PDB: 46984 件ウェブページステータス検索Chemie searchBIRD

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7QRG	Structure of the post-fusion complex between precursor membrane ectodomain (prM) and envelope ectodomain protein (E) from tick-borne encephalitis virus 分子名称: Envelope protein E, GLYCEROL, Genome polyprotein 著者 Vaney, M.C, Rouvinski, A, Rey, F.A. 登録日 2022-01-11 公開日 2022-05-25 最終更新日 2024-01-31 実験手法 X-RAY DIFFRACTION (2.8 Å) 主引用文献 Evolution and activation mechanism of the flavivirus class II membrane-fusion machinery. Nat Commun, 13, 2022
7QH7	Cryo-EM structure of the human mtLSU assembly intermediate upon MRM2 depletion - class 4 分子名称: 16S ribosomal RNA, 39S ribosomal protein L10, mitochondrial, ... 著者 Rebelo-Guiomar, P, Pellegrino, S, Dent, K.C, Warren, A.J, Minczuk, M. 登録日 2021-12-10 公開日 2022-05-18 実験手法 ELECTRON MICROSCOPY (2.89 Å) 主引用文献 A late-stage assembly checkpoint of the human mitochondrial ribosome large subunit. Nat Commun, 13, 2022
7QSM	Bovine complex I in lipid nanodisc, Deactive-ligand (composite) 分子名称: 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 1,2-Distearoyl-sn-glycerophosphoethanolamine, Acyl carrier protein, ... 著者 Chung, I, Bridges, H.R, Hirst, J. 登録日 2022-01-13 公開日 2022-05-25 最終更新日 2022-09-28 実験手法 ELECTRON MICROSCOPY (2.3 Å) 主引用文献 Cryo-EM structures define ubiquinone-10 binding to mitochondrial complex I and conformational transitions accompanying Q-site occupancy. Nat Commun, 13, 2022
7OWG	human DEPTOR in a complex with mutant human mTORC1 A1459P 分子名称: DEP domain-containing mTOR-interacting protein, Regulatory-associated protein of mTOR, Serine/threonine-protein kinase mTOR, ... 著者 Heimhalt, M, Berndt, A, Wagstaff, J, Anandapadamanaban, M, Perisic, O, Maslen, S, McLaughlin, S, Yu, W.-H, Masson, G.R, Boland, A, Ni, X, Yamashita, K, Murshudov, G.N, Skehel, M, Freund, S.M, Williams, R.L. 登録日 2021-06-18 公開日 2021-09-08 最終更新日 2024-07-17 実験手法 ELECTRON MICROSCOPY (4.7 Å) 主引用文献 Bipartite binding and partial inhibition links DEPTOR and mTOR in a mutually antagonistic embrace. Elife, 10, 2021
7QSN	Bovine complex I in lipid nanodisc, Deactive-apo 分子名称: 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 1,2-Distearoyl-sn-glycerophosphoethanolamine, Acyl carrier protein, ... 著者 Chung, I, Bridges, H.R, Hirst, J. 登録日 2022-01-13 公開日 2022-05-25 最終更新日 2022-09-28 実験手法 ELECTRON MICROSCOPY (2.81 Å) 主引用文献 Cryo-EM structures define ubiquinone-10 binding to mitochondrial complex I and conformational transitions accompanying Q-site occupancy. Nat Commun, 13, 2022
7QSL	Bovine complex I in lipid nanodisc, Active-apo 分子名称: 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 1,2-Distearoyl-sn-glycerophosphoethanolamine, Acyl carrier protein, ... 著者 Chung, I, Bridges, H.R, Hirst, J. 登録日 2022-01-13 公開日 2022-05-25 最終更新日 2022-09-28 実験手法 ELECTRON MICROSCOPY (2.76 Å) 主引用文献 Cryo-EM structures define ubiquinone-10 binding to mitochondrial complex I and conformational transitions accompanying Q-site occupancy. Nat Commun, 13, 2022
7QRF	Structure of the dimeric complex between precursor membrane ectodomain (prM) and envelope protein ectodomain (E) from tick-borne encephalitis virus 分子名称: 1,2-ETHANEDIOL, 2-{2-[2-(2-{2-[2-(2-ETHOXY-ETHOXY)-ETHOXY]-ETHOXY}-ETHOXY)-ETHOXY]-ETHOXY}-ETHANOL, Envelope protein E, ... 著者 Vaney, M.C, Rouvinski, A, Rey, F.A. 登録日 2022-01-11 公開日 2022-05-25 最終更新日 2024-01-31 実験手法 X-RAY DIFFRACTION (2.28 Å) 主引用文献 Evolution and activation mechanism of the flavivirus class II membrane-fusion machinery. Nat Commun, 13, 2022
7QUR	SARS-CoV-2 Spike with ethylbenzamide-tri-iodo Siallyllactose, C3 symmetry 分子名称: 2,3,5-tris(iodanyl)benzamide, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ... 著者 Naismith, J.H, Yang, Y, Liu, J.W. 登録日 2022-01-18 公開日 2022-06-01 最終更新日 2022-08-03 実験手法 ELECTRON MICROSCOPY (2.27 Å) 主引用文献 Pathogen-sugar interactions revealed by universal saturation transfer analysis. Science, 377, 2022
7QSK	Bovine complex I in lipid nanodisc, Active-Q10 分子名称: 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 1,2-Distearoyl-sn-glycerophosphoethanolamine, Acyl carrier protein, ... 著者 Chung, I, Bridges, H.R, Hirst, J. 登録日 2022-01-13 公開日 2022-05-25 最終更新日 2022-09-28 実験手法 ELECTRON MICROSCOPY (2.84 Å) 主引用文献 Cryo-EM structures define ubiquinone-10 binding to mitochondrial complex I and conformational transitions accompanying Q-site occupancy. Nat Commun, 13, 2022
4X6Z	Yeast 20S proteasome in complex with PR-VI modulator 分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, GLYCEROL, MAGNESIUM ION, ... 著者 Rostankowski, R, Witkowska, J, Borek, D, Otwinowski, Z, Jankowska, E. 登録日 2014-12-09 公開日 2015-12-23 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (2.7 Å) 主引用文献 Crystal structures revealed the common place of binding of low-molecular mass activators with the 20S proteasome To Be Published
7QSO	Bovine complex I in lipid nanodisc, State 3 (Slack) 分子名称: 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 1,2-Distearoyl-sn-glycerophosphoethanolamine, Acyl carrier protein, ... 著者 Chung, I, Bridges, H.R, Hirst, J. 登録日 2022-01-13 公開日 2022-05-25 最終更新日 2022-09-28 実験手法 ELECTRON MICROSCOPY (3.02 Å) 主引用文献 Cryo-EM structures define ubiquinone-10 binding to mitochondrial complex I and conformational transitions accompanying Q-site occupancy. Nat Commun, 13, 2022
7QOO	Structure of the human inner kinetochore CCAN complex 分子名称: Centromere protein C, Centromere protein H, Centromere protein I, ... 著者 Vetter, I.R, Pesenti, M, Raisch, T. 登録日 2021-12-24 公開日 2022-06-08 最終更新日 2024-07-17 実験手法 ELECTRON MICROSCOPY (4.6 Å) 主引用文献 Structure of the human inner kinetochore CCAN complex and its significance for human centromere organization. Mol.Cell, 82, 2022
7QIX	Specific features and methylation sites of a plant ribosome. 40S body ribosomal subunit. 分子名称: 18S rRNA body, 30S ribosomal protein S15, chloroplastic, ... 著者 Cottilli, P, Itoh, Y, Amunts, A. 登録日 2021-12-16 公開日 2022-06-15 最終更新日 2024-04-24 実験手法 ELECTRON MICROSCOPY (2.53 Å) 主引用文献 Cryo-EM structure and rRNA modification sites of a plant ribosome. Plant Commun., 3, 2022
7QIY	Specific features and methylation sites of a plant ribosome. 40S head ribosomal subunit. 分子名称: 1,4-DIAMINOBUTANE, 18S rRNA head, 40S head ribosomal protein eS19, ... 著者 Cottilli, P, Itoh, Y, Amunts, A. 登録日 2021-12-16 公開日 2022-06-15 最終更新日 2024-04-24 実験手法 ELECTRON MICROSCOPY (2.58 Å) 主引用文献 Cryo-EM structure and rRNA modification sites of a plant ribosome. Plant Commun., 3, 2022
4WF1	Crystal structure of the E. coli ribosome bound to negamycin. 分子名称: 16S rRNA, 23S rRNA, 30S ribosomal protein S10, ... 著者 Olivier, N.B, Altman, R.B, Noeske, J, Basarab, G.S, Code, E, Ferguson, A.D, Gao, N, Huang, J, Juette, M.F, Livchak, S, Miller, M.D, Prince, D.B, Cate, J.H.D, Buurman, E.T, Blanchard, S.C. 登録日 2014-09-11 公開日 2014-11-05 最終更新日 2023-12-27 実験手法 X-RAY DIFFRACTION (3.09 Å) 主引用文献 Negamycin induces translational stalling and miscoding by binding to the small subunit head domain of the Escherichia coli ribosome. Proc.Natl.Acad.Sci.USA, 111, 2014
5VFO	Nucleotide-driven Triple-state Remodeling of the AAA-ATPase Channel in the Activated Human 26S Proteasome 分子名称: Proteasome subunit alpha type-1, Proteasome subunit alpha type-2, Proteasome subunit alpha type-3, ... 著者 Zhu, Y, Wang, W.L, Yu, D, Ouyang, Q, Lu, Y, Mao, Y. 登録日 2017-04-08 公開日 2018-07-18 実験手法 ELECTRON MICROSCOPY (3.5 Å) 主引用文献 Structural mechanism for nucleotide-driven remodeling of the AAA-ATPase unfoldase in the activated human 26S proteasome. Nat Commun, 9, 2018
7QGR	Structure of the SmrB-bound E. coli disome - collided 70S ribosome 分子名称: 16S rRNA, 23S rRNA, 30S ribosomal protein S1, ... 著者 Kratzat, H, Buschauer, R, Berninghausen, O, Beckmann, R. 登録日 2021-12-09 公開日 2022-06-22 実験手法 ELECTRON MICROSCOPY (5.7 Å) 主引用文献 Ribosome collisions induce mRNA cleavage and ribosome rescue in bacteria. Nature, 603, 2022
7QIW	Specific features and methylation sites of a plant ribosome. 60S ribosomal subunit. 分子名称: 25S rRNA, 5.8S rRNA, 50S ribosomal protein L22, ... 著者 Cottilli, P, Itoh, Y, Amunts, A. 登録日 2021-12-16 公開日 2022-07-13 最終更新日 2023-11-15 実験手法 ELECTRON MICROSCOPY (2.35 Å) 主引用文献 Cryo-EM structure and rRNA modification sites of a plant ribosome. Plant Commun., 3, 2022
5VOK	Crystal structure of the C7orf59-HBXIP dimer 分子名称: Ragulator complex protein LAMTOR4, Ragulator complex protein LAMTOR5 著者 Rasheed, N, Nascimento, A.F.Z, Bar-Peled, L, Shen, K, Sabatini, D.M, Aparicio, R, Smetana, J.H.C. 登録日 2017-05-03 公開日 2018-05-23 最終更新日 2023-10-04 実験手法 X-RAY DIFFRACTION (2.89 Å) 主引用文献 C7orf59/Lamtor4 phosphorylation and structural flexibility modulate Ragulator assembly. Febs Open Bio, 2019
5VXB	Crystal structure of Caulobacter crescentus ProXp-ala at 1.69 Angstrom 分子名称: ProXp-ala 著者 Foster, M.P, Musier-Forsyth, K, Nakanishi, K, Ma, X. 登録日 2017-05-23 公開日 2017-08-09 最終更新日 2023-10-04 実験手法 X-RAY DIFFRACTION (1.69 Å) 主引用文献 Conformational and chemical selection by a trans-acting editing domain. Proc. Natl. Acad. Sci. U.S.A., 114, 2017
7P3K	Cryo-EM structure of 70S ribosome stalled with TnaC peptide (control) 分子名称: 16S rRNA, 23S rRNA, 30S ribosomal protein S10, ... 著者 Buschauer, R, Komar, T, Becker, T, Berninghausen, O, Cheng, J, Beckmann, R. 登録日 2021-07-08 公開日 2021-10-27 最終更新日 2024-04-24 実験手法 ELECTRON MICROSCOPY (2.9 Å) 主引用文献 Structural basis of l-tryptophan-dependent inhibition of release factor 2 by the TnaC arrest peptide. Nucleic Acids Res., 49, 2021
4WPB	Vascular endothelial growth factor in complex with alpha/beta-VEGF-1 分子名称: Vascular endothelial growth factor A, alpha/beta-VEGF-1 著者 Kreitler, D.F, Checco, J.W, Gellman, S.H, Forest, K.T. 登録日 2014-10-17 公開日 2015-04-15 最終更新日 2024-07-10 実験手法 X-RAY DIFFRACTION (3.11 Å) 主引用文献 Targeting diverse protein-protein interaction interfaces with alpha / beta-peptides derived from the Z-domain scaffold. Proc.Natl.Acad.Sci.USA, 112, 2015
7PD3	Structure of the human mitoribosomal large subunit in complex with NSUN4.MTERF4.GTPBP7 and MALSU1.L0R8F8.mt-ACP 分子名称: 16S rRNA, 39S ribosomal protein L10, mitochondrial, ... 著者 Chandrasekaran, V, Desai, N, Burton, N.O, Yang, H, Price, J, Miska, E.A, Ramakrishnan, V. 登録日 2021-08-04 公開日 2021-11-17 実験手法 ELECTRON MICROSCOPY (3.4 Å) 主引用文献 Visualizing formation of the active site in the mitochondrial ribosome. Elife, 10, 2021
7QGG	Neuronal RNA granules are ribosome complexes stalled at the pre-translocation state 分子名称: 40S ribosomal protein S10, 40S ribosomal protein S11, 40S ribosomal protein S12, ... 著者 Pulk, A, Kipper, K, Mansour, A. 登録日 2021-12-08 公開日 2022-10-26 最終更新日 2024-04-24 実験手法 ELECTRON MICROSCOPY (2.86 Å) 主引用文献 Neuronal RNA granules are ribosome complexes stalled at the pre-translocation state. J.Mol.Biol., 434, 2022
7QIZ	Specific features and methylation sites of a plant 80S ribosome 分子名称: 1,4-DIAMINOBUTANE, 18S, 25S rRNA, ... 著者 Cottilli, P, Itoh, Y, Amunts, A. 登録日 2021-12-16 公開日 2022-08-03 最終更新日 2024-04-24 実験手法 ELECTRON MICROSCOPY (2.38 Å) 主引用文献 Cryo-EM structure and rRNA modification sites of a plant ribosome. Plant Commun., 3, 2022

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