PDB: 1671 件ウェブページステータス検索Chemie searchBIRD

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1NJG	Nucleotide-free form of an Isolated E. coli Clamp Loader Gamma Subunit 分子名称: DNA polymerase III subunit gamma, SULFATE ION, ZINC ION 著者 Podobnik, M, Weitze, T.F, O'Donnell, M, Kuriyan, J. 登録日 2002-12-30 公開日 2003-04-01 最終更新日 2023-08-16 実験手法 X-RAY DIFFRACTION (2.2 Å) 主引用文献 Nucleotide-Induced Conformational Changes in an Isolated Escherichia coli DNA Polymerase III Clamp Loader Subunit Structure, 11, 2003
6AMS	Crystal structure of the DNA polymerase III subunit beta from Pseudomonas aeruginosa 分子名称: Beta sliding clamp, PHOSPHATE ION 著者 McGrath, A.E, Oakley, A.J. 登録日 2017-08-11 公開日 2017-11-01 最終更新日 2023-10-04 実験手法 X-RAY DIFFRACTION (2.39 Å) 主引用文献 Crystal structures and biochemical characterization of DNA sliding clamps from three Gram-negative bacterial pathogens. J. Struct. Biol., 204, 2018
1NJF	Nucleotide bound form of an isolated E. coli clamp loader gamma subunit 分子名称: ADENOSINE-5'-DIPHOSPHATE, DNA polymerase III subunit gamma, PHOSPHOTHIOPHOSPHORIC ACID-ADENYLATE ESTER, ... 著者 Podobnik, M, Weitze, T.F, O'Donnell, M, Kuriyan, J. 登録日 2002-12-30 公開日 2003-04-08 最終更新日 2024-02-14 実験手法 X-RAY DIFFRACTION (2.3 Å) 主引用文献 Nucleotide-Induced Conformational Changes in an Isolated Escherichia coli DNA Polymerase III Clamp Loader Subunit Structure, 11, 2003
3D1G	Structure of a small molecule inhibitor bound to a DNA sliding clamp 分子名称: DNA polymerase III subunit beta, [(5R)-5-(2,3-dibromo-5-ethoxy-4-hydroxybenzyl)-4-oxo-2-thioxo-1,3-thiazolidin-3-yl]acetic acid 著者 Georgescu, R.E, Yurieva, O, Seung-Sup, K, Kuriyan, J, Kong, X.-P, O'Donnell, M. 登録日 2008-05-05 公開日 2008-07-29 最終更新日 2023-08-30 実験手法 X-RAY DIFFRACTION (1.64 Å) 主引用文献 Structure of a small-molecule inhibitor of a DNA polymerase sliding clamp. Proc.Natl.Acad.Sci.Usa, 105, 2008
3D1E	Crystal structure of E. coli sliding clamp (beta) bound to a polymerase II peptide 分子名称: DNA polymerase III subunit beta, decamer from polymerase II C-terminal 著者 Georgescu, R.E, Yurieva, O, Seung-Sup, K, Kuriyan, J, Kong, X.-P, O'Donnell, M. 登録日 2008-05-05 公開日 2008-07-29 最終更新日 2023-08-30 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 Structure of a small-molecule inhibitor of a DNA polymerase sliding clamp. Proc.Natl.Acad.Sci.Usa, 105, 2008
7D7D	CryoEM structure of gp45-dependent transcription activation complex 分子名称: DNA (nontemplate strand), DNA (template strand), DNA polymerase clamp, ... 著者 Shi, J, Wen, A, Jin, S, Feng, Y. 登録日 2020-10-03 公開日 2021-01-20 最終更新日 2024-03-27 実験手法 ELECTRON MICROSCOPY (4.5 Å) 主引用文献 Transcription activation by a sliding clamp. Nat Commun, 12, 2021
3U5Z	Structure of T4 Bacteriophage clamp loader bound to the T4 clamp, primer-template DNA, and ATP analog 分子名称: ADENOSINE-5'-DIPHOSPHATE, DNA polymerase accessory protein 44, DNA polymerase accessory protein 62, ... 著者 Kelch, B.A, Makino, D.L, O'Donnell, M, Kuriyan, J. 登録日 2011-10-11 公開日 2012-01-04 実験手法 X-RAY DIFFRACTION (3.5 Å) 主引用文献 How a DNA polymerase clamp loader opens a sliding clamp. Science, 334, 2011
3RB9	Crystal structure of the M. tuberculosis beta clamp 分子名称: DNA polymerase III subunit beta 著者 Kukshal, V, Ramachandran, R. 登録日 2011-03-29 公開日 2012-04-04 最終更新日 2024-03-20 実験手法 X-RAY DIFFRACTION (3 Å) 主引用文献 M. tuberculosis Sliding beta-Clamp Does Not Interact Directly with the NAD(+)-Dependent DNA Ligase Plos One, 7, 2012
3U61	Structure of T4 Bacteriophage Clamp Loader Bound To Closed Clamp, DNA and ATP Analog and ADP 分子名称: ADENOSINE-5'-DIPHOSPHATE, DNA polymerase accessory protein 44, DNA polymerase accessory protein 62, ... 著者 Kelch, B.A, Makino, D.L, O'Donnell, M, Kuriyan, J. 登録日 2011-10-11 公開日 2012-01-04 実験手法 X-RAY DIFFRACTION (3.2 Å) 主引用文献 How a DNA polymerase clamp loader opens a sliding clamp. Science, 334, 2011
3U60	Structure of T4 Bacteriophage Clamp Loader Bound To Open Clamp, DNA and ATP Analog 分子名称: ADENOSINE-5'-DIPHOSPHATE, DNA polymerase accessory protein 44, DNA polymerase accessory protein 62, ... 著者 Kelch, B.A, Makino, D.L, O'Donnell, M, Kuriyan, J. 登録日 2011-10-11 公開日 2012-01-04 実験手法 X-RAY DIFFRACTION (3.34 Å) 主引用文献 How a DNA polymerase clamp loader opens a sliding clamp. Science, 334, 2011
1JR3	Crystal Structure of the Processivity Clamp Loader Gamma Complex of E. coli DNA Polymerase III 分子名称: DNA polymerase III subunit gamma, DNA polymerase III, delta subunit, ... 著者 Jeruzalmi, D, O'Donnell, M, Kuriyan, J. 登録日 2001-08-10 公開日 2001-09-26 最終更新日 2024-02-07 実験手法 X-RAY DIFFRACTION (2.7 Å) 主引用文献 Crystal structure of the processivity clamp loader gamma (gamma) complex of E. coli DNA polymerase III. Cell(Cambridge,Mass.), 106, 2001
6PTR	Crystal structure of a DnaN sliding clamp (DNA polymerase III subunit beta) from Bartonella birtlesii bound to griselimycin 分子名称: 1,2-ETHANEDIOL, ACE-MVA-MP8-NZC-LEU-MP8-LEU-MVA-PRO-MLU-GLY, Beta sliding clamp, ... 著者 Seattle Structural Genomics Center for Infectious Disease (SSGCID) 登録日 2019-07-16 公開日 2019-08-07 最終更新日 2023-11-15 実験手法 X-RAY DIFFRACTION (1.75 Å) 主引用文献 Crystal structure of a DnaN sliding clamp (DNA polymerase III subunit beta) from Bartonella birtlesii bound to griselimycin To Be Published
6PTV	Crystal structure of a DnaN sliding clamp (DNA polymerase III subunit beta) from Rickettsia rickettsii bound to griselimycin 分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, ACE-MVA-MP8-NZC-LEU-MP8-LEU-MVA-PRO-MLU-GLY, Beta sliding clamp 著者 Seattle Structural Genomics Center for Infectious Disease (SSGCID) 登録日 2019-07-16 公開日 2019-08-07 最終更新日 2023-11-15 実験手法 X-RAY DIFFRACTION (1.85 Å) 主引用文献 Crystal structure of a DnaN sliding clamp (DNA polymerase III subunit beta) from Rickettsia rickettsii bound to griselimycin To Be Published
4TSZ	Crystal structure of DNA polymerase sliding clamp from Pseudomonas aeruginosa with ligand 分子名称: ACE-GLN-ALC-ASP-LEU-ZCL peptide, DNA polymerase III subunit beta 著者 Olieric, V, Burnouf, D, Ennifar, E, Wolff, P. 登録日 2014-06-19 公開日 2014-09-10 最終更新日 2016-12-21 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Differential Modes of Peptide Binding onto Replicative Sliding Clamps from Various Bacterial Origins. J.Med.Chem., 57, 2014
4K3P	E. coli sliding clamp in complex with AcQLALF 分子名称: (ACE)QLALF, 1,2-ETHANEDIOL, CALCIUM ION, ... 著者 Yin, Z, Oakley, A.J. 登録日 2013-04-11 公開日 2013-05-01 最終更新日 2023-11-08 実験手法 X-RAY DIFFRACTION (2.15 Å) 主引用文献 Structural and Thermodynamic Dissection of Linear Motif Recognition by the E. coli Sliding Clamp J.Med.Chem., 56, 2013
4K3Q	E. coli sliding clamp in complex with AcQLDAF 分子名称: (ACE)QLDAF, CALCIUM ION, DI(HYDROXYETHYL)ETHER, ... 著者 Yin, Z, Oakley, A.J. 登録日 2013-04-11 公開日 2013-05-01 最終更新日 2023-11-08 実験手法 X-RAY DIFFRACTION (1.85 Å) 主引用文献 Structural and Thermodynamic Dissection of Linear Motif Recognition by the E. coli Sliding Clamp J.Med.Chem., 56, 2013
4K3O	E. coli sliding clamp in complex with AcQADLF 分子名称: (ACE)QADLF, 1,2-ETHANEDIOL, CALCIUM ION, ... 著者 Yin, Z, Oakley, A.J. 登録日 2013-04-11 公開日 2013-05-01 最終更新日 2023-11-08 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Structural and Thermodynamic Dissection of Linear Motif Recognition by the E. coli Sliding Clamp J.Med.Chem., 56, 2013
4K3R	E. coli sliding clamp in complex with AcQLDLA 分子名称: (ACE)QLDLA, CALCIUM ION, CHLORIDE ION, ... 著者 Yin, Z, Oakley, A.J. 登録日 2013-04-11 公開日 2013-05-01 最終更新日 2023-11-08 実験手法 X-RAY DIFFRACTION (1.86 Å) 主引用文献 Structural and Thermodynamic Dissection of Linear Motif Recognition by the E. coli Sliding Clamp J.Med.Chem., 56, 2013
4K3S	E. coli sliding clamp in P1 crystal space group 分子名称: CALCIUM ION, DNA polymerase III subunit beta, O-ACETALDEHYDYL-HEXAETHYLENE GLYCOL, ... 著者 Yin, Z, Oakley, A.J. 登録日 2013-04-11 公開日 2013-05-01 最終更新日 2023-11-08 実験手法 X-RAY DIFFRACTION (1.75 Å) 主引用文献 Structural and Thermodynamic Dissection of Linear Motif Recognition by the E. coli Sliding Clamp J.Med.Chem., 56, 2013
3P16	Crystal structure of DNA polymerase III sliding clamp 分子名称: DNA polymerase III subunit beta 著者 Gui, W.J, Lin, S.Q, Chen, Y.Y, Zhang, X.E, Bi, L.J, Jiang, T. 登録日 2010-09-30 公開日 2011-08-24 最終更新日 2023-11-01 実験手法 X-RAY DIFFRACTION (2.89 Å) 主引用文献 Crystal structure of DNA polymerase III beta sliding clamp from Mycobacterium tuberculosis. Biochem.Biophys.Res.Commun., 405, 2011
4N94	E. coli sliding clamp in complex with 3,4-difluorobenzamide 分子名称: 1,2-ETHANEDIOL, 3,4-difluorobenzamide, CALCIUM ION, ... 著者 Yin, Z, Oakley, A.J. 登録日 2013-10-19 公開日 2013-11-06 最終更新日 2023-09-20 実験手法 X-RAY DIFFRACTION (1.73 Å) 主引用文献 Discovery of lead compounds targeting the bacterial sliding clamp using a fragment-based approach. J.Med.Chem., 57, 2014
4N98	E. coli sliding clamp in complex with 4'-fluorobiphenyl-4-carboxylic acid 分子名称: 4'-FLUORO-1,1'-BIPHENYL-4-CARBOXYLIC ACID, CALCIUM ION, CHLORIDE ION, ... 著者 Yin, Z, Oakley, A.J. 登録日 2013-10-19 公開日 2013-11-06 最終更新日 2023-09-20 実験手法 X-RAY DIFFRACTION (1.7 Å) 主引用文献 Discovery of lead compounds targeting the bacterial sliding clamp using a fragment-based approach. J.Med.Chem., 57, 2014
4N9A	E. coli sliding clamp in complex with (R)-6-chloro-2,3,4,9-tetrahydro-1H-carbazole-1-carboxylic acid 分子名称: (1R)-6-chloro-2,3,4,9-tetrahydro-1H-carbazole-1-carboxylic acid, CALCIUM ION, CHLORIDE ION, ... 著者 Yin, Z, Oakley, A.J. 登録日 2013-10-19 公開日 2013-11-06 最終更新日 2023-09-20 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 Discovery of lead compounds targeting the bacterial sliding clamp using a fragment-based approach. J.Med.Chem., 57, 2014
4N97	E. coli sliding clamp in complex with 5-nitroindole 分子名称: 5-nitro-1H-indole, CALCIUM ION, DI(HYDROXYETHYL)ETHER, ... 著者 Yin, Z, Oakley, A.J. 登録日 2013-10-19 公開日 2013-11-06 最終更新日 2023-09-20 実験手法 X-RAY DIFFRACTION (1.97 Å) 主引用文献 Discovery of lead compounds targeting the bacterial sliding clamp using a fragment-based approach. J.Med.Chem., 57, 2014
4N99	E. coli sliding clamp in complex with 6-chloro-2,3,4,9-tetrahydro-1H-carbazole-7-carboxylic acid 分子名称: 6-chloro-2,3,4,9-tetrahydro-1H-carbazole-7-carboxylic acid, CALCIUM ION, DI(HYDROXYETHYL)ETHER, ... 著者 Yin, Z, Oakley, A.J. 登録日 2013-10-19 公開日 2013-11-06 最終更新日 2023-09-20 実験手法 X-RAY DIFFRACTION (2.3 Å) 主引用文献 Discovery of lead compounds targeting the bacterial sliding clamp using a fragment-based approach. J.Med.Chem., 57, 2014

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