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4EVD
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Crystal Structure HP-NAP from strain YS29 cadmium loaded (Cocrystallization 50mM)
分子名称: CADMIUM ION, Neutrophil-activating protein
著者Yokoyama, H, Tsuruta, O, Akao, N, Fujii, S.
登録日2012-04-26
公開日2012-06-27
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Crystal structure of Helicobacter pylori neutrophil-activating protein with a di-nuclear ferroxidase center in a zinc or cadmium-bound form
Biochem.Biophys.Res.Commun., 422, 2012
1N1Q
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BU of 1n1q by Molmil
Crystal structure of a Dps protein from Bacillus brevis
分子名称: DPS Protein, MU-OXO-DIIRON
著者Ren, B, Tibbelin, G, Kajino, T, Asami, O, Ladenstein, R.
登録日2002-10-19
公開日2003-05-27
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献The Multi-layered Structure of Dps with a Novel Di-nuclear Ferroxidase Center
J.Mol.Biol., 329, 2003
4EVB
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BU of 4evb by Molmil
Crystal Structure HP-NAP from strain YS39 zinc soaked (20mM)
分子名称: 1,2-ETHANEDIOL, Neutrophil-activating protein, SULFATE ION, ...
著者Yokoyama, H, Tsuruta, O, Akao, N, Fujii, S.
登録日2012-04-26
公開日2012-06-27
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Crystal structure of Helicobacter pylori neutrophil-activating protein with a di-nuclear ferroxidase center in a zinc or cadmium-bound form
Biochem.Biophys.Res.Commun., 422, 2012
4EVE
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BU of 4eve by Molmil
Crystal Structure HP-NAP from strain YS29 in apo form
分子名称: Neutrophil-activating protein, SULFATE ION
著者Yokoyama, H, Tsuruta, O, Akao, N, Fujii, S.
登録日2012-04-26
公開日2012-06-27
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Crystal structure of Helicobacter pylori neutrophil-activating protein with a di-nuclear ferroxidase center in a zinc or cadmium-bound form
Biochem.Biophys.Res.Commun., 422, 2012
1NF6
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BU of 1nf6 by Molmil
X-ray structure of the Desulfovibrio desulfuricans bacterioferritin: the diiron site in different catalytic states ("cycled" structure: reduced in solution and allowed to reoxidise before crystallisation)
分子名称: 1,3,5,8-TETRAMETHYL-PORPHINE-2,4,6,7-TETRAPROPIONIC ACID FERROUS COMPLEX, FE (III) ION, GLYCEROL, ...
著者Macedo, S, Romao, C.V, Mitchell, E, Matias, P.M, Liu, M.Y, Xavier, A.V, LeGall, J, Teixeira, M, Lindley, P, Carrondo, M.A.
登録日2002-12-13
公開日2003-04-01
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2.35 Å)
主引用文献The nature of the di-iron site in the bacterioferritin from Desulfovibrio desulfuricans
NAT.STRUCT.BIOL., 10, 2003
1LB3
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BU of 1lb3 by Molmil
Structure of recombinant mouse L chain ferritin at 1.2 A resolution
分子名称: CADMIUM ION, FERRITIN LIGHT CHAIN 1, GLYCEROL, ...
著者Granier, T, Langlois D'Estaintot, B, Gallois, B, Chevalier, J.-M, Precigoux, G, Santambrogio, P, Arosio, P.
登録日2002-04-02
公開日2003-01-28
最終更新日2023-08-16
実験手法X-RAY DIFFRACTION (1.21 Å)
主引用文献Structural description of the active sites of mouse L-chain ferritin at 1.2A resolution
J.Biol.Inorg.Chem., 8, 2003
1MOJ
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BU of 1moj by Molmil
Crystal structure of an archaeal dps-homologue from Halobacterium salinarum
分子名称: Dps-like ferritin, FE (III) ION, MAGNESIUM ION, ...
著者Zeth, K, Offermann, S, Essen, L.O, Oesterhelt, D.
登録日2002-09-09
公開日2004-04-20
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Iron-oxo clusters biomineralizing on protein surfaces: Structural analysis of Halobacterium salinarum DpsA in its low- and high-iron states.
Proc.Natl.Acad.Sci.USA, 101, 2004
8F4L
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BU of 8f4l by Molmil
Structure of human apoferritin embedded in crystalline ice
分子名称: Ferritin heavy chain
著者Shi, H, Wu, C, Zhang, X.
登録日2022-11-11
公開日2024-06-19
実験手法ELECTRON MICROSCOPY (2.4 Å)
主引用文献Addressing Compressive Deformation of Proteins Embedded in Crystalline Ice
To Be Published
1NFV
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BU of 1nfv by Molmil
X-ray structure of Desulfovibrio desulfuricans bacterioferritin: the diiron centre in different catalytic states (as-isolated structure)
分子名称: 1,3,5,8-TETRAMETHYL-PORPHINE-2,4,6,7-TETRAPROPIONIC ACID FERROUS COMPLEX, 3-HYDROXYPYRUVIC ACID, FE (III) ION, ...
著者Macedo, S, Romao, C.V, Mitchell, E, Matias, P.M, Liu, M.Y, Xavier, A.V, LeGall, J, Teixeira, M, Lindley, P, Carrondo, M.A.
登録日2002-12-16
公開日2003-04-01
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献The nature of the di-iron site in the bacterioferritin from Desulfovibrio desulfuricans
NAT.STRUCT.BIOL., 10, 2003
8FFD
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BU of 8ffd by Molmil
Crystal structure of manganeese bound Dps protein (PA0962) from Pseudomonas aeruginosa (cubic form)
分子名称: L(+)-TARTARIC ACID, MANGANESE (II) ION, Probable dna-binding stress protein
著者Lovell, S, Seibold, S, Battaile, K.P, Rivera, M.
登録日2022-12-08
公開日2023-03-08
最終更新日2024-05-22
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Pseudomonas aeruginosa Dps (PA0962) Functions in H 2 O 2 Mediated Oxidative Stress Defense and Exhibits In Vitro DNA Cleaving Activity.
Int J Mol Sci, 24, 2023
8FF9
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BU of 8ff9 by Molmil
Crystal structure of Apo Dps protein (PA0962) from Pseudomonas aeruginosa (orthorhombic form)
分子名称: CHLORIDE ION, Probable dna-binding stress protein, SODIUM ION, ...
著者Lovell, S, Kashipathy, M.M, Battaile, K.P, Rivera, M.
登録日2022-12-08
公開日2023-03-08
最終更新日2024-05-22
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Pseudomonas aeruginosa Dps (PA0962) Functions in H 2 O 2 Mediated Oxidative Stress Defense and Exhibits In Vitro DNA Cleaving Activity.
Int J Mol Sci, 24, 2023
8FFA
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BU of 8ffa by Molmil
Crystal structure of Apo Dps protein (PA0962) from Pseudomonas aeruginosa (cubic form)
分子名称: Probable dna-binding stress protein
著者Lovell, S, Kashipathy, M.M, Battaile, K.P, Rivera, M.
登録日2022-12-08
公開日2023-03-08
最終更新日2024-05-22
実験手法X-RAY DIFFRACTION (2.15 Å)
主引用文献Pseudomonas aeruginosa Dps (PA0962) Functions in H 2 O 2 Mediated Oxidative Stress Defense and Exhibits In Vitro DNA Cleaving Activity.
Int J Mol Sci, 24, 2023
8FFB
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BU of 8ffb by Molmil
Crystal structure of iron bound Dps protein (PA0962) from Pseudomonas aeruginosa (orthorhombic form)
分子名称: FE (II) ION, Probable dna-binding stress protein
著者Lovell, S, Kashipathy, M.M, Battaile, K.P, Rivera, M.
登録日2022-12-08
公開日2023-03-08
最終更新日2024-05-22
実験手法X-RAY DIFFRACTION (2.25 Å)
主引用文献Pseudomonas aeruginosa Dps (PA0962) Functions in H 2 O 2 Mediated Oxidative Stress Defense and Exhibits In Vitro DNA Cleaving Activity.
Int J Mol Sci, 24, 2023
8FFC
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BU of 8ffc by Molmil
Crystal structure of iron bound Dps protein (PA0962) from Pseudomonas aeruginosa (cubic form)
分子名称: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, FE (II) ION, Probable dna-binding stress protein
著者Lovell, S, Kashipathy, M.M, Battaile, K.P, Rivera, M.
登録日2022-12-08
公開日2023-03-08
最終更新日2024-05-22
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Pseudomonas aeruginosa Dps (PA0962) Functions in H 2 O 2 Mediated Oxidative Stress Defense and Exhibits In Vitro DNA Cleaving Activity.
Int J Mol Sci, 24, 2023
8FA1
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BU of 8fa1 by Molmil
Cryo-EM structure of the SARS-CoV-2 HR1HR2 fusion core complex with N969K mutation
分子名称: Ferritin, Dps family protein and Spike protein S2' chimera, Spike protein S2' HR2
著者Yang, K, Brunger, A.T.
登録日2022-11-25
公開日2023-03-29
最終更新日2024-06-19
実験手法ELECTRON MICROSCOPY (2.51 Å)
主引用文献Structure-based design of a SARS-CoV-2 Omicron-specific inhibitor.
Proc.Natl.Acad.Sci.USA, 120, 2023
8FA2
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BU of 8fa2 by Molmil
Cryo-EM structure of the SARS-CoV-2 Omicron HR1-42G complex
分子名称: Scaffolded Spike protein S2' HR1, Spike protein S2' 42G
著者Yang, K, Brunger, A.T.
登録日2022-11-25
公開日2023-03-29
最終更新日2024-06-19
実験手法ELECTRON MICROSCOPY (2.82 Å)
主引用文献Structure-based design of a SARS-CoV-2 Omicron-specific inhibitor.
Proc.Natl.Acad.Sci.USA, 120, 2023
1L8I
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BU of 1l8i by Molmil
Dna Protection and Binding by E. Coli DPS Protein
分子名称: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, DNA PROTECTION DURING STARVATION PROTEIN, POTASSIUM ION
著者Luo, J, Liu, D, White, M.A, Fox, R.O.
登録日2002-03-20
公開日2003-06-24
最終更新日2023-08-16
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献DNA Protection and Binding by E. Coli Dps Protein
To be Published
4DYX
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BU of 4dyx by Molmil
Crystal Structure of the Cu-adduct of Human H-Ferritin variant 4His-delta C-star
分子名称: CALCIUM ION, COPPER (II) ION, Ferritin heavy chain
著者Tezcan, F.A, Huard, D.J.E.
登録日2012-02-29
公開日2013-01-23
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Re-engineering protein interfaces yields copper-inducible ferritin cage assembly.
Nat.Chem.Biol., 9, 2013
8GY1
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BU of 8gy1 by Molmil
Crystal structure of Ag+ binding to Dendrorhynchus zhejiangensis ferritin
分子名称: Ferritin, GLYCEROL, SILVER ION
著者Ming, T.H, Su, X.R, Huo, C.H.
登録日2022-09-21
公開日2023-03-29
最終更新日2024-05-29
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Structural and Biochemical Characterization of Silver/Copper Binding by Dendrorhynchus zhejiangensis Ferritin.
Polymers (Basel), 15, 2023
4DYU
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BU of 4dyu by Molmil
The crystal structure of DNA starvation/stationary phase protection protein Dps from Yersinia pestis KIM 10
分子名称: DNA protection during starvation protein, SULFATE ION, ZINC ION
著者Tan, K, Gu, M, Kwon, K, Anderson, W.F, Joachimiak, A, Center for Structural Genomics of Infectious Diseases (CSGID)
登録日2012-02-29
公開日2012-03-14
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2.75 Å)
主引用文献The crystal structure of DNA starvation/stationary phase protection protein Dps from Yersinia pestis KIM 10
To be Published
4EVC
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BU of 4evc by Molmil
Crystal Structure HP-NAP from strain YS39 cadmium loaded (Cocrystallization 50mM)
分子名称: CADMIUM ION, Neutrophil-activating protein
著者Yokoyama, H, Tsuruta, O, Akao, N, Fujii, S.
登録日2012-04-26
公開日2012-06-27
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Crystal structure of Helicobacter pylori neutrophil-activating protein with a di-nuclear ferroxidase center in a zinc or cadmium-bound form
Biochem.Biophys.Res.Commun., 422, 2012
1O9R
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BU of 1o9r by Molmil
The X-ray crystal structure of Agrobacterium tumefaciens Dps, a member of the family that protect DNA without binding
分子名称: 1,2-ETHANEDIOL, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, AGROBACTERIUM TUMEFACIENS DPS, ...
著者Ilari, A, Ceci, P, Chiancone, E.
登録日2002-12-18
公開日2003-05-29
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (1.45 Å)
主引用文献The Dps Protein of Agrobacterium Tumefaciens Does not Bind to DNA But Protects It Toward Oxidative Cleavage: X-Ray Crystal Structure, Iron Binding, and Hydroxyl-Radical Scavenging Properties
J.Biol.Chem., 278, 2003
1MFR
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BU of 1mfr by Molmil
CRYSTAL STRUCTURE OF M FERRITIN
分子名称: M FERRITIN, MAGNESIUM ION
著者Ha, Y, Shi, D, Allewell, N.M.
登録日1998-06-18
公開日1999-06-22
最終更新日2024-05-22
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Crystal structure of bullfrog M ferritin at 2.8 A resolution: analysis of subunit interactions and the binuclear metal center
J.Biol.Inorg.Chem., 4, 1999
4DYZ
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BU of 4dyz by Molmil
Crystal Structure of the apo form of Human H-Ferritin variant MIC1
分子名称: CALCIUM ION, COPPER (II) ION, Ferritin heavy chain
著者Tezcan, F.A, Huard, D.J.E.
登録日2012-02-29
公開日2013-01-23
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Re-engineering protein interfaces yields copper-inducible ferritin cage assembly.
Nat.Chem.Biol., 9, 2013
4DZ0
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BU of 4dz0 by Molmil
Crystal structure of the Cu-adduct of human H-Ferritin variant MIC1 labeled with a dansyl fluorophore
分子名称: 5-(1-SULFONAPHTHYL)-ACETYLAMINO-ETHYLAMINE, CALCIUM ION, COPPER (II) ION, ...
著者Tezcan, F.A, Huard, D.J.E.
登録日2012-02-29
公開日2013-01-23
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Re-engineering protein interfaces yields copper-inducible ferritin cage assembly.
Nat.Chem.Biol., 9, 2013

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件を2024-08-07に公開中

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