, Ve, T. 登録日 2021-09-30 公開日 2022-02-09 最終更新日 2023-10-18 実験手法 X-RAY DIFFRACTION (1.75 Å) 主引用文献 Discovery of Cofactor Competitive Inhibitors against the Human Methyltransferase Fibrillarin. Pharmaceuticals, 15, 2021
7SE6	Crystal structure of human Fibrillarin in ligand-free state 分子名称: FORMIC ACID, rRNA 2'-O-methyltransferase fibrillarin 著者 Shi, Y, El-Deeb, I.M, Masic, V, Hartley-Tassell, L, Maggioni, A, von Itzstein, M, Ve, T. 登録日 2021-09-30 公開日 2022-02-09 最終更新日 2023-10-18 実験手法 X-RAY DIFFRACTION (1.99 Å) 主引用文献 Discovery of Cofactor Competitive Inhibitors against the Human Methyltransferase Fibrillarin. Pharmaceuticals, 15, 2021
7ZHK	GPN-loop GTPase from Sulfolobus acidocaldarius open state (GDP) 分子名称: GTPase, GUANOSINE-5'-DIPHOSPHATE, MAGNESIUM ION 著者 Korf, L, Essen, L.-O. 登録日 2022-04-06 公開日 2023-10-25 最終更新日 2024-05-08 実験手法 X-RAY DIFFRACTION (2.4 Å) 主引用文献 Archaeal GPN-loop GTPases involve a lock-switch-rock mechanism for GTP hydrolysis. Mbio, 14, 2023
6RA4	Human ARGONAUTE-2 PAZ DOMAIN (214-347) IN COMPLEX WITH CGUGACUCU 分子名称: GLYCEROL, Protein argonaute-2, RNA (5'-R(*CP*GP*UP*GP*AP*CP*UP*CP*U)-3') 著者 Rondeau, J.-M, Bourgier, E. 登録日 2019-04-05 公開日 2019-05-08 最終更新日 2024-05-15 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 How to Computationally Stack the Deck for Hit-to-Lead Generation: In Silico Molecular Interaction Energy Profiling for de Novo siRNA Guide Strand Surrogate Selection. J.Chem.Inf.Model., 59, 2019
7W8V	DMSPP- and Trp-bound 6-dimethylallyl tryptophan synthase, IptA 分子名称: 6-dimethylallyltryptophan synthase, DIMETHYLALLYL S-THIOLODIPHOSPHATE, SULFATE ION, ... 著者 Suemune, H, Nagano, S, Tomoya, H. 登録日 2021-12-08 公開日 2022-10-19 最終更新日 2023-11-29 実験手法 X-RAY DIFFRACTION (1.61 Å) 主引用文献 Crystal structures of a 6-dimethylallyltryptophan synthase, IptA: Insights into substrate tolerance and enhancement of prenyltransferase activity. Biochem.Biophys.Res.Commun., 593, 2022
7WTO	Cryo-EM structure of a yeast pre-40S ribosomal subunit - State Tsr1-1 (without Rps2) 分子名称: 18S rRNA, 40S ribosomal protein S1-A, 40S ribosomal protein S11-A, ... 著者 Cheng, J, Lau, B, Thoms, M, Ameismeier, M, Berninghausen, O, Hurt, E, Beckmann, R. 登録日 2022-02-05 公開日 2022-10-19 最終更新日 2024-06-26 実験手法 ELECTRON MICROSCOPY (3.5 Å) 主引用文献 The nucleoplasmic phase of pre-40S formation prior to nuclear export. Nucleic Acids Res., 50, 2022
7WTM	Cryo-EM structure of a yeast pre-40S ribosomal subunit - State Dis-E 分子名称: 18S rRNA, 40S ribosomal protein S1-A, 40S ribosomal protein S11-A, ... 著者 Cheng, J, La Venuta, G, Lau, B, Berninghausen, O, Beckmann, R, Hurt, E. 登録日 2022-02-05 公開日 2022-10-19 最終更新日 2024-06-26 実験手法 ELECTRON MICROSCOPY (3.5 Å) 主引用文献 In vitro structural maturation of an early stage pre-40S particle coupled with U3 snoRNA release and central pseudoknot formation. Nucleic Acids Res., 50, 2022
7WTN	Cryo-EM structure of a yeast pre-40S ribosomal subunit - State Tsr1-1 (with Rps2) 分子名称: 18S rRNA, 18S rRNA (guanine(1575)-N(7))-methyltransferase, 40S ribosomal protein S1-A, ... 著者 Cheng, J, Lau, B, Thoms, M, Ameismeier, M, Berninghausen, O, Hurt, E, Beckmann, R. 登録日 2022-02-05 公開日 2022-10-19 最終更新日 2024-06-26 実験手法 ELECTRON MICROSCOPY (3.4 Å) 主引用文献 The nucleoplasmic phase of pre-40S formation prior to nuclear export. Nucleic Acids Res., 50, 2022
7W8Y	DMSPP- and Naplha-Me-Trp-bound 6-dimethylallyl tryptophan synthase, IptA 分子名称: 2,3-DIHYDROXY-1,4-DITHIOBUTANE, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, 6-dimethylallyltryptophan synthase, ... 著者 Suemune, H, Nagano, S. 登録日 2021-12-08 公開日 2022-10-19 最終更新日 2023-11-29 実験手法 X-RAY DIFFRACTION (1.39 Å) 主引用文献 Crystal structures of a 6-dimethylallyltryptophan synthase, IptA: Insights into substrate tolerance and enhancement of prenyltransferase activity. Biochem.Biophys.Res.Commun., 593, 2022
7WTL	Cryo-EM structure of a yeast pre-40S ribosomal subunit - State Dis-D 分子名称: 18S rRNA, 40S ribosomal protein S1-A, 40S ribosomal protein S11-A, ... 著者 Cheng, J, La Venuta, G, Lau, B, Berninghausen, O, Beckmann, R, Hurt, E. 登録日 2022-02-05 公開日 2022-10-19 最終更新日 2024-06-26 実験手法 ELECTRON MICROSCOPY (3.3 Å) 主引用文献 In vitro structural maturation of an early stage pre-40S particle coupled with U3 snoRNA release and central pseudoknot formation. Nucleic Acids Res., 50, 2022
7WTP	Cryo-EM structure of a yeast pre-40S ribosomal subunit - State Tsr1-2 (with Rps2) 分子名称: 18S rRNA, 18S rRNA (guanine(1575)-N(7))-methyltransferase, 40S ribosomal protein S1-A, ... 著者 Cheng, J, Lau, B, Thoms, M, Ameismeier, M, Berninghausen, O, Hurt, E, Beckmann, R. 登録日 2022-02-05 公開日 2022-10-19 最終更新日 2024-06-26 実験手法 ELECTRON MICROSCOPY (3.8 Å) 主引用文献 The nucleoplasmic phase of pre-40S formation prior to nuclear export. Nucleic Acids Res., 50, 2022
7WTR	Cryo-EM structure of a yeast pre-40S ribosomal subunit - State Tsr1-3 分子名称: 18S rRNA, 18S rRNA (guanine(1575)-N(7))-methyltransferase, 40S ribosomal protein S1-A, ... 著者 Cheng, J, Lau, B, Thoms, M, Ameismeier, M, Berninghausen, O, Hurt, E, Beckmann, R. 登録日 2022-02-05 公開日 2022-10-19 最終更新日 2024-06-26 実験手法 ELECTRON MICROSCOPY (3.5 Å) 主引用文献 The nucleoplasmic phase of pre-40S formation prior to nuclear export. Nucleic Acids Res., 50, 2022
7W8X	DMSPP- and 6-Me-Trp-bound dimethylallyl tryptophan synthase, IptA 分子名称: (2S)-2-azanyl-3-(6-methyl-1H-indol-3-yl)propanoic acid, 6-dimethylallyltryptophan synthase, DIMETHYLALLYL S-THIOLODIPHOSPHATE, ... 著者 Suemune, H, Nagano, S, Tomoya, H. 登録日 2021-12-08 公開日 2022-10-19 最終更新日 2023-11-29 実験手法 X-RAY DIFFRACTION (1.45 Å) 主引用文献 Crystal structures of a 6-dimethylallyltryptophan synthase, IptA: Insights into substrate tolerance and enhancement of prenyltransferase activity. Biochem.Biophys.Res.Commun., 593, 2022
7WTT	Cryo-EM structure of a human pre-40S ribosomal subunit - State RRP12-A1 (with CK1) 分子名称: 18S rRNA, 40S ribosomal protein S11, 40S ribosomal protein S12, ... 著者 Cheng, J, Lau, B, Thoms, M, Ameismeier, M, Berninghausen, O, Hurt, E, Beckmann, R. 登録日 2022-02-05 公開日 2022-10-19 最終更新日 2024-06-26 実験手法 ELECTRON MICROSCOPY (3.1 Å) 主引用文献 The nucleoplasmic phase of pre-40S formation prior to nuclear export. Nucleic Acids Res., 50, 2022
7W8W	DMSPP- and 5-Me-Trp-bound 6-dimethylallyl tryptophan synthase, IptA 分子名称: 5-methyl-L-tryptophan, 6-dimethylallyltryptophan synthase, DIMETHYLALLYL S-THIOLODIPHOSPHATE, ... 著者 Suemune, H, Nagano, S, Tomoya, H. 登録日 2021-12-08 公開日 2022-10-19 最終更新日 2023-11-29 実験手法 X-RAY DIFFRACTION (1.8 Å) 主引用文献 Crystal structures of a 6-dimethylallyltryptophan synthase, IptA: Insights into substrate tolerance and enhancement of prenyltransferase activity. Biochem.Biophys.Res.Commun., 593, 2022
7W8U	Crystal Structure of Indole Prenyltransferase IptA 分子名称: 6-dimethylallyltryptophan synthase 著者 Suemune, H, Nagano, S. 登録日 2021-12-08 公開日 2022-10-19 最終更新日 2023-11-29 実験手法 X-RAY DIFFRACTION (2.25 Å) 主引用文献 Crystal structures of a 6-dimethylallyltryptophan synthase, IptA: Insights into substrate tolerance and enhancement of prenyltransferase activity. Biochem.Biophys.Res.Commun., 593, 2022
7RR3	Structure of Deep-Sea Phage NrS-1 Primase-Polymerase N300 in complex with calcium and ddCTP 分子名称: 2',3'-DIDEOXYCYTIDINE 5'-TRIPHOSPHATE, CALCIUM ION, Primase 著者 Wang, L, Yu, C, Sliz, P. 登録日 2021-08-09 公開日 2022-01-12 最終更新日 2022-01-19 実験手法 X-RAY DIFFRACTION (2.24 Å) 主引用文献 Molecular Dissection of the Primase and Polymerase Activities of Deep-Sea Phage NrS-1 Primase-Polymerase. Front Microbiol, 12, 2021
7UB2	Structure of RecT protein from Listeria innoccua phage A118 in complex with 83-mer annealed duplex 分子名称: DNA (49-mer), RecT 著者 Bell, C.E, Caldwell, B.J. 登録日 2022-03-14 公開日 2022-12-07 最終更新日 2024-06-12 実験手法 ELECTRON MICROSCOPY (3.4 Å) 主引用文献 Structure of a RecT/Red beta family recombinase in complex with a duplex intermediate of DNA annealing. Nat Commun, 13, 2022
7UG6	Cryo-EM structure of pre-60S ribosomal subunit, unmethylated G2922 分子名称: 25S rRNA, 5.8S rRNA, 5S rRNA, ... 著者 Yelland, J.N, Bravo, J.P.K, Black, J.J.B, Taylor, D.W, Johnson, A.W. 登録日 2022-03-24 公開日 2022-12-21 最終更新日 2024-06-12 実験手法 ELECTRON MICROSCOPY (2.9 Å) 主引用文献 A single 2'-O-methylation of ribosomal RNA gates assembly of a functional ribosome. Nat.Struct.Mol.Biol., 30, 2023
6VVE	Legionella pneumophila Lpg2603 kinase bound to IP6, Mn2+, and ADP 分子名称: ADENOSINE-5'-DIPHOSPHATE, Dot/Icm T4SS effector, INOSITOL HEXAKISPHOSPHATE, ... 著者 Tomchick, D.R, Tagliabracci, V.S, Park, B.C. 登録日 2020-02-17 公開日 2020-04-08 最終更新日 2023-11-15 実験手法 X-RAY DIFFRACTION (1.85 Å) 主引用文献 ALegionellaeffector kinase is activated by host inositol hexakisphosphate. J.Biol.Chem., 295, 2020
7R1Y	cryoEM structure of human Nup155 (residues 19-981) 分子名称: Nuclear pore complex protein Nup155 著者 Taniguchi, R, Beck, M. 登録日 2022-02-03 公開日 2022-06-08 最終更新日 2024-07-17 実験手法 ELECTRON MICROSCOPY (3 Å) 主引用文献 AI-based structure prediction empowers integrative structural analysis of human nuclear pores. Science, 376, 2022
6VVD	Legionella pneumophila Lpg2603 kinase bound to IP6 分子名称: Dot/Icm T4SS effector, INOSITOL HEXAKISPHOSPHATE 著者 Tomchick, D.R, Tagliabracci, V.S, Sreelatha, A. 登録日 2020-02-17 公開日 2020-04-08 最終更新日 2023-10-11 実験手法 X-RAY DIFFRACTION (2.65 Å) 主引用文献 ALegionellaeffector kinase is activated by host inositol hexakisphosphate. J.Biol.Chem., 295, 2020
8AHS	Crystal structure of human Ca2+/Calmodulin in complex with melittin 分子名称: CALCIUM ION, Calmodulin-1, Melittin 著者 Durvanger, Z, Harmat, V. 登録日 2022-07-22 公開日 2023-03-22 最終更新日 2024-02-07 実験手法 X-RAY DIFFRACTION (2.48 Å) 主引用文献 Structures of calmodulin-melittin complexes show multiple binding modes lacking classical anchoring interactions. J.Biol.Chem., 299, 2023
8AHT	Crystal structure of Plasmodium falciparum Ca2+/Calmodulin in complex with melittin 分子名称: CALCIUM ION, Calmodulin, Melittin 著者 Durvanger, Z, Harmat, V. 登録日 2022-07-22 公開日 2023-03-22 最終更新日 2024-02-07 実験手法 X-RAY DIFFRACTION (2.2 Å) 主引用文献 Structures of calmodulin-melittin complexes show multiple binding modes lacking classical anchoring interactions. J.Biol.Chem., 299, 2023
8JFS	Phosphate bound acylphosphatase from Deinococcus radiodurans at 1 Angstrom resolution 分子名称: 1,2-ETHANEDIOL, Acylphosphatase, CITRIC ACID, ... 著者 Khakerwala, Z, Kumar, A, Makde, R.D. 登録日 2023-05-18 公開日 2023-06-14 最終更新日 2024-05-29 実験手法 X-RAY DIFFRACTION (1 Å) 主引用文献 Crystal structure of phosphate bound Acyl phosphatase mini-enzyme from Deinococcus radiodurans at 1 angstrom resolution. Biochem.Biophys.Res.Commun., 671, 2023

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