PDB: 45953 件ウェブページステータス検索Chemie searchBIRD

---

6ERQ	Structure of the human mitochondrial transcription initiation complex at the HSP promoter 分子名称: DNA-directed RNA polymerase, mitochondrial, Dimethyladenosine transferase 2, ... 著者 Hillen, H.S, Morozov, Y.I, Sarfallah, A, Temiakov, D, Cramer, P. 登録日 2017-10-18 公開日 2017-11-15 最終更新日 2024-05-01 実験手法 X-RAY DIFFRACTION (4.5 Å) 主引用文献 Structural Basis of Mitochondrial Transcription Initiation. Cell, 171, 2017
1R5U	RNA POLYMERASE II TFIIB COMPLEX 分子名称: DNA-directed RNA polymerase II 13.6 kDa polypeptide, DNA-directed RNA polymerase II 14.2 kDa polypeptide, DNA-directed RNA polymerase II 140 kDa polypeptide, ... 著者 Bushnell, D.A, Westover, K.D, Davis, R, Kornberg, R.D. 登録日 2003-10-13 公開日 2004-02-17 最終更新日 2023-08-23 実験手法 X-RAY DIFFRACTION (4.5 Å) 主引用文献 Structural basis of transcription: an RNA polymerase II-TFIIB cocrystal at 4.5 Angstroms. Science, 303, 2004
6ZHX	Cryo-EM structure of the regulatory linker of ALC1 bound to the nucleosome's acidic patch: nucleosome class. 分子名称: Chromodomain-helicase-DNA-binding protein 1-like, DNA (145-MER) Widom 601 sequence, Histone H2A type 1, ... 著者 Bacic, L, Gaullier, G, Croll, T.I, Deindl, S. 登録日 2020-06-24 公開日 2020-12-23 最終更新日 2024-07-10 実験手法 ELECTRON MICROSCOPY (2.5 Å) 主引用文献 Mechanistic Insights into Regulation of the ALC1 Remodeler by the Nucleosome Acidic Patch. Cell Rep, 33, 2020
6FLP	CryoEM structure of E.coli RNA polymerase paused elongation complex without RNA hairpin bound to NusA 分子名称: DNA (30-MER), DNA (39-MER), DNA-directed RNA polymerase subunit alpha, ... 著者 Guo, X, Weixlbaumer, A. 登録日 2018-01-26 公開日 2018-03-07 最終更新日 2024-05-15 実験手法 ELECTRON MICROSCOPY (4.1 Å) 主引用文献 Structural Basis for NusA Stabilized Transcriptional Pausing. Mol. Cell, 69, 2018
6ZHY	Cryo-EM structure of the regulatory linker of ALC1 bound to the nucleosome's acidic patch: hexasome class. 分子名称: Chromodomain-helicase-DNA-binding protein 1-like, DNA (110-MER) Widom 601 sequence, Histone H2A type 1, ... 著者 Bacic, L, Gaullier, G, Deindl, S. 登録日 2020-06-24 公開日 2020-12-23 最終更新日 2024-07-10 実験手法 ELECTRON MICROSCOPY (3 Å) 主引用文献 Mechanistic Insights into Regulation of the ALC1 Remodeler by the Nucleosome Acidic Patch. Cell Rep, 33, 2020
6ERP	Structure of the human mitochondrial transcription initiation complex at the LSP promoter 分子名称: DNA-directed RNA polymerase, mitochondrial, Dimethyladenosine transferase 2, ... 著者 Hillen, H.S, Morozov, Y.I, Sarfallah, A, Temiakov, D, Cramer, P. 登録日 2017-10-18 公開日 2017-11-15 最終更新日 2024-05-01 実験手法 X-RAY DIFFRACTION (4.502 Å) 主引用文献 Structural Basis of Mitochondrial Transcription Initiation. Cell, 171, 2017
1TWF	RNA polymerase II complexed with UTP at 2.3 A resolution 分子名称: DNA-directed RNA polymerase II 13.6 kDa polypeptide, DNA-directed RNA polymerase II 14.2 kDa polypeptide, DNA-directed RNA polymerase II 140 kDa polypeptide, ... 著者 Westover, K.D, Bushnell, D.A, Kornberg, R.D. 登録日 2004-06-30 公開日 2004-11-16 最終更新日 2023-08-23 実験手法 X-RAY DIFFRACTION (2.3 Å) 主引用文献 Structural basis of transcription: nucleotide selection by rotation in the RNA polymerase II active center. Cell(Cambridge,Mass.), 119, 2004
3RB3	Dpo4 extension ternary complex with 3'-terminal primer A base opposite the 1-methylguanine (m1g) lesion 分子名称: 2'-DEOXYGUANOSINE-5'-TRIPHOSPHATE, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, CALCIUM ION, ... 著者 Rechkoblit, O, Patel, D.J. 登録日 2011-03-28 公開日 2011-06-15 最終更新日 2023-09-13 実験手法 X-RAY DIFFRACTION (2.8 Å) 主引用文献 Implications for damage recognition during Dpo4-mediated mutagenic bypass of m1G and m3C lesions. Structure, 19, 2011
3RBD	Dpo4 extension ternary complex with 3'-terminal primer C base opposite the 3-methylcytosine (m3c) lesion 分子名称: 2'-DEOXYGUANOSINE-5'-TRIPHOSPHATE, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, CALCIUM ION, ... 著者 Rechkoblit, O, Patel, D.J. 登録日 2011-03-29 公開日 2011-06-15 最終更新日 2023-09-13 実験手法 X-RAY DIFFRACTION (2.502 Å) 主引用文献 Implications for damage recognition during Dpo4-mediated mutagenic bypass of m1G and m3C lesions. Structure, 19, 2011
3RAX	Dpo4 extension ternary complex with 3'-terminal primer T base opposite the 1-methylguanine (M1G) lesion 分子名称: 2'-DEOXYGUANOSINE-5'-TRIPHOSPHATE, CALCIUM ION, DNA (5'-D(*CP*CP*TP*AP*AP*CP*(MG1)P*CP*TP*AP*CP*CP*AP*TP*CP*CP*AP*AP*CP*C)-3'), ... 著者 Rechkoblit, O, Patel, D.J. 登録日 2011-03-28 公開日 2011-06-15 最終更新日 2023-09-13 実験手法 X-RAY DIFFRACTION (1.891 Å) 主引用文献 Implications for damage recognition during Dpo4-mediated mutagenic bypass of m1G and m3C lesions. Structure, 19, 2011
1TWC	RNA polymerase II complexed with GTP 分子名称: DNA-DIRECTED RNA POLYMERASE II 14.2KD POLYPEPTIDE, DNA-directed RNA polymerase II 13.6 kDa polypeptide, DNA-directed RNA polymerase II 140 kDa polypeptide, ... 著者 Westover, K.D, Bushnell, D.A, Kornberg, R.D. 登録日 2004-06-30 公開日 2004-11-16 最終更新日 2023-08-23 実験手法 X-RAY DIFFRACTION (3 Å) 主引用文献 Structural basis of transcription: nucleotide selection by rotation in the RNA polymerase II active center. Cell(Cambridge,Mass.), 119, 2004
3RB4	Dpo4 extension ternary complex with 3'-terminal primer G base opposite the 3-methylcytosine (m3c) lesion 分子名称: 2'-DEOXYGUANOSINE-5'-TRIPHOSPHATE, CALCIUM ION, DNA (5'-D(*C*CP*TP*AP*AP*CP*(ME6)P*CP*TP*AP*CP*CP*AP*TP*CP*CP*AP*AP*CP*C)-3'), ... 著者 Rechkoblit, O, Patel, D.J. 登録日 2011-03-28 公開日 2011-06-15 最終更新日 2023-09-13 実験手法 X-RAY DIFFRACTION (2.805 Å) 主引用文献 Implications for damage recognition during Dpo4-mediated mutagenic bypass of m1G and m3C lesions. Structure, 19, 2011
3RBE	Dpo4 extension ternary complex with 3'-terminal primer t base opposite the 3-methylcytosine (m3c) lesion 分子名称: 2'-DEOXYGUANOSINE-5'-TRIPHOSPHATE, CALCIUM ION, DNA (5'-D(*C*CP*TP*AP*AP*CP*(ME6)P*CP*TP*AP*CP*CP*AP*TP*CP*CP*AP*AP*CP*C)-3'), ... 著者 Rechkoblit, O, Patel, D.J. 登録日 2011-03-29 公開日 2011-06-15 最終更新日 2023-09-13 実験手法 X-RAY DIFFRACTION (2.8 Å) 主引用文献 Implications for damage recognition during Dpo4-mediated mutagenic bypass of m1G and m3C lesions. Structure, 19, 2011
3RB0	Dpo4 extension ternary complex with 3'-terminal primer G base opposite the 1-methylguanine (M1G) lesion 分子名称: 2'-DEOXYGUANOSINE-5'-TRIPHOSPHATE, CALCIUM ION, DNA (5'-D(*C*CP*TP*AP*AP*CP*(MG1)P*CP*TP*AP*CP*CP*AP*TP*CP*CP*AP*AP*CP*C)-3'), ... 著者 Rechkoblit, O, Patel, D.J. 登録日 2011-03-28 公開日 2011-06-15 最終更新日 2023-09-13 実験手法 X-RAY DIFFRACTION (3.225 Å) 主引用文献 Implications for damage recognition during Dpo4-mediated mutagenic bypass of m1G and m3C lesions. Structure, 19, 2011
3RB6	Dpo4 extension ternary complex with 3'-terminal primer A base opposite the 3-methylcytosine (m3c) lesion 分子名称: 2'-DEOXYGUANOSINE-5'-TRIPHOSPHATE, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, CALCIUM ION, ... 著者 Rechkoblit, O, Patel, D.J. 登録日 2011-03-28 公開日 2011-06-15 最終更新日 2023-09-13 実験手法 X-RAY DIFFRACTION (2.7 Å) 主引用文献 Implications for damage recognition during Dpo4-mediated mutagenic bypass of m1G and m3C lesions. Structure, 19, 2011
7U0J	Structure of 162bp LIN28b nucleosome 分子名称: DNA (162-MER), Histone H2A type 2-C, Histone H2B type 2-E, ... 著者 Lian, T, Guan, R, Bai, Y. 登録日 2022-02-18 公開日 2023-06-28 実験手法 ELECTRON MICROSCOPY (2.7 Å) 主引用文献 Structural mechanism of LIN28B nucleosome targeting by OCT4. Mol.Cell, 83, 2023
8SPS	High resolution structure of ESRRB nucleosome bound OCT4 at site a and site b 分子名称: DNA (168-MER), Histone H2A type 2-C, Histone H2B type 2-E, ... 著者 Lian, T, Guan, R, Bai, Y. 登録日 2023-05-03 公開日 2023-06-28 実験手法 ELECTRON MICROSCOPY (3 Å) 主引用文献 Structural mechanism of LIN28B nucleosome targeting by OCT4. Mol.Cell, 83, 2023
8SPU	Structure of ESRRB nucleosome bound OCT4 at site c 分子名称: DNA (168-MER), Histone H2A type 2-C, Histone H2B type 2-E, ... 著者 Lian, T, Guan, R, Bai, Y. 登録日 2023-05-03 公開日 2023-06-28 最終更新日 2024-02-07 実験手法 ELECTRON MICROSCOPY (2.8 Å) 主引用文献 Structural mechanism of LIN28B nucleosome targeting by OCT4. Mol.Cell, 83, 2023
4TMA	Crystal structure of gyrase bound to its inhibitor YacG 分子名称: DNA gyrase inhibitor YacG, DNA gyrase subunit A, DNA gyrase subunit B, ... 著者 Vos, S.M, Lyubimov, A.Y, Hershey, D.M, Schoeffler, A.J, Berger, J.M. 登録日 2014-05-31 公開日 2014-07-23 最終更新日 2023-09-27 実験手法 X-RAY DIFFRACTION (3.3 Å) 主引用文献 Direct control of type IIA topoisomerase activity by a chromosomally encoded regulatory protein. Genes Dev., 28, 2014
3GTL	Backtracked RNA polymerase II complex with 13mer with G<>U mismatch 分子名称: DNA (28-MER), DNA (5'-D(*CP*TP*GP*CP*TP*TP*AP*TP*CP*GP*GP*TP*AP*G)-3'), DNA-directed RNA polymerase II subunit RPB1, ... 著者 Wang, D, Bushnell, D.A, Huang, X, Westover, K.D, Levitt, M, Kornberg, R.D. 登録日 2009-03-27 公開日 2009-06-09 最終更新日 2023-09-06 実験手法 X-RAY DIFFRACTION (3.38 Å) 主引用文献 Structural basis of transcription: backtracked RNA polymerase II at 3.4 angstrom resolution. Science, 324, 2009
7OGP	Structure of the apo-state of the bacteriophage PhiKZ non-virion RNA polymerase - class including clamp 分子名称: DNA-directed RNA polymerase, PHIKZ055, PHIKZ068, ... 著者 de Martin Garrido, N, Lai Wan Loong, Y.T.E, Yakunina, M, Aylett, C.H.S. 登録日 2021-05-07 公開日 2021-07-07 最終更新日 2023-11-22 実験手法 ELECTRON MICROSCOPY (3.3 Å) 主引用文献 Structure of the bacteriophage PhiKZ non-virion RNA polymerase. Nucleic Acids Res., 49, 2021
8CRO	Cryo-EM structure of Pyrococcus furiosus transcription elongation complex 分子名称: DNA Non-Template Strand, DNA Template Strand, DNA-directed RNA polymerase subunit Rpo10, ... 著者 Tarau, D.M, Grunberger, F, Reichelt, R, Heiss, F.B, Pilsl, M, Hausner, W, Engel, C, Grohmann, D. 登録日 2023-03-08 公開日 2024-04-17 最終更新日 2024-06-19 実験手法 ELECTRON MICROSCOPY (3.1 Å) 主引用文献 Structural basis of archaeal RNA polymerase transcription elongation and Spt4/5 recruitment. Nucleic Acids Res., 52, 2024
6QCG	PCNA complex with Cdt1 N-terminal PIP-box peptide 分子名称: DNA replication factor Cdt1, Proliferating cell nuclear antigen 著者 Perrakis, A, von Castelmur, E. 登録日 2018-12-28 公開日 2019-01-23 実験手法 X-RAY DIFFRACTION (3.4 Å) 主引用文献 Direct binding of Cdt2 to PCNA is important for targeting the CRL4Cdt2E3 ligase activity to Cdt1. Life Sci Alliance, 1, 2018
3KET	Crystal structure of a Rex-family transcriptional regulatory protein from Streptococcus agalactiae bound to a palindromic operator 分子名称: DNA (5'-D(*AP*AP*TP*TP*GP*TP*GP*AP*AP*AP*T)-3'), DNA (5'-D(P*AP*TP*TP*TP*CP*AP*CP*AP*AP*TP*T)-3'), MAGNESIUM ION, ... 著者 Thiyagarajan, S, Logan, D, von Wachenfeldt, C. 登録日 2009-10-26 公開日 2010-11-10 最終更新日 2023-11-01 実験手法 X-RAY DIFFRACTION (2.4 Å) 主引用文献 NAD+ pool depletion as a signal for the Rex regulon involved in Streptococcus agalactiae virulence. Plos Pathog., 17, 2021
6YI2	UvrD helicase RNA polymerase interactions are governed by UvrDs carboxy terminal Tudor domain. 分子名称: DNA helicase 著者 Kawale, A.A, Burmann, B.B. 登録日 2020-03-31 公開日 2020-10-21 最終更新日 2024-06-19 実験手法 SOLUTION NMR 主引用文献 UvrD helicase-RNA polymerase interactions are governed by UvrD's carboxy-terminal Tudor domain. Commun Biol, 3, 2020

<509510511512513514515516517518519520521522523524>