PDB: 2262 件ウェブページステータス検索Chemie searchBIRD

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8PN1	CryoEM structure of Nal1 protein, allele SPIKE, from Oryza sativa japonica group 分子名称: ADENOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, Protein NARROW LEAF 1 著者 Huang, L.Y, Rety, S, Xi, X.G. 登録日 2023-06-29 公開日 2024-04-17 最終更新日 2024-06-05 実験手法 ELECTRON MICROSCOPY (2.4 Å) 主引用文献 The catalytic triad of rice NARROW LEAF1 involves H234. Nat.Plants, 10, 2024
9F8G	Photostatin (photoswitchable azo-combretastatin) Z-PST27 bound to tubulin-DARPin D1 complex 分子名称: 5-[(~{Z})-(3,5-diethyl-4-methoxy-phenyl)diazenyl]-2-methyl-phenol, CALCIUM ION, Designed Ankyrin Repeat Protein (DARPIN) D1, ... 著者 Wranik, M, Steinmetz, M.O. 登録日 2024-05-06 公開日 2024-09-04 実験手法 X-RAY DIFFRACTION (2.2 Å) 主引用文献 A photo-SAR study of photoswitchable azobenzene tubulin-inhibiting antimitotics identifying a general method for near-quantitative photocontrol. Chem Sci, 15, 2024
3RHB	Crystal structure of the apo form of glutaredoxin C5 from Arabidopsis thaliana 分子名称: GLUTATHIONE, Glutaredoxin-C5, chloroplastic, ... 著者 Roret, T, Couturier, J, Tsan, P, Jacquot, J.P, Rouhier, N, Didierjean, C. 登録日 2011-04-11 公開日 2011-06-01 最終更新日 2023-09-13 実験手法 X-RAY DIFFRACTION (1.2 Å) 主引用文献 Arabidopsis chloroplastic glutaredoxin c5 as a model to explore molecular determinants for iron-sulfur cluster binding into glutaredoxins. J.Biol.Chem., 286, 2011
3RHC	Crystal structure of the holo form of glutaredoxin C5 from Arabidopsis thaliana 分子名称: FE2/S2 (INORGANIC) CLUSTER, GLUTATHIONE, Glutaredoxin-C5, ... 著者 Roret, T, Couturier, J, Tsan, P, Jacquot, J.P, Rouhier, N, Didierjean, C. 登録日 2011-04-11 公開日 2011-06-01 最終更新日 2024-02-21 実験手法 X-RAY DIFFRACTION (2.4 Å) 主引用文献 Arabidopsis chloroplastic glutaredoxin c5 as a model to explore molecular determinants for iron-sulfur cluster binding into glutaredoxins. J.Biol.Chem., 286, 2011
7BWN	Crystal Structure of a Designed Protein Heterocatenane 分子名称: Cellular tumor antigen p53, Chimera of Green fluorescent protein and p53dim 著者 Liu, Y.J, Duan, Z.L, Fang, J, Zhang, F, Xiao, J.Y, Zhang, W.B. 登録日 2020-04-15 公開日 2020-06-17 最終更新日 2023-11-29 実験手法 X-RAY DIFFRACTION (2.396 Å) 主引用文献 Cellular Synthesis and X-ray Crystal Structure of a Designed Protein Heterocatenane. Angew.Chem.Int.Ed.Engl., 59, 2020
6NHT	Single particle reconstruction of the symmetric core an engineered protein scaffold 分子名称: DARP14 - Subunit A with DARPin, DARP14 - Subunit B 著者 Liu, Y, Huynh, D, Yeates, T.O. 登録日 2018-12-23 公開日 2019-05-08 最終更新日 2024-03-20 実験手法 ELECTRON MICROSCOPY (2.9 Å) 主引用文献 A 3.8 angstrom resolution cryo-EM structure of a small protein bound to an imaging scaffold. Nat Commun, 10, 2019
7DIG	Green fluorescent protein from Dendronephthya sp. SSAL-2002 分子名称: Green fluorescent protein 著者 Nam, K.H. 登録日 2020-11-19 公開日 2021-12-08 最終更新日 2024-10-23 実験手法 X-RAY DIFFRACTION (2.6 Å) 主引用文献 Metal-Induced Fluorescence Quenching of Photoconvertible Fluorescent Protein DendFP. Molecules, 27, 2022
7DNB	Crystal structure of PhoCl barrel 分子名称: PhoCl Barrel, SODIUM ION 著者 Wen, Y, Lemieux, J.M. 登録日 2020-12-09 公開日 2021-01-27 最終更新日 2023-11-29 実験手法 X-RAY DIFFRACTION (2.81 Å) 主引用文献 Photocleavable proteins that undergo fast and efficient dissociation. Chem Sci, 12, 2021
7CZ0	Crystal structure of a thermostable green fluorescent protein (TGP) with a synthetic nanobody (Sb92) 分子名称: ACETATE ION, CACODYLATE ION, CACODYLIC ACID, ... 著者 Cai, H, Yao, H, Li, T, Hutter, C, Tang, Y, Li, Y, Seeger, M, Li, D. 登録日 2020-09-06 公開日 2021-09-08 最終更新日 2024-10-16 実験手法 X-RAY DIFFRACTION (2.77 Å) 主引用文献 An improved fluorescent protein tag and its nanobodies for membrane protein expression, stability assay, and purification To Be Published
4EEU	Crystal structure of phiLOV2.1 分子名称: FLAVIN MONONUCLEOTIDE, Phototropin-2 著者 Hitomi, K, Christie, J.M, Arvai, A.S, Hartfield, K.A, Pratt, A.J, Tainer, J.A, Getzoff, E.D. 登録日 2012-03-28 公開日 2012-05-16 最終更新日 2023-09-13 実験手法 X-RAY DIFFRACTION (1.4068 Å) 主引用文献 Structural Tuning of the Fluorescent Protein iLOV for Improved Photostability. J.Biol.Chem., 287, 2012
4EER	Crystal structure of LOV2 domain of Arabidopsis thaliana phototropin 2 C426A mutant 分子名称: FLAVIN MONONUCLEOTIDE, Phototropin-2 著者 Hitomi, K, Christie, J.M, Arvai, A.S, Hartfield, K.A, Pratt, A.J, Tainer, J.A, Getzoff, E.D. 登録日 2012-03-28 公開日 2012-05-16 最終更新日 2023-09-13 実験手法 X-RAY DIFFRACTION (1.753 Å) 主引用文献 Structural Tuning of the Fluorescent Protein iLOV for Improved Photostability. J.Biol.Chem., 287, 2012
4EET	Crystal structure of iLOV 分子名称: FLAVIN MONONUCLEOTIDE, Phototropin-2 著者 Hitomi, K, Christie, J.M, Arvai, A.S, Hartfield, K.A, Pratt, A.J, Tainer, J.A, Getzoff, E.D. 登録日 2012-03-28 公開日 2012-05-16 最終更新日 2023-09-13 実験手法 X-RAY DIFFRACTION (1.2 Å) 主引用文献 Structural Tuning of the Fluorescent Protein iLOV for Improved Photostability. J.Biol.Chem., 287, 2012
4EEP	Crystal structure of LOV2 domain of Arabidopsis thaliana phototropin 2 分子名称: FLAVIN MONONUCLEOTIDE, Phototropin-2 著者 Hitomi, K, Christie, J.M, Arvai, A.S, Hartfield, K.A, Pratt, A.J, Tainer, J.A, Getzoff, E.D. 登録日 2012-03-28 公開日 2012-05-16 最終更新日 2023-09-13 実験手法 X-RAY DIFFRACTION (1.7 Å) 主引用文献 Structural Tuning of the Fluorescent Protein iLOV for Improved Photostability. J.Biol.Chem., 287, 2012
4DE8	LytR-Cps2a-Psr family protein with bound octaprenyl monophosphate lipid 分子名称: (2Z,6Z,10Z,14Z,18Z,22Z,26Z)-3,7,11,15,19,23,27,31-octamethyldotriaconta-2,6,10,14,18,22,26,30-octaen-1-yl dihydrogen phosphate, Cps2A, DI(HYDROXYETHYL)ETHER 著者 Eberhardt, A, Hoyland, C.N, Vollmer, D.V, Bisle, S, Cleverley, R.M, Johnsborg, O, Havarstein, L.S, Lewis, R.J, Vollmer, W. 登録日 2012-01-20 公開日 2012-04-04 最終更新日 2024-02-28 実験手法 X-RAY DIFFRACTION (1.95 Å) 主引用文献 Attachment of Capsular Polysaccharide to the Cell Wall in Streptococcus pneumoniae. Microb Drug Resist, 18, 2012
3C1Q	The three-dimensional structure of the cytoplasmic domains of EpsF from the Type 2 Secretion System of Vibrio cholerae 分子名称: 3,6,9,12,15,18,21,24-OCTAOXAHEXACOSAN-1-OL, CALCIUM ION, CHLORIDE ION, ... 著者 Abendroth, J, Mitchell, D.D, Korotkov, K.V, Kreeger, A, Hol, W.G.J. 登録日 2008-01-24 公開日 2009-02-03 最終更新日 2024-10-30 実験手法 X-RAY DIFFRACTION (1.7 Å) 主引用文献 The three-dimensional structure of the cytoplasmic domains of EpsF from the type 2 secretion system of Vibrio cholerae J.Struct.Biol., 166, 2009
2FL1	Crystal structure of red fluorescent protein from Zoanthus, zRFP574, at 2.4A resolution 分子名称: Red fluorescent protein zoanRFP, SULFATE ION 著者 Pletnev, V, Pletneva, N, Martynov, V, Tikhonova, T, Popov, B, Pletnev, S. 登録日 2006-01-05 公開日 2007-01-09 最終更新日 2024-11-20 実験手法 X-RAY DIFFRACTION (2.4 Å) 主引用文献 Structure of a red fluorescent protein from Zoanthus, zRFP574, reveals a novel chromophore Acta Crystallogr.,Sect.D, 62, 2006
4GPB	COMPARISON OF THE BINDING OF GLUCOSE AND GLUCOSE-1-PHOSPHATE DERIVATIVES TO T-STATE GLYCOGEN PHOSPHORYLASE B 分子名称: 2-deoxy-2-fluoro-1-O-phosphono-alpha-D-glucopyranose, GLYCOGEN PHOSPHORYLASE B, PYRIDOXAL-5'-PHOSPHATE 著者 Martin, J.L, Johnson, L.N. 登録日 1990-06-04 公開日 1992-10-15 最終更新日 2025-03-26 実験手法 X-RAY DIFFRACTION (2.3 Å) 主引用文献 Comparison of the binding of glucose and glucose 1-phosphate derivatives to T-state glycogen phosphorylase b. Biochemistry, 29, 1990
4DE9	LytR-CPS2A-psr family protein YwtF (TagT) with bound octaprenyl pyrophosphate lipid 分子名称: (2Z,6Z,10Z,14Z,18Z,22E,26E)-3,7,11,15,19,23,27,31-octamethyldotriaconta-2,6,10,14,18,22,26,30-octaen-1-yl trihydrogen diphosphate, Putative transcriptional regulator ywtF 著者 Eberhardt, A, Hoyland, C.N, Vollmer, D, Bisle, S, Cleverley, R.M, Johnsborg, O, Havarstein, S, Lewis, R.J, Vollmer, W. 登録日 2012-01-20 公開日 2012-04-04 最終更新日 2024-02-28 実験手法 X-RAY DIFFRACTION (1.787 Å) 主引用文献 Attachment of Capsular Polysaccharide to the Cell Wall in Streptococcus pneumoniae. Microb Drug Resist, 18, 2012
4EES	Crystal structure of iLOV 分子名称: FLAVIN MONONUCLEOTIDE, Phototropin-2 著者 Hitomi, K, Christie, J.M, Arvai, A.S, Hartfield, K.A, Pratt, A.J, Tainer, J.A, Getzoff, E.D. 登録日 2012-03-28 公開日 2012-05-16 最終更新日 2023-09-13 実験手法 X-RAY DIFFRACTION (1.805 Å) 主引用文献 Structural Tuning of the Fluorescent Protein iLOV for Improved Photostability. J.Biol.Chem., 287, 2012
2HPW	Green fluorescent protein from Clytia gregaria 分子名称: Green fluorescent protein 著者 Stepanyuk, G, Liu, Z.J, Vysotski, S.E, Lee, J, Rose, J.P, Wang, B.C, Southeast Collaboratory for Structural Genomics (SECSG) 登録日 2006-07-17 公開日 2006-09-12 最終更新日 2024-10-30 実験手法 X-RAY DIFFRACTION (1.55 Å) 主引用文献 Crystal Structure of Green Fluorescent Protein from Clytia Gregaria at 1.55 A resolution To be Published
3WUP	Crystal Structure of the Ubiquitin-Binding Zinc Finger (UBZ) Domain of the Human DNA Polymerase Eta 分子名称: CHLORIDE ION, DNA polymerase eta, GLYCEROL, ... 著者 Suzuki, N, Wakatsuki, S, Kawasaki, S. 登録日 2014-05-01 公開日 2015-06-17 最終更新日 2024-05-29 実験手法 X-RAY DIFFRACTION (1.6 Å) 主引用文献 A novel mode of ubiquitin recognition by the ubiquitin-binding zinc finger domain of WRNIP1. Febs J., 283, 2016
3ZUL	Padron on (fluorescent) Icis intermediate state 分子名称: FLUORESCENT PROTEIN DRONPA 著者 Faro, A.R, Carpentier, P, Bougeois, D. 登録日 2011-07-19 公開日 2011-11-09 最終更新日 2024-10-23 実験手法 X-RAY DIFFRACTION (2.3 Å) 主引用文献 Low-Temperature Chromophore Isomerization Reveals the Photoswitching Mechanism of the Fluorescent Protein Padron. J.Am.Chem.Soc., 133, 2011
5O1Q	LysF1 sh3b domain structure 分子名称: sh3b domain 著者 Benesik, M, Novacek, J, Janda, L, Dopitova, R, Pernisova, M, Melkova, K, Tisakova, L, Doskar, J, Zidek, L, Hejatko, J, Pantucek, R. 登録日 2017-05-19 公開日 2017-09-20 最終更新日 2024-06-19 実験手法 SOLUTION NMR 主引用文献 Role of SH3b binding domain in a natural deletion mutant of Kayvirus endolysin LysF1 with a broad range of lytic activity. Virus Genes, 54, 2018
4BD8	Bax domain swapped dimer induced by BimBH3 with CHAPS 分子名称: 1,2-ETHANEDIOL, APOPTOSIS REGULATOR BAX, PRASEODYMIUM ION 著者 Czabotar, P.E, Westphal, D, Adams, J.M, Colman, P.M. 登録日 2012-10-05 公開日 2013-02-13 最終更新日 2024-05-01 実験手法 X-RAY DIFFRACTION (2.22 Å) 主引用文献 Bax Crystal Structures Reveal How Bh3 Domains Activate Bax and Nucleate its Oligomerization to Induce Apoptosis. Cell(Cambridge,Mass.), 152, 2013
7UJ0	ClpAP complex bound to ClpS N-terminal extension, class IIIb 分子名称: ADENOSINE-5'-DIPHOSPHATE, ATP-dependent Clp protease ATP-binding subunit ClpA, ATP-dependent Clp protease adapter protein ClpS, ... 著者 Kim, S, Fei, X, Sauer, R.T, Baker, T.A. 登録日 2022-03-29 公開日 2022-11-09 最終更新日 2024-06-12 実験手法 ELECTRON MICROSCOPY (3.26 Å) 主引用文献 AAA+ protease-adaptor structures reveal altered conformations and ring specialization. Nat.Struct.Mol.Biol., 29, 2022

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