PDB: 71589 件ウェブページステータス検索Chemie searchBIRD

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3FLR	Crystal structure of native octameric SAP-like pentraxin from Limulus polyphemus 分子名称: CALCIUM ION, SAP-like pentraxin 著者 Shrive, A.K, Greenhough, T.J, Armstrong, P.B. 登録日 2008-12-19 公開日 2009-01-20 最終更新日 2023-09-06 実験手法 X-RAY DIFFRACTION (3 Å) 主引用文献 Crystal structures of Limulus SAP-like pentraxin reveal two molecular aggregations. J.Mol.Biol., 386, 2009
3G4X	Crystal Structure of NiSOD Y9F mutant 分子名称: CHLORIDE ION, NICKEL (II) ION, Superoxide dismutase [Ni] 著者 Garman, S.C, Guce, A.I, Herbst, R.W, Bryngelson, P.A, Cabelli, D.E, Higgins, K.A, Ryan, K.C, Maroney, M.J. 登録日 2009-02-04 公開日 2009-04-28 最終更新日 2023-09-06 実験手法 X-RAY DIFFRACTION (2.01 Å) 主引用文献 Role of conserved tyrosine residues in NiSOD catalysis: a case of convergent evolution Biochemistry, 48, 2009
3FTP	Crystal structure of 3-Ketoacyl-(acyl-carrier-protein) reductase from Burkholderia pseudomallei at 2.05 A resolution 分子名称: 3-oxoacyl-[acyl-carrier protein] reductase 著者 Seattle Structural Genomics Center for Infectious Disease (SSGCID) 登録日 2009-01-13 公開日 2009-01-27 最終更新日 2023-09-06 実験手法 X-RAY DIFFRACTION (2.05 Å) 主引用文献 Combining functional and structural genomics to sample the essential Burkholderia structome. Plos One, 8, 2013
3FWR	Crystal Structure of the CBS domains from the Bacillus subtilis CcpN repressor complexed with ADP 分子名称: ADENOSINE-5'-DIPHOSPHATE, YqzB protein 著者 Chaix, D, Arold, S, Hoh, F, Declerck, N. 登録日 2009-01-19 公開日 2010-01-26 最終更新日 2023-11-01 実験手法 X-RAY DIFFRACTION (2.45 Å) 主引用文献 Ligand recognition by the energy sensor domain of the CcpN repressor To be Published
3FWS	Crystal Structure of the CBS domains from the Bacillus subtilis CcpN repressor complexed with AppNp, phosphate and magnesium ions 分子名称: MAGNESIUM ION, PHOSPHATE ION, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER, ... 著者 Chaix, D, Arold, S, Hoh, F, Declerck, N. 登録日 2009-01-19 公開日 2010-01-26 最終更新日 2023-11-01 実験手法 X-RAY DIFFRACTION (2.03 Å) 主引用文献 Ligand recognition by the energy sensor domain of the CcpN repressor To be Published
3E1Y	Crystal structure of human eRF1/eRF3 complex 分子名称: ADENOSINE-5'-TRIPHOSPHATE, Eukaryotic peptide chain release factor GTP-binding subunit ERF3A, Eukaryotic peptide chain release factor subunit 1 著者 Cheng, Z, Lim, M, Kong, C, Song, H. 登録日 2008-08-05 公開日 2009-05-19 最終更新日 2023-11-01 実験手法 X-RAY DIFFRACTION (3.8 Å) 主引用文献 Structural insights into eRF3 and stop codon recognition by eRF1 Genes Dev., 23, 2009
3DK3	Crystal structure of mutant ABL kinase domain in complex with small molecule fragment 分子名称: 2-amino-5-[3-(1-ethyl-1H-pyrazol-5-yl)-1H-pyrrolo[2,3-b]pyridin-5-yl]-N,N-dimethylbenzamide, Proto-oncogene tyrosine-protein kinase ABL1, SULFATE ION 著者 Lewis, H.A. 登録日 2008-06-24 公開日 2008-07-29 最終更新日 2024-02-21 実験手法 X-RAY DIFFRACTION (2.02 Å) 主引用文献 Crystal structure of mutant ABL kinase domain in complex with small molecule fragment To be Published
3FLT	Crystal structure of PE-bound octameric SAP-like pentraxin from Limulus polyphemus 分子名称: CALCIUM ION, PHOSPHORIC ACID MONO-(2-AMINO-ETHYL) ESTER, SAP-like pentraxin 著者 Shrive, A.K, Greenhough, T.J, Armstrong, P.B. 登録日 2008-12-19 公開日 2009-01-20 最終更新日 2023-09-06 実験手法 X-RAY DIFFRACTION (2.7 Å) 主引用文献 Crystal structures of Limulus SAP-like pentraxin reveal two molecular aggregations. J.Mol.Biol., 386, 2009
3FPR	Crystal Structure of Evasin-1 分子名称: Evasin-1 著者 Dias, J.M, Shaw, J.P. 登録日 2009-01-06 公開日 2010-01-12 最終更新日 2011-07-13 実験手法 X-RAY DIFFRACTION (1.63 Å) 主引用文献 Structural basis of chemokine sequestration by a tick chemokine binding protein: the crystal structure of the complex between Evasin-1 and CCL3 Plos One, 4, 2009
7XDG	Cryo-EM structures of human mitochondrial NAD(P)+-dependent malic enzyme in a ternary complex with NAD+ and allosteric inhibitor MDSA 分子名称: 5-[(3-carboxy-4-oxidanyl-phenyl)methyl]-2-oxidanyl-benzoic acid, NAD-dependent malic enzyme, mitochondrial, ... 著者 Wang, C.H, Hsieh, J.T, Ho, M.C, Hung, H.C. 登録日 2022-03-27 公開日 2023-03-29 最終更新日 2024-06-26 実験手法 ELECTRON MICROSCOPY (2.84 Å) 主引用文献 Suppression of the human malic enzyme 2 modifies energy metabolism and inhibits cellular respiration Commun Biol, 6, 2023
3FSM	CRYSTAL STRUCTURE OF A CHEMICALLY SYNTHESIZED 203 AMINO ACID 'COVALENT DIMER' [L-Ala51,D-Ala51'] HIV-1 PROTEASE MOLECULE 分子名称: COVALENT DIMER [L-Ala51, D-Ala51'] HIV-1 PROTEASE, N-{(2S)-2-[(N-acetyl-L-threonyl-L-isoleucyl)amino]hexyl}-L-norleucyl-L-glutaminyl-N~5~-[amino(iminio)methyl]-L-ornithinamide 著者 Torbeev, V.Y, Kent, S.B.H. 登録日 2009-01-10 公開日 2010-01-05 最終更新日 2024-03-13 実験手法 X-RAY DIFFRACTION (1.6 Å) 主引用文献 Protein conformational dynamics in the mechanism of HIV-1 protease catalysis. Proc.Natl.Acad.Sci.USA, 108, 2011
7XDF	Cryo-EM structures of human mitochondrial NAD(P)+-dependent malic enzyme in a ternary complex with NAD+ and allosteric inhibitor EA 分子名称: 4-[(3-carboxy-2-oxidanyl-naphthalen-1-yl)methyl]-3-oxidanyl-naphthalene-2-carboxylic acid, NAD-dependent malic enzyme, mitochondrial, ... 著者 Wang, C.H, Hsieh, J.T, Ho, M.C, Hung, H.C. 登録日 2022-03-27 公開日 2023-03-29 最終更新日 2023-05-31 実験手法 ELECTRON MICROSCOPY (2.72 Å) 主引用文献 Suppression of the human malic enzyme 2 modifies energy metabolism and inhibits cellular respiration Commun Biol, 6, 2023
7XDE	Cryo-EM structures of human mitochondrial NAD(P)+-dependent malic enzyme in apo form 分子名称: NAD-dependent malic enzyme, mitochondrial, NICOTINAMIDE-ADENINE-DINUCLEOTIDE 著者 Wang, C.H, Hsieh, J.T, Ho, M.C, Hung, H.C. 登録日 2022-03-26 公開日 2023-03-29 最終更新日 2024-06-26 実験手法 ELECTRON MICROSCOPY (2.72 Å) 主引用文献 Suppression of the human malic enzyme 2 modifies energy metabolism and inhibits cellular respiration Commun Biol, 6, 2023
3FYD	Crystal Structure of Dim1 from the thermophilic archeon, Methanocaldococcus jannaschi 分子名称: Probable dimethyladenosine transferase, SULFATE ION 著者 Scarsdale, J.N, Musayev, F.N, Rife, J.P. 登録日 2009-01-22 公開日 2009-06-30 最終更新日 2023-09-06 実験手法 X-RAY DIFFRACTION (1.75 Å) 主引用文献 Structural and functional divergence within the Dim1/KsgA family of rRNA methyltransferases. J.Mol.Biol., 391, 2009
3FSO	Crystal structure of the Calx-beta domain of integrin beta4, calcium soak 分子名称: Integrin beta-4 著者 Alonso-Garcia, N, Ingles-Prieto, A, de Pereda, J.M. 登録日 2009-01-11 公開日 2009-06-23 最終更新日 2023-11-01 実験手法 X-RAY DIFFRACTION (1.405 Å) 主引用文献 Structure of the Calx-beta domain of the integrin beta4 subunit: insights into function and cation-independent stability Acta Crystallogr.,Sect.D, 65, 2009
3FXE	Crystal structure of interacting domains of IcmR and IcmQ (seleno-derivative) 分子名称: Protein IcmQ, Protein IcmR 著者 Raychaudhury, S, Akey, C.W, Head, J.F. 登録日 2009-01-20 公開日 2009-04-28 最終更新日 2021-10-20 実験手法 X-RAY DIFFRACTION (2.2 Å) 主引用文献 Structure and Function of Interacting IcmR-IcmQ Domains from a Type IVb Secretion System in Legionella pneumophila. Structure, 17, 2009
3FU9	Melanocarpus albomyces laccase crystal soaked (20 min) with 2,6-dimethoxyphenol 分子名称: 2,6-dimethoxybenzene-1,4-diol, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ... 著者 Kallio, J.P, Hakulinen, N, Rouvinen, J. 登録日 2009-01-14 公開日 2009-09-22 最終更新日 2020-07-29 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Structure-Function Studies of a Melanocarpus albomyces Laccase Suggest a Pathway for Oxidation of Phenolic Compounds. J.Mol.Biol., 392, 2009
6YXM	Crystal structure of ACPA 1F2 in complex with CII-C-39-CIT 分子名称: ACPA 1F2 Fab fragment - heavy chain, ACPA 1F2 Fab fragment - light chain, CII-C-39-CIT, ... 著者 Ge, C, Holmdahl, R. 登録日 2020-05-03 公開日 2021-05-12 最終更新日 2024-01-31 実験手法 X-RAY DIFFRACTION (2.85 Å) 主引用文献 Surface Ig variable domain glycosylation affects autoantigen binding and acts as threshold for human autoreactive B cell activation. Sci Adv, 8, 2022
6YXK	Crystal structure of ACPA 3F3 in complex with cit-vimentin 59-74 分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, ACPA 3F3 Fab fragment - heavy chain, ACPA 3F3 Fab fragment - light chain, ... 著者 Ge, C, Holmdahl, R. 登録日 2020-05-03 公開日 2021-05-12 最終更新日 2024-01-24 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Surface Ig variable domain glycosylation affects autoantigen binding and acts as threshold for human autoreactive B cell activation. Sci Adv, 8, 2022
6YXL	Crystal structure of ACPA F3 分子名称: ACPA F3 Fab fragment - heavy chain, ACPA F3 Fab fragment - light chain, GLYCEROL, ... 著者 Ge, C, Holmdahl, R. 登録日 2020-05-03 公開日 2021-05-12 最終更新日 2024-01-24 実験手法 X-RAY DIFFRACTION (2.1 Å) 主引用文献 Surface Ig variable domain glycosylation affects autoantigen binding and acts as threshold for human autoreactive B cell activation. Sci Adv, 8, 2022
7ODX	Cyanophage S-2L Succinoaminodeoxyadenylate synthetase (PurZ) bound to dGMP and dATP as an energy donor 分子名称: 2'-DEOXYADENOSINE 5'-TRIPHOSPHATE, 2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE, Succinoaminodeoxyadenylate synthetase (PurZ) 著者 Czernecki, D, Delarue, M. 登録日 2021-04-30 公開日 2021-09-01 最終更新日 2024-01-31 実験手法 X-RAY DIFFRACTION (1.69617081 Å) 主引用文献 Characterization of a triad of genes in cyanophage S-2L sufficient to replace adenine by 2-aminoadenine in bacterial DNA. Nat Commun, 12, 2021
5KJ2	The novel p300/CBP inhibitor A-485 uncovers a unique mechanism of action to target AR in castrate resistant prostate cancer 分子名称: Histone acetyltransferase p300, N-[(4-fluorophenyl)methyl]-2-{(1R)-5-[(methylcarbamoyl)amino]-2',4'-dioxo-2,3-dihydro-3'H-spiro[indene-1,5'-[1,3]oxazolidin]-3'-yl}-N-[(2S)-1,1,1-trifluoropropan-2-yl]acetamide, SODIUM ION 著者 Jakob, C.G, Qiu, W, Edalji, R.P, Sun, C. 登録日 2016-06-17 公開日 2017-09-27 最終更新日 2023-09-27 実験手法 X-RAY DIFFRACTION (1.95 Å) 主引用文献 Discovery of a selective catalytic p300/CBP inhibitor that targets lineage-specific tumours. Nature, 550, 2017
3DSI	Crystal Structure of Arabidopsis thaliana Allene Oxide Synthase (AOS, cytochrome P450 74A, CYP74A) Complexed with 13(S)-HOT at 1.60 A resolution 分子名称: (9Z,11E,13S,15Z)-13-hydroxyoctadeca-9,11,15-trienoic acid, Cytochrome P450 74A, chloroplast, ... 著者 Lee, D.S, Nioche, P, Raman, C.S. 登録日 2008-07-12 公開日 2008-08-19 最終更新日 2023-11-01 実験手法 X-RAY DIFFRACTION (1.6 Å) 主引用文献 Structural insights into the evolutionary paths of oxylipin biosynthetic enzymes Nature, 455, 2008
3DX5	Crystal structure of the probable 3-DHS dehydratase AsbF involved in the petrobactin synthesis from Bacillus anthracis 分子名称: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, 3,4-DIHYDROXYBENZOIC ACID, CHLORIDE ION, ... 著者 Kim, Y, Maltseva, N, Stols, L, Eschenfeldt, W, Pfleger, B.F, Sherman, D.H, Joachimiak, A, Midwest Center for Structural Genomics (MCSG) 登録日 2008-07-23 公開日 2008-09-02 最終更新日 2011-07-13 実験手法 X-RAY DIFFRACTION (2.12 Å) 主引用文献 Structural and functional analysis of AsbF: origin of the stealth 3,4-dihydroxybenzoic acid subunit for petrobactin biosynthesis. Proc.Natl.Acad.Sci.USA, 105, 2008
3G4F	Crystal Structure of (+)- -Cadinene Synthase from Gossypium arboreum in complex with 2-fluorofarnesyl diphosphate 分子名称: (+)-delta-cadinene synthase isozyme XC1, (2Z,6E)-2-fluoro-3,7,11-trimethyldodeca-2,6,10-trien-1-yl trihydrogen diphosphate, BETA-MERCAPTOETHANOL, ... 著者 Gennadios, H.A, Di Costanzo, L, Christianson, D.W. 登録日 2009-02-03 公開日 2009-06-23 最終更新日 2024-04-03 実験手法 X-RAY DIFFRACTION (2.651 Å) 主引用文献 Crystal structure of (+)-delta-cadinene synthase from Gossypium arboreum and evolutionary divergence of metal binding motifs for catalysis. Biochemistry, 48, 2009

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