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6RAU
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BU of 6rau by Molmil
PostS3_Pmar_lig4_WT
分子名称: ADENOSINE MONOPHOSPHATE, ATP-dependent DNA ligase, DNA (5'-D(*AP*TP*TP*GP*CP*GP*AP*CP*CP*CP*CP*AP*CP*TP*AP*TP*CP*GP*GP*AP*A)-3'), ...
著者Leiros, H.K.S, Williamson, A.
登録日2019-04-08
公開日2019-07-10
最終更新日2024-05-01
実験手法X-RAY DIFFRACTION (1.99 Å)
主引用文献Structural intermediates of a DNA-ligase complex illuminate the role of the catalytic metal ion and mechanism of phosphodiester bond formation.
Nucleic Acids Res., 47, 2019
7K72
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BU of 7k72 by Molmil
Structure of DNA ligase A from Mycobacterium tuberculosis bound to NAD
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, CALCIUM ION, DNA ligase A, ...
著者Seattle Structural Genomics Center for Infectious Disease (SSGCID)
登録日2020-09-22
公開日2020-12-02
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.05 Å)
主引用文献Structure of DNA ligase A from Mycobacterium tuberculosis bound to NAD
To Be Published
4LH7
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BU of 4lh7 by Molmil
Crystal structure of a LigA inhibitor
分子名称: 4-aminothieno[3,2-c]pyridine-2,7-dicarboxamide, BETA-NICOTINAMIDE RIBOSE MONOPHOSPHATE, DNA ligase, ...
著者Boriack-Sjodin, P.A, Prince, D.B.
登録日2013-06-30
公開日2013-12-25
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Identification through structure-based methods of a bacterial NAD(+)-dependent DNA ligase inhibitor that avoids known resistance mutations.
Bioorg.Med.Chem.Lett., 24, 2014
4LH6
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BU of 4lh6 by Molmil
Crystal structure of a LigA inhibitor
分子名称: 4-amino-2-bromothieno[3,2-c]pyridine-7-carboxamide, ACETATE ION, BETA-NICOTINAMIDE RIBOSE MONOPHOSPHATE, ...
著者Benenato, K, Wang, H, Mcguire, H.M, Davis, H, Gao, N, Prince, D.B, Jahic, H, Stokes, S.S, Boriack-Sjodin, P.A.
登録日2013-06-30
公開日2013-12-25
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献Identification through structure-based methods of a bacterial NAD(+)-dependent DNA ligase inhibitor that avoids known resistance mutations.
Bioorg.Med.Chem.Lett., 24, 2014
6IMN
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BU of 6imn by Molmil
The crystal structure of AsfvLIG:CT2 complex
分子名称: CHLORIDE ION, DNA (5'-D(*CP*CP*AP*GP*TP*CP*CP*GP*AP*CP*CP*CP*GP*CP*AP*TP*CP*CP*CP*GP*GP*A)-3'), DNA (5'-D(*TP*CP*CP*GP*GP*GP*AP*TP*GP*CP*GP*TP*GP*TP*CP*GP*GP*AP*CP*TP*GP*G)-3'), ...
著者Chen, Y.Q, Gan, J.H.
登録日2018-10-23
公開日2019-02-27
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Structure of the error-prone DNA ligase of African swine fever virus identifies critical active site residues.
Nat Commun, 10, 2019
3BAB
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BU of 3bab by Molmil
Structural Basis for the Inhibition of Bacterial NAD+ Dependent DNA Ligase
分子名称: 7-amino-2-tert-butyl-4-(4-pyrimidin-2-ylpiperazin-1-yl)pyrido[2,3-d]pyrimidine-6-carboxamide, BETA-NICOTINAMIDE RIBOSE MONOPHOSPHATE, DNA ligase, ...
著者Pinko, C.
登録日2007-11-07
公開日2008-11-11
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Structural Basis for the Inhibition of Bacterial NAD+ Dependent DNA Ligase
To be Published
3BAA
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BU of 3baa by Molmil
Structural Basis for the Inhibition of Bacterial NAD+ Dependent DNA Ligase
分子名称: 7-amino-2-tert-butyl-4-{[2-(1H-imidazol-4-yl)ethyl]amino}pyrido[2,3-d]pyrimidine-6-carboxamide, BETA-NICOTINAMIDE RIBOSE MONOPHOSPHATE, DNA ligase, ...
著者Pinko, C.
登録日2007-11-07
公開日2008-11-11
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Structural Basis for the Inhibition of Bacterial NAD+ Dependent DNA Ligase
To be Published
3BA8
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BU of 3ba8 by Molmil
Structural Basis for the Inhibition of Bacterial NAD+ Dependent DNA Ligase
分子名称: 2-amino-7-fluoro-5-oxo-5H-chromeno[2,3-b]pyridine-3-carboxamide, BETA-NICOTINAMIDE RIBOSE MONOPHOSPHATE, DNA ligase, ...
著者Pinko, C.
登録日2007-11-07
公開日2008-11-11
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Structural Basis for the Inhibition of Bacterial NAD+ Dependent DNA Ligase
To be Published
4EFE
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BU of 4efe by Molmil
crystal structure of DNA ligase
分子名称: BETA-NICOTINAMIDE RIBOSE MONOPHOSPHATE, DNA ligase, SULFATE ION, ...
著者Wei, Y, Wang, T, Charifson, P, Xu, W.
登録日2012-03-29
公開日2013-04-03
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献crystal structure of DNA ligase
To be Published
4EEQ
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BU of 4eeq by Molmil
Crystal structure of E. faecalis DNA ligase with inhibitor
分子名称: 4-amino-2-(cyclopentyloxy)pyrimidine-5-carboxamide, BETA-NICOTINAMIDE RIBOSE MONOPHOSPHATE, DNA ligase, ...
著者Wang, T, Charifson, P, Wei, Y.
登録日2012-03-28
公開日2013-04-03
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Design, Synthesis and Activity Evaluation of Potent NAD+ DNA Ligase Inhibitors as Potential Antibacterial Agents.
To be Published
4EFB
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BU of 4efb by Molmil
Crystal structure of DNA ligase
分子名称: 4-amino-2-(cyclopentyloxy)-6-{[(1R,2S)-2-hydroxycyclopentyl]oxy}pyrimidine-5-carboxamide, BETA-NICOTINAMIDE RIBOSE MONOPHOSPHATE, DNA ligase, ...
著者Wei, Y, Wang, T, Charifson, P, Xu, W.
登録日2012-03-29
公開日2013-04-03
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Crystal structure of DNA ligase
To be Published
3SGI
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BU of 3sgi by Molmil
Crystal structure of DNA ligase A BRCT domain deleted mutant of Mycobacterium tuberculosis
分子名称: ADENOSINE MONOPHOSPHATE, DNA ligase
著者Kukshal, V, Ravishankar, R.
登録日2011-06-15
公開日2012-06-20
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (3.5 Å)
主引用文献Crystal Structure of Domain deleted mutant of Mycobacterium tuberculosis NAD+ dependent DNA ligase capture the AMP cofactor in a new state
To be Published
3QWU
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BU of 3qwu by Molmil
Putative ATP-dependent DNA ligase from Aquifex aeolicus.
分子名称: ADENOSINE, CALCIUM ION, DNA ligase, ...
著者Osipiuk, J, Quartey, P, Collart, F, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
登録日2011-02-28
公開日2011-03-16
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2.35 Å)
主引用文献Putative ATP-dependent DNA ligase from Aquifex aeolicus.
To be Published
2IRX
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BU of 2irx by Molmil
Crystal Structure of the Polymerase Domain from Mycobacterium tuberculosis Ligase D with GTP and Manganese.
分子名称: DNA ligase-like protein Rv0938/MT0965, GUANOSINE-5'-TRIPHOSPHATE, MANGANESE (II) ION
著者Brissett, N.C, Pitcher, R.S, Doherty, A.J.
登録日2006-10-16
公開日2007-01-02
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Structure and function of a mycobacterial NHEJ DNA repair polymerase.
J.Mol.Biol., 366, 2007
4RKI
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BU of 4rki by Molmil
Crystal structure of sliding beta clamp from Helicobacter pylori
分子名称: DNA polymerase III subunit beta
著者Satyawali, P, Tarique, K.F, Abdul Rehman, S.A, Gourinath, S.
登録日2014-10-13
公開日2016-01-13
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.05 Å)
主引用文献Structural insight into beta-Clamp and its interaction with DNA Ligase in Helicobacter pylori.
Sci Rep, 6, 2016
4S3I
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BU of 4s3i by Molmil
Crystal structure of beta clamp from Helicobacter pylori
分子名称: DNA polymerase III subunit beta
著者Pandey, P, Tarique, K.F, Abdul Rehman, S.A, Gourinath, S.
登録日2015-01-28
公開日2016-02-03
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.946 Å)
主引用文献Structural insight into beta-Clamp and its interaction with DNA Ligase in Helicobacter pylori.
Sci Rep, 6, 2016
6BKG
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BU of 6bkg by Molmil
Human LigIV catalytic domain with bound DNA-adenylate intermediate in closed conformation
分子名称: 1,2-ETHANEDIOL, ADENOSINE MONOPHOSPHATE, CHLORIDE ION, ...
著者Moon, A.F, Tumbale, P.P, Schellenberg, M.J, Williams, R.S, Williams, J.G, Kunkel, T.A, Pedersen, L.C, Bebenek, B.
登録日2017-11-08
公開日2018-07-18
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.402 Å)
主引用文献Structures of DNA-bound human ligase IV catalytic core reveal insights into substrate binding and catalysis.
Nat Commun, 9, 2018
6BKF
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BU of 6bkf by Molmil
Lysyl-adenylate form of human LigIV catalytic domain with bound DNA substrate in open conformation
分子名称: ADENOSINE MONOPHOSPHATE, DNA (5'-D(*GP*CP*TP*GP*AP*TP*GP*CP*GP*TP*C)-3'), DNA (5'-D(*GP*TP*CP*CP*GP*AP*CP*GP*AP*CP*GP*CP*AP*TP*CP*AP*GP*C)-3'), ...
著者Moon, A.F, Tumbale, P.P, Schellenberg, M.J, Williams, R.S, Williams, J.G, Kunkel, T.A, Pedersen, L.C, Bebenek, B.
登録日2017-11-08
公開日2018-07-18
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (3.25 Å)
主引用文献Structures of DNA-bound human ligase IV catalytic core reveal insights into substrate binding and catalysis.
Nat Commun, 9, 2018
5OP0
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BU of 5op0 by Molmil
Structure of Prim-PolC from Mycobacterium smegmatis
分子名称: DNA polymerase LigD, polymerase domain
著者Brissett, N.C, Doherty, A.J.
登録日2017-08-09
公開日2017-11-15
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.84 Å)
主引用文献DNA Ligase C and Prim-PolC participate in base excision repair in mycobacteria.
Nat Commun, 8, 2017
3RB9
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BU of 3rb9 by Molmil
Crystal structure of the M. tuberculosis beta clamp
分子名称: DNA polymerase III subunit beta
著者Kukshal, V, Ramachandran, R.
登録日2011-03-29
公開日2012-04-04
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献M. tuberculosis Sliding beta-Clamp Does Not Interact Directly with the NAD(+)-Dependent DNA Ligase
Plos One, 7, 2012
2IRY
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BU of 2iry by Molmil
Crystal Structure of the Polymerase Domain from Mycobacterium tuberculosis Ligase D with dGTP and Manganese.
分子名称: 2'-DEOXYGUANOSINE-5'-TRIPHOSPHATE, DNA ligase-like protein Rv0938/MT0965, MANGANESE (II) ION
著者Brissett, N.C, Pitcher, R.S, Doherty, A.J.
登録日2006-10-16
公開日2007-01-02
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (1.78 Å)
主引用文献Structure and function of a mycobacterial NHEJ DNA repair polymerase.
J.Mol.Biol., 366, 2007
2IRU
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BU of 2iru by Molmil
Crystal Structure of the Polymerase Domain from Mycobacterium tuberculosis Ligase D
分子名称: Putative DNA ligase-like protein Rv0938/MT0965
著者Brissett, N.C, Pitcher, R.S, Doherty, A.J.
登録日2006-10-16
公開日2007-01-02
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献Structure and function of a mycobacterial NHEJ DNA repair polymerase.
J.Mol.Biol., 366, 2007
7FB7
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BU of 7fb7 by Molmil
Crystal structure of human UHRF1 TTD in complex with 5-amino-2,4-dimethylpyridine
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, 5-amino-2,4-dimethylpyridine, DIMETHYL SULFOXIDE, ...
著者Kori, S, Arita, K, Yoshimi, S.
登録日2021-07-08
公開日2022-01-05
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.45 Å)
主引用文献Structure-based screening combined with computational and biochemical analyses identified the inhibitor targeting the binding of DNA Ligase 1 to UHRF1.
Bioorg.Med.Chem., 52, 2021
1L7B
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BU of 1l7b by Molmil
Solution NMR Structure of BRCT Domain of T. Thermophilus: Northeast Structural Genomics Consortium Target WR64TT
分子名称: DNA LIGASE
著者Sahota, G, Dixon, B.L, Huang, Y.P, Aramini, J, Monleon, D, Bhattacharya, D, Swapna, G.V.T, Yin, C, Xiao, R, Anderson, S, Tejero, R, Montelione, G.T, Northeast Structural Genomics Consortium (NESG)
登録日2002-03-14
公開日2003-09-16
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献Solution NMR Structure of the Brct Domain from Thermus Thermophilus DNA Ligase
To be Published
8BOT
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BU of 8bot by Molmil
Cryo-EM structure of NHEJ supercomplex(trimer)
分子名称: DNA (24-MER), DNA (27-MER), DNA (28-MER), ...
著者Hardwick, S.W, Chaplin, A.K.
登録日2022-11-15
公開日2023-06-28
最終更新日2023-08-16
実験手法ELECTRON MICROSCOPY (7.76 Å)
主引用文献Cryo-EM structure of a DNA-PK trimer: higher order oligomerisation in NHEJ.
Structure, 31, 2023

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