Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

3DHB
DownloadVisualize
BU of 3dhb by Molmil
1.4 Angstrom Structure of N-Acyl Homoserine Lactone Hydrolase with the Product N-Hexanoyl-L-Homoserine Bound at The Catalytic Metal Center
分子名称: GLYCEROL, N-Acyl Homoserine Lactone Hydrolase, N-hexanoyl-L-homoserine, ...
著者Liu, D, Momb, J, Thomas, P.W, Moulin, A, Petsko, G.A, Fast, W, Ringe, D.
登録日2008-06-17
公開日2008-07-29
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献Mechanism of the quorum-quenching lactonase (AiiA) from Bacillus thuringiensis. 1. Product-bound structures.
Biochemistry, 47, 2008
3DHC
DownloadVisualize
BU of 3dhc by Molmil
1.3 Angstrom Structure of N-Acyl Homoserine Lactone Hydrolase with the Product N-Hexanoyl-L-Homocysteine Bound to The catalytic Metal Center
分子名称: GLYCEROL, N-Acyl Homoserine Lactone Hydrolase, N-hexanoyl-L-homocysteine, ...
著者Liu, D, Momb, J, Thomas, P.W, Moulin, A, Petsko, G.A, Fast, W, Ringe, D.
登録日2008-06-17
公開日2008-07-29
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.3 Å)
主引用文献Mechanism of the quorum-quenching lactonase (AiiA) from Bacillus thuringiensis. 1. Product-bound structures.
Biochemistry, 47, 2008
3ESH
DownloadVisualize
BU of 3esh by Molmil
Crystal structure of a probable metal-dependent hydrolase from Staphylococcus aureus. Northeast Structural Genomics target ZR314
分子名称: Protein similar to metal-dependent hydrolase
著者Seetharaman, J, Chen, Y, Wang, H, Janjua, H, Foote, E.L, Xiao, R, Nair, R, Everett, J.K, Acton, T.B, Rost, B, Montelione, G.T, Tong, L, Hunt, J.F, Northeast Structural Genomics Consortium (NESG)
登録日2008-10-06
公開日2008-10-28
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Crystal structure of a probable metal-dependent hydrolase from Staphylococcus aureus. Northeast Structural Genomics target ZR314
To be Published
3F9O
DownloadVisualize
BU of 3f9o by Molmil
Crystal Structure of the Di-Zinc Carbapenemase CphA from Aeromonas Hydrophila
分子名称: Beta-lactamase, CARBONATE ION, CHLORIDE ION, ...
著者Delbruck, H, Hoffmann, K.M.V.
登録日2008-11-14
公開日2009-09-01
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.03 Å)
主引用文献The structure of the dizinc subclass B2 metallo-beta-lactamase CphA reveals that the second inhibitory zinc ion binds in the histidine site
Antimicrob.Agents Chemother., 53, 2009
3FAI
DownloadVisualize
BU of 3fai by Molmil
The Di Zinc Carbapenemase CphA N220G mutant
分子名称: Beta-lactamase, CHLORIDE ION, GLYCEROL, ...
著者Delbruck, H, Hoffmann, K.M.V.
登録日2008-11-17
公開日2009-09-01
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献The structure of the dizinc subclass B2 metallo-beta-lactamase CphA reveals that the second inhibitory zinc ion binds in the histidine site
Antimicrob.Agents Chemother., 53, 2009
3FCZ
DownloadVisualize
BU of 3fcz by Molmil
Adaptive protein evolution grants organismal fitness by improving catalysis and flexibility
分子名称: Beta-lactamase 2, ZINC ION
著者Tomatis, P, Fabiane, S, Simona, F, Carloni, P, Sutton, B, Vila, A.
登録日2008-11-24
公開日2008-12-09
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2.804 Å)
主引用文献Adaptive protein evolution grants organismal fitness by improving catalysis and flexibility.
Proc.Natl.Acad.Sci.USA, 105, 2008
3H3E
DownloadVisualize
BU of 3h3e by Molmil
Crystal structure of Tm1679, A METAL-DEPENDENT HYDROLASE OF THE BETA-LACTAMASE SUPERFAMILY
分子名称: ZINC ION, uncharacterized protein Tm1679
著者Cooper, D.R, Olekhnovitch, N, Derewenda, U, Derewenda, Z.S, Integrated Center for Structure and Function Innovation (ISFI)
登録日2009-04-16
公開日2009-07-14
最終更新日2021-10-13
実験手法X-RAY DIFFRACTION (2.749 Å)
主引用文献Crystal structure of Tm1679, A METAL-DEPENDENT HYDROLASE OF THE BETA-LACTAMASE SUPERFAMILY
To be Published
3I0V
DownloadVisualize
BU of 3i0v by Molmil
Bacillus cereus metallo-beta-lactamase: apo form
分子名称: Beta-lactamase 2
著者Gonzalez, J.M, Buschiazzo, A, Vila, A.J.
登録日2009-06-25
公開日2009-12-29
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Evidence of adaptability in metal coordination geometry and active-site loop conformation among B1 metallo-beta-lactamases .
Biochemistry, 49, 2010
3I11
DownloadVisualize
BU of 3i11 by Molmil
Cobalt-substituted metallo-beta-lactamase from Bacillus cereus
分子名称: Beta-lactamase 2, COBALT (II) ION
著者Gonzalez, J.M, Buschiazzo, A, Vila, A.J.
登録日2009-06-25
公開日2009-12-29
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (1.45 Å)
主引用文献Evidence of adaptability in metal coordination geometry and active-site loop conformation among B1 metallo-beta-lactamases .
Biochemistry, 49, 2010
3I13
DownloadVisualize
BU of 3i13 by Molmil
Bacillus cereus Zn-dependent metallo-beta-lactamase at pH 5.8
分子名称: Beta-lactamase 2, ZINC ION
著者Gonzalez, J.M, Buschiazzo, A, Vila, A.J.
登録日2009-06-25
公開日2009-12-29
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (1.74 Å)
主引用文献Evidence of adaptability in metal coordination geometry and active-site loop conformation among B1 metallo-beta-lactamases .
Biochemistry, 49, 2010
3I14
DownloadVisualize
BU of 3i14 by Molmil
Cobalt-substituted metallo-beta-lactamase from Bacillus cereus: residue Cys168 partially oxidized
分子名称: Beta-lactamase 2, COBALT (II) ION, GLYCEROL
著者Gonzalez, J.M, Buschiazzo, A, Vila, A.J.
登録日2009-06-25
公開日2009-12-29
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (1.55 Å)
主引用文献Evidence of adaptability in metal coordination geometry and active-site loop conformation among B1 metallo-beta-lactamases .
Biochemistry, 49, 2010
3I15
DownloadVisualize
BU of 3i15 by Molmil
Cobalt-substituted metallo-beta-lactamase from Bacillus cereus: residue Cys168 fully oxidized
分子名称: Beta-lactamase 2, COBALT (II) ION
著者Gonzalez, J.M, Buschiazzo, A, Vila, A.J.
登録日2009-06-25
公開日2009-12-29
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (1.55 Å)
主引用文献Evidence of adaptability in metal coordination geometry and active-site loop conformation among B1 metallo-beta-lactamases .
Biochemistry, 49, 2010
3IDZ
DownloadVisualize
BU of 3idz by Molmil
Crystal Structure of S378Q mutant TTHA0252 from Thermus thermophilus HB8
分子名称: CITRATE ANION, Ribonuclease TTHA0252, SULFATE ION, ...
著者Ishikawa, H, Nakagawa, N, Kuramitsu, S, Yokoyama, S, Masui, R, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2009-07-22
公開日2009-08-04
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Crystal Structure of S378Q mutant TTHA0252 from Thermus thermophilus HB8
To be Published
3IE0
DownloadVisualize
BU of 3ie0 by Molmil
Crystal Structure of S378Y mutant TTHA0252 from Thermus thermophilus HB8
分子名称: CITRATE ANION, Ribonuclease TTHA0252, SULFATE ION, ...
著者Ishikawa, H, Nakagawa, N, Kuramitsu, S, Yokoyama, S, Masui, R, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2009-07-22
公開日2009-08-04
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.73 Å)
主引用文献Crystal Structure of S378Y mutant TTHA0252 from Thermus thermophilus HB8
To be Published
3IE1
DownloadVisualize
BU of 3ie1 by Molmil
Crystal structure of H380A mutant TTHA0252 from Thermus thermophilus HB8 complexed with RNA
分子名称: CITRATE ANION, RNA (5'-R(P*UP*UP*UP*U)-3'), Ribonuclease TTHA0252, ...
著者Ishikawa, H, Nakagawa, N, Kuramitsu, S, Yokoyama, S, Masui, R, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2009-07-22
公開日2009-08-04
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.85 Å)
主引用文献Crystal structure of H380A mutant TTHA0252 from Thermus thermophilus HB8 complexed with RNA
To be Published
3IE2
DownloadVisualize
BU of 3ie2 by Molmil
Crystal Structure of H400V mutant TTHA0252 from Thermus thermophilus HB8
分子名称: 2-[BIS-(2-HYDROXY-ETHYL)-AMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Ribonuclease TTHA0252, SULFATE ION, ...
著者Ishikawa, H, Nakagawa, N, Kuramitsu, S, Yokoyama, S, Masui, R, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2009-07-22
公開日2009-08-04
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Crystal Structure of H400V mutant TTHA0252 from Thermus thermophilus HB8
To be Published
3IEK
DownloadVisualize
BU of 3iek by Molmil
Crystal Structure of native TTHA0252 from Thermus thermophilus HB8
分子名称: CITRATE ANION, Ribonuclease TTHA0252, SULFATE ION, ...
著者Ishikawa, H, Nakagawa, N, Kuramitsu, S, Yokoyama, S, Masui, R.
登録日2009-07-22
公開日2010-07-28
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.05 Å)
主引用文献Crystal Structure of native TTHA0252 from Thermus thermophilus HB8
To be Published
3IEL
DownloadVisualize
BU of 3iel by Molmil
Crystal Structure of TTHA0252 from Thermus thermophilus HB8 complexed with UMP
分子名称: CITRATE ANION, Ribonuclease TTHA0252, SULFATE ION, ...
著者Ishikawa, H, Nakagawa, N, Kuramitsu, S, Yokoyama, S, Masui, R.
登録日2009-07-23
公開日2010-07-28
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.35 Å)
主引用文献Crystal Structure of TTHA0252 from Thermus thermophilus HB8 complexed with UMP
To be Published
3IEM
DownloadVisualize
BU of 3iem by Molmil
Crystal Structure of TTHA0252 from Thermus thermophilus HB8 complexed with RNA analog
分子名称: CITRATE ANION, RNA (5'-R(*(SSU)P*(SSU)P*(SSU)P*(SSU)P*(SSU)P*(SSU))-3'), Ribonuclease TTHA0252, ...
著者Ishikawa, H, Nakagawa, N, Kuramitus, S, Yokoyama, S, Masui, R.
登録日2009-07-23
公開日2010-07-28
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Crystal Structure of TTHA0252 from Thermus thermophilus HB8 complexed with RNA analog
To be Published
3IOF
DownloadVisualize
BU of 3iof by Molmil
Crystal structure of CphA N220G mutant with inhibitor 10a
分子名称: Beta-lactamase, GLYCEROL, SULFATE ION, ...
著者Delbruck, H, Bebrone, C, Hoffmann, K.M.V.
登録日2009-08-14
公開日2010-06-23
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.44 Å)
主引用文献Mercaptophosphonate Compounds as Broad-Spectrum Inhibitors of the Metallo-beta-lactamases
J.Med.Chem., 53, 2010
3IOG
DownloadVisualize
BU of 3iog by Molmil
Crystal structure of CphA N220G mutant with inhibitor 18
分子名称: Beta-lactamase, GLYCEROL, SULFATE ION, ...
著者Delbruck, H, Bebrone, C, Hoffmann, K.M.V.
登録日2009-08-14
公開日2010-06-23
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.41 Å)
主引用文献Mercaptophosphonate Compounds as Broad-Spectrum Inhibitors of the Metallo-beta-lactamases
J.Med.Chem., 53, 2010
3KNR
DownloadVisualize
BU of 3knr by Molmil
Bacillus cereus metallo-beta-lactamase Cys221Asp mutant, 1 mM Zn(II)
分子名称: ACETIC ACID, Beta-lactamase 2, GLYCEROL, ...
著者Medrano Martin, F.J, Gonzalez, J.M, Vila, A.J.
登録日2009-11-12
公開日2010-11-24
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (1.71 Å)
主引用文献Metallo-beta-lactamases withstand low Zn(II) conditions by tuning metal-ligand interactions.
Nat.Chem.Biol., 8, 2012
3KNS
DownloadVisualize
BU of 3kns by Molmil
Bacillus cereus metallo-beta-lactamase Cys221Asp mutant, 20 mM Zn(II)
分子名称: ACETIC ACID, Beta-lactamase 2, GLYCEROL, ...
著者Medrano Martin, F.J, Gonzalez, J.M, Vila, A.J.
登録日2009-11-12
公開日2010-11-24
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (1.58 Å)
主引用文献Metallo-beta-lactamases withstand low Zn(II) conditions by tuning metal-ligand interactions.
Nat.Chem.Biol., 8, 2012
3L6N
DownloadVisualize
BU of 3l6n by Molmil
Crystal structure of metallo-beta-lactamase IND-7
分子名称: SULFATE ION, ZINC ION, metallo-beta-lactamase
著者Yamaguchi, Y, Kurosaki, H, Yamagata, Y.
登録日2009-12-23
公開日2010-04-14
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献Structure of metallo-beta-lactamase IND-7 from a Chryseobacterium indologenes clinical isolate at 1.65-A resolution
J.Biochem., 147, 2010
3LVZ
DownloadVisualize
BU of 3lvz by Molmil
New refinement of the crystal structure of BJP-1, a subclass B3 metallo-beta-lactamase of Bradyrhizobium japonicum
分子名称: Blr6230 protein, ZINC ION
著者Docquier, J.D, Benvenuti, M, Calderone, V, Stoczko, M, Rossolini, G.M, Mangani, S.
登録日2010-02-23
公開日2011-01-12
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献High-resolution crystal structure of the subclass B3 metallo-beta-lactamase BJP-1: rational basis for substrate specificity and interaction with sulfonamides.
Antimicrob.Agents Chemother., 54, 2010

221051

件を2024-06-12に公開中

PDB statisticsPDBj update infoContact PDBjnumon