Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

1GKM
DownloadVisualize
BU of 1gkm by Molmil
HISTIDINE AMMONIA-LYASE (HAL) FROM PSEUDOMONAS PUTIDA INHIBITED WITH L-CYSTEINE
分子名称: CYSTEINE, GLYCEROL, Histidine ammonia-lyase, ...
著者Baedeker, M, Schulz, G.E.
登録日2001-08-16
公開日2002-04-05
最終更新日2024-06-26
実験手法X-RAY DIFFRACTION (1 Å)
主引用文献Structures of Two Histidine Ammonia-Lyase Modifications and Implications for the Catalytic Mechanism
Eur.J.Biochem., 269, 2002
5M2K
DownloadVisualize
BU of 5m2k by Molmil
Crystal structure of vancomycin-Zn(II) complex
分子名称: 1,2-ETHANEDIOL, ZINC ION, vancomycin, ...
著者Zarkan, A, Macklyne, H.-R, Chirgadze, D.Y, Bond, A.D, Hesketh, A.R, Hong, H.-J.
登録日2016-10-13
公開日2017-07-19
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (1 Å)
主引用文献Zn(II) mediates vancomycin polymerization and potentiates its antibiotic activity against resistant bacteria.
Sci Rep, 7, 2017
2X46
DownloadVisualize
BU of 2x46 by Molmil
Crystal Structure of SeMet Arg r 1
分子名称: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, ALLERGEN ARG R 1
著者Paesen, G.C, Siebold, C, Syme, N, Harlos, K, Graham, S.C, Hilger, C, Homans, S.W, Hentges, F, Stuart, D.I.
登録日2010-01-28
公開日2011-02-09
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (1 Å)
主引用文献Crystal Structure of the Allergen Arg R 1, a Histamine-Binding Lipocalin from a Soft Tick
To be Published
5IQN
DownloadVisualize
BU of 5iqn by Molmil
Crystal structure of the E. coli type 1 pilus subunit FimG (engineered variant with substitution Q134E; N-terminal FimG residues 1-12 truncated) in complex with the donor strand peptide DsF_SRIRIRGYVR
分子名称: 1,2-ETHANEDIOL, COBALT (II) ION, Protein FimF, ...
著者Giese, C, Eras, J, Kern, A, Scharer, M.A, Capitani, G, Glockshuber, R.
登録日2016-03-11
公開日2016-07-06
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1 Å)
主引用文献Accelerating the Association of the Most Stable Protein-Ligand Complex by More than Two Orders of Magnitude.
Angew.Chem.Int.Ed.Engl., 55, 2016
4MTY
DownloadVisualize
BU of 4mty by Molmil
Structure at 1A resolution of a helical aromatic foldamer-protein complex.
分子名称: 4-(HYDROXYMERCURY)BENZOIC ACID, Carbonic anhydrase 2, GLYCEROL, ...
著者Ogayone, T, Buratto, J, Langlois D'Estaintot, B, Stupfel, M, Granier, T, Gallois, B, Huc, Y.
登録日2013-09-20
公開日2013-12-11
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1 Å)
主引用文献Structure of a complex formed by a protein and a helical aromatic oligoamide foldamer at 2.1 a resolution.
Angew.Chem.Int.Ed.Engl., 53, 2014
2IIM
DownloadVisualize
BU of 2iim by Molmil
SH3 Domain of Human Lck
分子名称: CALCIUM ION, Proto-oncogene tyrosine-protein kinase LCK, TETRAETHYLENE GLYCOL, ...
著者Romir, J, Egerer-Sieber, C, Muller, Y.A.
登録日2006-09-28
公開日2006-11-07
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1 Å)
主引用文献Crystal structure analysis and solution studies of human Lck-SH3; zinc-induced homodimerization competes with the binding of proline-rich motifs.
J.Mol.Biol., 365, 2007
8G22
DownloadVisualize
BU of 8g22 by Molmil
Crystal Structure of the dTDP-4-dehydrorhamnose Reductase from Streptococcus pneumoniae.
分子名称: dTDP-4-dehydrorhamnose reductase
著者Minasov, G, Shuvalova, L, Brunzelle, J.S, Kiryukhina, O, Satchell, K.J.F, Center for Structural Biology of Infectious Diseases (CSBID), Center for Structural Genomics of Infectious Diseases (CSGID)
登録日2023-02-03
公開日2023-02-22
最終更新日2024-05-22
実験手法X-RAY DIFFRACTION (1 Å)
主引用文献Crystal Structure of the dTDP-4-dehydrorhamnose Reductase from Streptococcus pneumoniae.
To Be Published
7TMJ
DownloadVisualize
BU of 7tmj by Molmil
Porous framework formed by assembly of a bipyridyl-conjugated helical peptide
分子名称: 5'-(hydrazinecarbonyl)[2,2'-bipyridine]-5-carboxamide, NITRATE ION, SILVER ION, ...
著者Nguyen, A.I.
登録日2022-01-19
公開日2022-04-20
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1 Å)
主引用文献Assembly of pi-Stacking Helical Peptides into a Porous and Multivariable Proteomimetic Framework.
J.Am.Chem.Soc., 144, 2022
7QUA
DownloadVisualize
BU of 7qua by Molmil
Duplex RNA containing Xanthosine-Cytosine base pairs
分子名称: MAGNESIUM ION, RNA (5'-R(*CP*GP*CP*GP*(XAN)P*AP*UP*UP*AP*GP*CP*G)-3'), SODIUM ION
著者Ennifar, E, Micura, R.
登録日2022-01-17
公開日2023-01-25
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (1 Å)
主引用文献Towards a comprehensive understanding of RNA deamination: synthesis and properties of xanthosine-modified RNA.
Nucleic Acids Res., 50, 2022
1MSO
DownloadVisualize
BU of 1mso by Molmil
T6 Human Insulin at 1.0 A Resolution
分子名称: Insulin A-Chain, Insulin B-Chain, ZINC ION
著者Smith, G.D, Pangborn, W.A, Blessing, R.H.
登録日2002-09-19
公開日2003-03-04
最終更新日2017-10-11
実験手法X-RAY DIFFRACTION (1 Å)
主引用文献The structure of T6 human insulin at 1.0 A resolution.
Acta Crystallogr.,Sect.D, 59, 2003
5SV5
DownloadVisualize
BU of 5sv5 by Molmil
1.0 Angstrom Crystal Structure of pre-Peptidase C-terminal Domain of Collagenase from Bacillus anthracis.
分子名称: Microbial collagenase, SODIUM ION
著者Minasov, G, Shuvalova, L, Kiryukhina, O, Dubrovska, I, Shatsman, S, Kwon, K, Anderson, W.F, Center for Structural Genomics of Infectious Diseases (CSGID)
登録日2016-08-04
公開日2016-08-17
実験手法X-RAY DIFFRACTION (1 Å)
主引用文献1.0 Angstrom Crystal Structure of pre-Peptidase C-terminal Domain of Collagenase from Bacillus anthracis.
To Be Published
2JHF
DownloadVisualize
BU of 2jhf by Molmil
Structural evidence for a ligand coordination switch in liver alcohol dehydrogenase
分子名称: ALCOHOL DEHYDROGENASE E CHAIN, CADMIUM ION, DIMETHYL SULFOXIDE, ...
著者Meijers, R, Adolph, H.W, Dauter, Z, Wilson, K.S, Lamzin, V.S, Cedergren-Zeppezauer, E.S.
登録日2007-02-22
公開日2007-04-24
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (1 Å)
主引用文献Structural Evidence for a Ligand Coordination Switch in Liver Alcohol Dehydrogenase
Biochemistry, 46, 2007
1N4V
DownloadVisualize
BU of 1n4v by Molmil
ATOMIC RESOLUTION STRUCTURE OF CHOLESTEROL OXIDASE @pH 5.8 (STREPTOMYCES SP. SA-COO)
分子名称: Cholesterol oxidase, FLAVIN-ADENINE DINUCLEOTIDE, GLYCEROL
著者Vrielink, A, Lario, P.I.
登録日2002-11-01
公開日2004-04-27
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (1 Å)
主引用文献Atomic resolution crystallography reveals how changes in pH shape the protein microenvironment
Nat.Chem.Biol., 2, 2006
1C0R
DownloadVisualize
BU of 1c0r by Molmil
COMPLEX OF VANCOMYCIN WITH D-LACTIC ACID
分子名称: CHLORIDE ION, LACTIC ACID, VANCOMYCIN, ...
著者Loll, P.J, Kaplan, J, Selinsky, B, Axelsen, P.H.
登録日1999-07-20
公開日1999-07-30
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1 Å)
主引用文献Vancomycin Binding to Low-Affinity Ligands: Delineating a Minimum Set of Interactions Necessary for High-Affinity Binding.
J.Med.Chem., 42, 1999
1UZV
DownloadVisualize
BU of 1uzv by Molmil
High affinity fucose binding of Pseudomonas aeruginosa lectin II: 1.0 A crystal structure of the complex
分子名称: CALCIUM ION, PSEUDOMONAS AERUGINOSA LECTIN II, SULFATE ION, ...
著者Mitchell, E, Sabin, C.D, Snajdrova, L, Budova, M, Perret, S, Gautier, C, Gilboa-Garber, N, Koca, J, Wimmerova, M, Imberty, A.
登録日2004-03-17
公開日2004-12-08
最終更新日2024-05-01
実験手法X-RAY DIFFRACTION (1 Å)
主引用文献High Affinity Fucose Binding of Pseudomonas Aeruginosa Lectin Pa-Iil: 1.0 A Resolution Crystal Structure of the Complex Combined with Thermodynamics and Computational Chemistry Approaches.
Proteins, 58, 2005
1YRI
DownloadVisualize
BU of 1yri by Molmil
Chicken villin subdomain HP-35, N68H, pH6.4
分子名称: ACETATE ION, IODIDE ION, Villin
著者Chiu, T.K, Kubelka, J, Herbst-Irmer, R, Eaton, W.A, Hofrichter, J, Davies, D.R.
登録日2005-02-03
公開日2005-05-03
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (1 Å)
主引用文献High-resolution x-ray crystal structures of the villin headpiece subdomain, an ultrafast folding protein.
Proc.Natl.Acad.Sci.Usa, 102, 2005
6I7Y
DownloadVisualize
BU of 6i7y by Molmil
Crystal Structure of the first bromodomain of BRD4 in complex with RT56
分子名称: 1,2-ETHANEDIOL, Bromodomain-containing protein 4, [1-[4-[2-[(4~{S})-6-(4-chlorophenyl)-8-methoxy-1-methyl-4~{H}-[1,2,4]triazolo[4,3-a][1,4]benzodiazepin-4-yl]ethanoylamino]phenyl]piperidin-4-yl]-trimethyl-azanium
著者Picaud, S, Traquete, R, Bernardes, G.J.L, Newman, J, Arrowsmith, C.H, Edwards, A.M, Bountra, C, Filippakopoulos, P, Structural Genomics Consortium (SGC)
登録日2018-11-19
公開日2019-11-27
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1 Å)
主引用文献Crystal Structure of the first bromodomain of BRD4 in complex with RT56
To Be Published
4YNH
DownloadVisualize
BU of 4ynh by Molmil
Structure of the C. elegans SAS-5 Implico dimerization domain
分子名称: Spindle assembly abnormal protein 5
著者Rogala, K.B, Vakonakis, I, Hatzopoulos, G.N.
登録日2015-03-10
公開日2015-06-10
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (1 Å)
主引用文献The Caenorhabditis elegans protein SAS-5 forms large oligomeric assemblies critical for centriole formation.
Elife, 4, 2015
3P8J
DownloadVisualize
BU of 3p8j by Molmil
Y351S mutant of pentaerythritol tetranitrate reductase containing a bound acetate molecule
分子名称: ACETATE ION, FLAVIN MONONUCLEOTIDE, Pentaerythritol tetranitrate reductase
著者Toogood, H.S, Scrutton, N.S.
登録日2010-10-14
公開日2011-04-06
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (1 Å)
主引用文献Active site modifications in pentaerythritol tetranitrate reductase can lead to improved product enantiopurity, decreased by-product formation and altered stereochemical outcome in reactions with a,b-unsaturated nitroolefins
Catalysis Science and Technology, 2011
5MAJ
DownloadVisualize
BU of 5maj by Molmil
CATHEPSIN L IN COMPLEX WITH 4-[cyclopentyl(imidazo[1,2-a]pyridin-2-ylmethyl)amino]-6-morpholino-1,3,5-triazine-2-carbonitrile
分子名称: 1,2-ETHANEDIOL, Cathepsin L1, ~{N}-cyclopentyl-~{N}-(imidazo[1,2-a]pyridin-2-ylmethyl)-4-(iminomethyl)-6-morpholin-4-yl-1,3,5-triazin-2-amine
著者Kuglstatter, A, Stihle, M, Benz, J.
登録日2016-11-03
公開日2017-01-11
最終更新日2017-02-22
実験手法X-RAY DIFFRACTION (1 Å)
主引用文献Inhibition of the Cysteine Protease Human Cathepsin L by Triazine Nitriles: AmideHeteroarene pi-Stacking Interactions and Chalcogen Bonding in the S3 Pocket.
ChemMedChem, 12, 2017
2CNQ
DownloadVisualize
BU of 2cnq by Molmil
Atomic resolution structure of SAICAR-synthase from Saccharomyces cerevisiae complexed with ADP, AICAR, succinate
分子名称: ADENOSINE MONOPHOSPHATE, ADENOSINE-5'-DIPHOSPHATE, AMINOIMIDAZOLE 4-CARBOXAMIDE RIBONUCLEOTIDE, ...
著者Urusova, D.V, Antonyuk, S.V, Grebenko, A.I, Levdikov, V.M, Barynin, V.V, Popov, A.N, Lamzin, V.S, Melik-Adamyan, W.R.
登録日2006-05-23
公開日2006-06-08
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (1 Å)
主引用文献Saicar Synthase: Substrate Recognition, Conformational Flexibility and Catalysis.
To be Published
1YWC
DownloadVisualize
BU of 1ywc by Molmil
Structure of the ferrous CO complex of NP4 from Rhodnius Prolixus at pH 7.0
分子名称: CARBON MONOXIDE, PROTOPORPHYRIN IX CONTAINING FE, nitrophorin 4
著者Maes, E.M, Weichsel, A, Roberts, S.A, Montfort, W.R.
登録日2005-02-17
公開日2005-10-04
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (1 Å)
主引用文献Ultrahigh Resolution Structures of Nitrophorin 4: Heme Distortion in Ferrous CO and NO Complexes
Biochemistry, 44, 2005
5D66
DownloadVisualize
BU of 5d66 by Molmil
Crystal structure of an ankyrin repeat domain (ABAYE2397) from Acinetobacter baumannii AYE at 1.00 A resolution
分子名称: CHLORIDE ION, Uncharacterized protein
著者Joint Center for Structural Genomics (JCSG)
登録日2015-08-11
公開日2015-09-02
最終更新日2023-02-01
実験手法X-RAY DIFFRACTION (1 Å)
主引用文献Crystal structure of an ankyrin repeat domain (ABAYE2397) from Acinetobacter baumannii AYE at 1.00 A resolution
To be published
2VHA
DownloadVisualize
BU of 2vha by Molmil
DEBP
分子名称: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, GLUTAMIC ACID, PERIPLASMIC BINDING TRANSPORT PROTEIN
著者Hu, Y.L, Fan, C.-P, Fu, G.S, Zhu, D.Y, Jin, Q, Wang, D.-C.
登録日2007-11-20
公開日2008-07-08
最終更新日2019-05-22
実験手法X-RAY DIFFRACTION (1 Å)
主引用文献Crystal Structure of a Glutamate/Aspartate Binding Protein Complexed with a Glutamate Molecule: Structural Basis of Ligand Specificity at Atomic Resolution.
J.Mol.Biol., 382, 2008
3JYO
DownloadVisualize
BU of 3jyo by Molmil
Quinate dehydrogenase from Corynebacterium glutamicum in complex with NAD
分子名称: NICOTINAMIDE-ADENINE-DINUCLEOTIDE, Quinate/shikimate dehydrogenase
著者Hoeppner, A, Niefind, K, Schomburg, D.
登録日2009-09-22
公開日2010-10-27
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (1 Å)
主引用文献Enzyme-substrate complexes of the quinate/shikimate dehydrogenase from Corynebacterium glutamicum enable new insights in substrate and cofactor binding, specificity, and discrimination.
Biol.Chem., 394, 2013

223790

件を2024-08-14に公開中

PDB statisticsPDBj update infoContact PDBjnumon