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8C4M
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CdaA-Adenosine complex
分子名称: ADENOSINE, CHLORIDE ION, Diadenylate cyclase
著者Neumann, P, Ficner, R.
登録日2023-01-04
公開日2023-06-07
最終更新日2024-06-19
実験手法X-RAY DIFFRACTION (1.51 Å)
主引用文献Computer-aided design of a cyclic di-AMP synthesizing enzyme CdaA inhibitor.
Microlife, 4, 2023
8C4P
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CdaA-compound 7 complex
分子名称: CHLORIDE ION, Diadenylate cyclase, ~{N}-[5-(2-azanyl-1,3-thiazol-4-yl)-4-methyl-1,3-thiazol-2-yl]ethanamide
著者Neumann, P, Ficner, R.
登録日2023-01-04
公開日2023-06-07
最終更新日2024-06-19
実験手法X-RAY DIFFRACTION (1.2 Å)
主引用文献Computer-aided design of a cyclic di-AMP synthesizing enzyme CdaA inhibitor.
Microlife, 4, 2023
5BQX
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Crystal structure of human STING in complex with 3'2'-cGAMP
分子名称: 3'2'-cGAMP, Stimulator of interferon genes protein
著者Wu, J, Zhang, X, Chen, Z.J, Chen, C.
登録日2015-05-29
公開日2015-06-24
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Molecular basis for the specific recognition of the metazoan cyclic GMP-AMP by the innate immune adaptor protein STING.
Proc.Natl.Acad.Sci.USA, 112, 2015
4YP1
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Misting with CDA
分子名称: (2R,3R,3aS,5R,7aR,9R,10R,10aS,12R,14aR)-2,9-bis(6-amino-9H-purin-9-yl)octahydro-2H,7H-difuro[3,2-d:3',2'-j][1,3,7,9,2,8 ]tetraoxadiphosphacyclododecine-3,5,10,12-tetrol 5,12-dioxide, Stimulator of interferon genes protein
著者Chin, K.H, Chen, C.K, Tu, Z.I, Chou, S.H.
登録日2015-03-12
公開日2015-10-07
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2.65 Å)
主引用文献Structural Insights into the Distinct Binding Mode of Cyclic Di-AMP with SaCpaA_RCK.
Biochemistry, 54, 2015
5F29
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Structure of RCK domain with cda
分子名称: (2R,3R,3aS,5R,7aR,9R,10R,10aS,12R,14aR)-2,9-bis(6-amino-9H-purin-9-yl)octahydro-2H,7H-difuro[3,2-d:3',2'-j][1,3,7,9,2,8]tetraoxadiphosphacyclododecine-3,5,10,12-tetrol 5,12-dioxide, Na+/H+ antiporter-like protein
著者Chin, K.H.
登録日2015-12-01
公開日2017-02-01
最終更新日2018-08-08
実験手法X-RAY DIFFRACTION (1.821 Å)
主引用文献Structural Insights into the Distinct Binding Mode of Cyclic Di-AMP with SaCpaA_RCK.
Biochemistry, 54, 2015
4O67
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Human cyclic GMP-AMP synthase (cGAS) in complex with GAMP
分子名称: Cyclic GMP-AMP synthase, ZINC ION, cGAMP
著者Zhang, X, Chen, Z, Zhang, X.W, Chen, Z.J.
登録日2013-12-20
公開日2014-02-05
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.444 Å)
主引用文献The Cytosolic DNA Sensor cGAS Forms an Oligomeric Complex with DNA and Undergoes Switch-like Conformational Changes in the Activation Loop.
Cell Rep, 6, 2014
4O68
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Structure of human cyclic GMP-AMP synthase (cGAS)
分子名称: Cyclic GMP-AMP synthase, ZINC ION
著者Zhang, X, Chen, Z, Zhang, X.W, Chen, Z.J.
登録日2013-12-20
公開日2014-02-05
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.436 Å)
主引用文献The Cytosolic DNA Sensor cGAS Forms an Oligomeric Complex with DNA and Undergoes Switch-like Conformational Changes in the Activation Loop.
Cell Rep, 6, 2014
4O69
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Human cyclic GMP-AMP synthase (cGAS) in complex with sulfate ion
分子名称: Cyclic GMP-AMP synthase, SULFATE ION, ZINC ION
著者Zhang, X, Chen, Z, Zhang, X.W, Chen, Z.J.
登録日2013-12-20
公開日2014-02-05
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.252 Å)
主引用文献The Cytosolic DNA Sensor cGAS Forms an Oligomeric Complex with DNA and Undergoes Switch-like Conformational Changes in the Activation Loop.
Cell Rep, 6, 2014
4O6A
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Mouse cyclic GMP-AMP synthase (cGAS) in complex with DNA
分子名称: Cyclic GMP-AMP synthase, DNA1, DNA2, ...
著者Zhang, X, Chen, Z, Zhang, X.W, Chen, Z.J.
登録日2013-12-20
公開日2014-02-05
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.859 Å)
主引用文献The Cytosolic DNA Sensor cGAS Forms an Oligomeric Complex with DNA and Undergoes Switch-like Conformational Changes in the Activation Loop.
Cell Rep, 6, 2014
4KM5
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X-ray crystal structure of human cyclic GMP-AMP synthase (cGAS)
分子名称: Cyclic GMP-AMP synthase, ZINC ION
著者Kranzusch, P.J, Lee, A.S.Y, Berger, J.M, Doudna, J.A.
登録日2013-05-08
公開日2013-05-29
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.499 Å)
主引用文献Structure of Human cGAS Reveals a Conserved Family of Second-Messenger Enzymes in Innate Immunity.
Cell Rep, 3, 2013
4RLE
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Crystal structure of the c-di-AMP binding PII-like protein DarA
分子名称: (2R,3R,3aS,5R,7aR,9R,10R,10aS,12R,14aR)-2,9-bis(6-amino-9H-purin-9-yl)octahydro-2H,7H-difuro[3,2-d:3',2'-j][1,3,7,9,2,8 ]tetraoxadiphosphacyclododecine-3,5,10,12-tetrol 5,12-dioxide, NICKEL (II) ION, Uncharacterized protein YaaQ
著者Dickmanns, A, Neumann, P, Ficner, R.
登録日2014-10-16
公開日2014-12-03
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.3 Å)
主引用文献Identification, Characterization, and Structure Analysis of the Cyclic di-AMP-binding PII-like Signal Transduction Protein DarA.
J.Biol.Chem., 290, 2015
2YPE
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Catalytic domain of mouse 2',3'-cyclic nucleotide 3'- phosphodiesterase, with mutation H309S, crystallized with 2',3'- cyclic AMP
分子名称: 2', 3'-CYCLIC-NUCLEOTIDE 3'-PHOSPHODIESTERASE, 2',3'- cyclic AMP, ...
著者Myllykoski, M, Raasakka, A, Lehtimaki, M, Han, H, Kursula, P.
登録日2012-10-30
公開日2013-07-10
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Crystallographic Analysis of the Reaction Cycle of 2',3'-Cyclic Nucleotide 3'-Phosphodiesterase, a Unique Member of the 2H Phosphoesterase Family
J.Mol.Biol., 425, 2013
3CF6
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Structure of Epac2 in complex with cyclic-AMP and Rap
分子名称: 6-(6-AMINO-PURIN-9-YL)-2-THIOXO-TETRAHYDRO-2-FURO[3,2-D][1,3,2]DIOXAPHOSPHININE-2,7-DIOL, Rap guanine nucleotide exchange factor (GEF) 4, Ras-related protein Rap-1b, ...
著者Rehmann, H, Arias-Palomo, E, Hadders, M.A, Schwede, F, Llorca, O, Bos, J.L.
登録日2008-03-02
公開日2008-07-29
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Structure of Epac2 in complex with a cyclic AMP analogue and RAP1B
Nature, 455, 2008
1I5Z
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STRUCTURE OF CRP-CAMP AT 1.9 A
分子名称: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, ADENOSINE-3',5'-CYCLIC-MONOPHOSPHATE, CATABOLITE GENE ACTIVATOR PROTEIN
著者White, M.A, Lee, J.C, Fox, R.O.
登録日2001-03-01
公開日2003-06-17
最終更新日2023-08-09
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献The effect of the D53H point mutation on the macroscopic motions of E. coli Cyclic AMP Receptor Protein
To be Published
4XJ6
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Crystal structure of Escherichia coli DncV 3'-deoxy GTP bound form
分子名称: 3'-DEOXY-GUANOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, VC0179-like protein
著者Kato, K, Ishii, R, Ishitani, R, Nureki, O.
登録日2015-01-08
公開日2015-04-29
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2.31 Å)
主引用文献Structural Basis for the Catalytic Mechanism of DncV, Bacterial Homolog of Cyclic GMP-AMP Synthase
Structure, 23, 2015
1I6X
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STRUCTURE OF A STAR MUTANT CRP-CAMP AT 2.2 A
分子名称: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, ADENOSINE-3',5'-CYCLIC-MONOPHOSPHATE, CATABOLITE GENE ACTIVATOR PROTEIN
著者White, M.A, Lee, J.C, Fox, R.O.
登録日2001-03-06
公開日2003-06-17
最終更新日2023-08-09
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献The effect of the D53H point mutation on the macroscopic motions of E. coli Cyclic AMP Receptor Protein
To be Published
1G6N
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2.1 ANGSTROM STRUCTURE OF CAP-CAMP
分子名称: ADENOSINE-3',5'-CYCLIC-MONOPHOSPHATE, CATABOLITE GENE ACTIVATOR PROTEIN
著者Passner, J.M, Schultz, S.C, Steitz, T.A.
登録日2000-11-07
公開日2000-12-15
最終更新日2023-08-09
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Modeling the cAMP-induced allosteric transition using the crystal structure of CAP-cAMP at 2.1 A resolution.
J.Mol.Biol., 304, 2000
2GZW
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Crystal structure of the E.coli CRP-cAMP complex
分子名称: ADENOSINE-3',5'-CYCLIC-MONOPHOSPHATE, Catabolite gene activator
著者Kumarevel, T.S, Tanaka, T, Shinkai, A, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2006-05-12
公開日2007-05-15
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.21 Å)
主引用文献Crystal structure of activated CRP protein from E coli
To be Published
3RPQ
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Domain-domain flexibility leads to allostery within the camp receptor protein (CRP)
分子名称: ADENOSINE-3',5'-CYCLIC-MONOPHOSPHATE, Catabolite gene activator, PHOSPHATE ION
著者Knapp, J, White, M.A, Lee, J.C.
登録日2011-04-27
公開日2012-05-02
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2.61 Å)
主引用文献Domain-Domain Flexibility Leads to Allostery within the Cam Receptor Protein (Crp)
To be Published
3QOP
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Domain-domain flexibility leads to allostery within the camp receptor protein (CRP)
分子名称: ADENOSINE-3',5'-CYCLIC-MONOPHOSPHATE, Catabolite gene activator, GLYCEROL
著者Knapp, J, White, M.A, Lee, J.C.
登録日2011-02-10
公開日2012-04-04
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (1.96 Å)
主引用文献Domain-Domain Flexibility Leads to Allostery within the Camp Receptor Protein (Crp)
To be Published
3ROU
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Domain-domain flexibility leads to allostery within the camp receptor protein (CRP)
分子名称: ADENOSINE-3',5'-CYCLIC-MONOPHOSPHATE, Catabolite gene activator
著者Knapp, J, White, M.A, Lee, J.C.
登録日2011-04-26
公開日2012-05-02
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Domain-Domain Flexibility Leads to Allostery within the Cam Receptor Protein (Crp)
To be Published
3RDI
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Domain-domain flexibility leads to allostery within the camp receptor protein (CRP)
分子名称: ADENOSINE-3',5'-CYCLIC-MONOPHOSPHATE, Catabolite gene activator
著者Knapp, J, White, M.A, Lee, J.C.
登録日2011-04-01
公開日2012-05-02
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2.95 Å)
主引用文献Domain-Domain Flexibility Leads to Allostery within the Cam Receptor Protein (Crp)
To be Published
3RYP
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Domain-domain flexibility leads to allostery within the camp receptor protein (CRP)
分子名称: ADENOSINE-3',5'-CYCLIC-MONOPHOSPHATE, Catabolite gene activator, GLYCEROL
著者Knapp, J, White, M.A, Lee, J.C.
登録日2011-05-11
公開日2012-05-02
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Domain-Domain Flexibility Leads to Allostery within the Cam Receptor Protein (Crp)
To be Published
2BYV
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Structure of the cAMP responsive exchange factor Epac2 in its auto- inhibited state
分子名称: RAP GUANINE NUCLEOTIDE EXCHANGE FACTOR 4
著者Rehmann, H, Wittinghofer, A, Bos, J.L.
登録日2005-08-08
公開日2006-02-02
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Structure of the Cyclic-AMP Responsive Exchange Factor Epac2 in its Auto-Inhibited State
Nature, 439, 2006
6NT7
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Cryo-EM structure of full-length chicken STING in the cGAMP-bound dimeric state
分子名称: Stimulator of interferon genes protein, cGAMP
著者Shang, G, Zhang, C, Chen, Z.J, Bai, X, Zhang, X.
登録日2019-01-28
公開日2019-03-06
最終更新日2024-03-20
実験手法ELECTRON MICROSCOPY (4 Å)
主引用文献Cryo-EM structures of STING reveal its mechanism of activation by cyclic GMP-AMP.
Nature, 567, 2019

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