PDB: 31311 件ウェブページステータス検索Chemie searchBIRD

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8HJQ	Crystal structure of glycosyltransferase SgUGT94-289-3 in apo state 分子名称: glycosyltranseferease 著者 Li, M, Zhang, S, Cui, S. 登録日 2022-11-23 公開日 2024-05-29 最終更新日 2024-08-14 実験手法 X-RAY DIFFRACTION (3.05 Å) 主引用文献 Structural insights into the catalytic selectivity of glycosyltransferase SgUGT94-289-3 towards mogrosides. Nat Commun, 15, 2024
6VVU	Anti-Tryptase fab E104.v1 bound to tryptase 分子名称: CALCIUM ION, Fab E104.v1 heavy chain, Fab E104.v1 light chain, ... 著者 Ultsch, M, Koerber, J.T. 登録日 2020-02-18 公開日 2020-12-30 最終更新日 2023-10-11 実験手法 X-RAY DIFFRACTION (3 Å) 主引用文献 Bivalent antibody pliers inhibit beta-tryptase by an allosteric mechanism dependent on the IgG hinge. Nat Commun, 11, 2020
4ZVY	Structure of human ALDH7A1 complexed with NAD+ in space group P4212 分子名称: Alpha-aminoadipic semialdehyde dehydrogenase, NICOTINAMIDE-ADENINE-DINUCLEOTIDE 著者 Tanner, J.J. 登録日 2015-05-18 公開日 2015-08-26 最終更新日 2023-09-27 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 Structural Basis of Substrate Recognition by Aldehyde Dehydrogenase 7A1. Biochemistry, 54, 2015
8F83	Crystal Structure of Dihydrofolate reductase (DHFR) from Mycobacterium ulcerans Agy99 in complex with NADP and inhibitor MAM846 分子名称: 3-{2-[3-({2,4-diamino-6-[4-(trifluoromethyl)phenyl]pyrimidin-5-yl}oxy)propoxy]phenyl}propanoic acid, Dihydrofolate reductase, IMIDAZOLE, ... 著者 Seattle Structural Genomics Center for Infectious Disease, Seattle Structural Genomics Center for Infectious Disease (SSGCID) 登録日 2022-11-21 公開日 2023-12-13 最終更新日 2024-06-19 実験手法 X-RAY DIFFRACTION (1.32 Å) 主引用文献 Crystal Structure of Dihydrofolate reductase (DHFR) from Mycobacterium ulcerans Agy99 in complex with NADP and inhibitor MAM846 To be published
8F9D	Compound 21 bound to procaspase-6 分子名称: 1,2-ETHANEDIOL, 5-fluoro-2-({[(3M)-3-(1,2,4-oxadiazol-3-yl)pyridin-2-yl]amino}methyl)phenol, DI(HYDROXYETHYL)ETHER, ... 著者 Fan, P, Zhao, Y, Renslo, A.R, Arkin, M.R. 登録日 2022-11-23 公開日 2023-12-13 最終更新日 2024-06-26 実験手法 X-RAY DIFFRACTION (2.65 Å) 主引用文献 Systematic Study of Heteroarene Stacking Using a Congeneric Set of Molecular Glues for Procaspase-6. J.Med.Chem., 66, 2023
8F96	Compound 3 bound to procaspase-6 分子名称: 5-fluoro-2-({[(3M)-3-(pyrimidin-4-yl)pyridin-2-yl]amino}methyl)phenol, Procaspase-6 著者 Fan, P, Zhao, Y, Renslo, A.R, Arkin, M.R. 登録日 2022-11-23 公開日 2023-12-13 最終更新日 2024-06-26 実験手法 X-RAY DIFFRACTION (2.95 Å) 主引用文献 Systematic Study of Heteroarene Stacking Using a Congeneric Set of Molecular Glues for Procaspase-6. J.Med.Chem., 66, 2023
6W8A	K2P2.1 (TREK-1):ML335 complex, 10 mM K+ 分子名称: CADMIUM ION, DODECANE, HEXADECANE, ... 著者 Lolicato, M, Minor, D.L. 登録日 2020-03-20 公開日 2021-01-27 最終更新日 2023-10-18 実験手法 X-RAY DIFFRACTION (3.002 Å) 主引用文献 K 2P channel C-type gating involves asymmetric selectivity filter order-disorder transitions. Sci Adv, 6, 2020
8HJH	Crystal structure of glycosyltransferase SgUGT94-289-3 in complex with SIA, state 3 分子名称: (20S)-2,5,8,11,14,17-HEXAMETHYL-3,6,9,12,15,18-HEXAOXAHENICOSANE-1,20-DIOL, (2S,3S,4S,5R,6R)-2-(hydroxymethyl)-6-[[(2S,3S,4S,5R,6S)-5-[(2S,3R,4S,5S,6S)-6-(hydroxymethyl)-3,4,5-tris(oxidanyl)oxan-2-yl]oxy-6-[(3R,6S)-6-[(3S,8S,9R,10R,11S,13R,14S,17R)-3-[(2S,3R,4S,5S,6S)-6-(hydroxymethyl)-3,4,5-tris(oxidanyl)oxan-2-yl]oxy-4,4,9,13,14-pentamethyl-11-oxidanyl-2,3,7,8,10,11,12,15,16,17-decahydro-1H-cyclopenta[a]phenanthren-17-yl]-2-methyl-2-oxidanyl-heptan-3-yl]oxy-3,4-bis(oxidanyl)oxan-2-yl]methoxy]oxane-3,4,5-triol, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, ... 著者 Li, M, Zhang, S, Cui, S. 登録日 2022-11-23 公開日 2024-05-29 最終更新日 2024-08-14 実験手法 X-RAY DIFFRACTION (1.76 Å) 主引用文献 Structural insights into the catalytic selectivity of glycosyltransferase SgUGT94-289-3 towards mogrosides. Nat Commun, 15, 2024
8F84	Crystal Structure of Dihydrofolate reductase (DHFR) from Mycobacterium ulcerans Agy99 in complex with NADP and inhibitor MAM787 分子名称: 3-[2-(3-{[2,4-diamino-6-(4-hydroxybutyl)pyrimidin-5-yl]oxy}propoxy)phenyl]propanoic acid, Dihydrofolate reductase, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE 著者 Seattle Structural Genomics Center for Infectious Disease, Seattle Structural Genomics Center for Infectious Disease (SSGCID) 登録日 2022-11-21 公開日 2023-12-13 最終更新日 2024-06-19 実験手法 X-RAY DIFFRACTION (1.1 Å) 主引用文献 Crystal Structure of Dihydrofolate reductase (DHFR) from Mycobacterium ulcerans Agy99 in complex with NADP and inhibitor MAM787 To be published
6W8F	K2P2.1 (TREK-1):ML335 complex, 0 mM K+ 分子名称: CADMIUM ION, DODECANE, HEXADECANE, ... 著者 Lolicato, M, Minor, D.L. 登録日 2020-03-20 公開日 2021-01-27 最終更新日 2023-10-18 実験手法 X-RAY DIFFRACTION (3.4 Å) 主引用文献 K 2P channel C-type gating involves asymmetric selectivity filter order-disorder transitions. Sci Adv, 6, 2020
4ZX9	X-ray crystal structure of PfA-M17 in complex with hydroxamic acid-based inhibitor 10b 分子名称: CARBONATE ION, DIMETHYL SULFOXIDE, GLYCEROL, ... 著者 Drinkwater, N, McGowan, S. 登録日 2015-05-20 公開日 2016-03-30 最終更新日 2023-09-27 実験手法 X-RAY DIFFRACTION (2.6 Å) 主引用文献 Potent dual inhibitors of Plasmodium falciparum M1 and M17 aminopeptidases through optimization of S1 pocket interactions. Eur.J.Med.Chem., 110, 2016
6W8S	Crystal structure of metacaspase 4 from Arabidopsis 分子名称: Metacaspase-4, SULFATE ION 著者 Zhu, P, Yu, X.H, Wang, C, Zhang, Q, Liu, W, McSweeney, S, Shanklin, J, Lam, E, Liu, Q. 登録日 2020-03-21 公開日 2020-05-20 最終更新日 2023-10-18 実験手法 X-RAY DIFFRACTION (3.484 Å) 主引用文献 Structural basis for Ca2+-dependent activation of a plant metacaspase. Nat Commun, 11, 2020
8F80	Crystal Structure of Dihydrofolate reductase (DHFR) from Mycobacterium ulcerans Agy99 in complex with NADP and inhibitor MAM738 分子名称: 1,2-ETHANEDIOL, 3-[2-(3-{[2,4-diamino-6-(4-methoxyphenyl)pyrimidin-5-yl]oxy}propoxy)phenyl]propanoic acid, Dihydrofolate reductase, ... 著者 Seattle Structural Genomics Center for Infectious Disease, Seattle Structural Genomics Center for Infectious Disease (SSGCID) 登録日 2022-11-21 公開日 2023-12-13 最終更新日 2024-06-19 実験手法 X-RAY DIFFRACTION (1.1 Å) 主引用文献 Crystal Structure of Dihydrofolate reductase (DHFR) from Mycobacterium ulcerans Agy99 in complex with NADP and inhibitor MAM738 To be published
8FBV	Compound 7 bound to procaspase-6 分子名称: 5-fluoro-2-({[(3M)-3-(1H-imidazol-2-yl)pyridin-2-yl]amino}methyl)phenol, Procaspase-6 著者 Fan, P, Zhao, Y, Renslo, A.R, Arkin, M.R. 登録日 2022-11-30 公開日 2023-12-13 最終更新日 2024-06-26 実験手法 X-RAY DIFFRACTION (2.86 Å) 主引用文献 Systematic Study of Heteroarene Stacking Using a Congeneric Set of Molecular Glues for Procaspase-6. J.Med.Chem., 66, 2023
8HJK	Crystal structure of glycosyltransferase SgUGT94-289-3 in complex with SIA, state 1 分子名称: (2S,3S,4S,5R,6R)-2-(hydroxymethyl)-6-[[(2S,3S,4S,5R,6S)-5-[(2S,3R,4S,5S,6S)-6-(hydroxymethyl)-3,4,5-tris(oxidanyl)oxan-2-yl]oxy-6-[(3R,6S)-6-[(3S,8S,9R,10R,11S,13R,14S,17R)-3-[(2S,3R,4S,5S,6S)-6-(hydroxymethyl)-3,4,5-tris(oxidanyl)oxan-2-yl]oxy-4,4,9,13,14-pentamethyl-11-oxidanyl-2,3,7,8,10,11,12,15,16,17-decahydro-1H-cyclopenta[a]phenanthren-17-yl]-2-methyl-2-oxidanyl-heptan-3-yl]oxy-3,4-bis(oxidanyl)oxan-2-yl]methoxy]oxane-3,4,5-triol, URIDINE-5'-DIPHOSPHATE, glycosyltranseferease 著者 Li, M, Zhang, S, Cui, S. 登録日 2022-11-23 公開日 2024-05-29 最終更新日 2024-08-14 実験手法 X-RAY DIFFRACTION (1.833 Å) 主引用文献 Structural insights into the catalytic selectivity of glycosyltransferase SgUGT94-289-3 towards mogrosides. Nat Commun, 15, 2024
6W9O	Crystal structure of an OTU deubiquitinase from Wolbachia pipientis wMel 分子名称: ACETATE ION, OTU domain-containing protein wMelOTU 著者 Schubert, A.F, Pruneda, J.N, Komander, D. 登録日 2020-03-23 公開日 2020-07-01 最終更新日 2023-10-18 実験手法 X-RAY DIFFRACTION (1.47 Å) 主引用文献 Identification and characterization of diverse OTU deubiquitinases in bacteria. Embo J., 39, 2020
5LFX	Lambda-[Ru(phen)2(dppz-11,12-Me)]2+ bound to a short substituted DNA sequence 分子名称: BARIUM ION, DNA (5'-D(*(CBR)P*GP*GP*C)-3'), DNA (5'-D(*GP*CP*CP*G)-3'), ... 著者 Hall, J.P, Cardin, C.J. 登録日 2016-07-04 公開日 2017-02-15 最終更新日 2024-05-08 実験手法 X-RAY DIFFRACTION (1.56 Å) 主引用文献 Guanine Can Direct Binding Specificity of Ru-dipyridophenazine (dppz) Complexes to DNA through Steric Effects. Chemistry, 23, 2017
6W9R	Crystal structure of an OTU deubiquitinase from Wolbachia pipientis wMel bound to ubiquitin 分子名称: CITRATE ANION, OTU domain-containing protein wMelOTU, Ubiquitin 著者 Schubert, A.F, Pruneda, J.N, Komander, D. 登録日 2020-03-23 公開日 2020-07-01 最終更新日 2023-10-18 実験手法 X-RAY DIFFRACTION (1.82 Å) 主引用文献 Identification and characterization of diverse OTU deubiquitinases in bacteria. Embo J., 39, 2020
8HLS	Crystal structure of the sialidase Am1547 from A.muciniphila 分子名称: CHLORIDE ION, MAGNESIUM ION, Sialidase domain-containing protein 著者 Rui, B, Xinyue, T. 登録日 2022-11-30 公開日 2024-06-05 最終更新日 2024-10-09 実験手法 X-RAY DIFFRACTION (2.04 Å) 主引用文献 Structural analysis of a novel sialidase from Akkermansia muciniphila reveals a distinct catalytic motif in GH33 family To Be Published
6WYC	Crystal Structure of Chlamydia trachomatis Glyceraldehyde 3-phosphate dehydrogenase 分子名称: Glyceraldehyde-3-phosphate dehydrogenase, NICOTINAMIDE-ADENINE-DINUCLEOTIDE 著者 Schormann, N, Chattopadhyay, D. 登録日 2020-05-12 公開日 2020-11-04 最終更新日 2023-10-18 実験手法 X-RAY DIFFRACTION (1.5 Å) 主引用文献 Chlamydia trachomatis glyceraldehyde 3-phosphate dehydrogenase: Enzyme kinetics, high-resolution crystal structure, and plasminogen binding. Protein Sci., 29, 2020
5A1S	Crystal structure of the sodium-dependent citrate symporter SeCitS form Salmonella enterica. 分子名称: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, CHLORIDE ION, CITRATE ANION, ... 著者 Woehlert, D, Groetzinger, M.J, Kuhlbrandt, W, Yildiz, O. 登録日 2015-05-05 公開日 2016-02-17 最終更新日 2024-05-08 実験手法 X-RAY DIFFRACTION (2.5 Å) 主引用文献 Mechanism of Na(+)-dependent citrate transport from the structure of an asymmetrical CitS dimer. Elife, 4, 2015
6WYQ	Crystal structure of Danio rerio histone deacetylase 6 catalytic domain 1 (CD1) K330L mutant complexed with 4-iodo-SAHA 分子名称: Histone deacetylase 6, N~1~-hydroxy-N~8~-(4-iodophenyl)octanediamide, POTASSIUM ION, ... 著者 Osko, J.D, Christianson, D.W. 登録日 2020-05-13 公開日 2020-09-02 最終更新日 2023-10-18 実験手法 X-RAY DIFFRACTION (1.90001464 Å) 主引用文献 Binding of inhibitors to active-site mutants of CD1, the enigmatic catalytic domain of histone deacetylase 6. Acta Crystallogr.,Sect.F, 76, 2020
5A2F	Two membrane distal IgSF domains of CD166 分子名称: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, CD166 ANTIGEN 著者 Chappell, P.E, Johnson, S, Lea, S.M, Brown, M.H. 登録日 2015-05-18 公開日 2015-07-22 最終更新日 2024-10-16 実験手法 X-RAY DIFFRACTION (1.86 Å) 主引用文献 Structures of Cd6 and its Ligand Cd166 Give Insight Into Their Interaction. Structure, 23, 2015
6WZ0	Fe-bound structure of an engineered metal-dependent protein trimer, TriCyt2 分子名称: FE (II) ION, HEME C, SULFATE ION, ... 著者 Tezcan, F.A, Kakkis, A. 登録日 2020-05-13 公開日 2020-09-16 最終更新日 2024-10-16 実験手法 X-RAY DIFFRACTION (1.7 Å) 主引用文献 Metal-Templated Design of Chemically Switchable Protein Assemblies with High-Affinity Coordination Sites. Angew.Chem.Int.Ed.Engl., 59, 2020
5LFR	Crystal structure of glycosylated Myelin-associated glycoprotein (MAG) Ig1-3 分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, GLYCEROL, Myelin-associated glycoprotein, ... 著者 Pronker, M.F, Janssen, B.J.C. 登録日 2016-07-04 公開日 2016-12-14 最終更新日 2024-10-23 実験手法 X-RAY DIFFRACTION (2.12 Å) 主引用文献 Structural basis of myelin-associated glycoprotein adhesion and signalling. Nat Commun, 7, 2016

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