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7PRY
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Crystal structure of the receptor binding domain of SARS-CoV-2 beta variant spike glycoprotein in complex with COVOX-45 and beta-6 Fabs
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, Beta-6 Fab heavy chain, Beta-6 Fab light chain, ...
著者Zhou, D, Ren, J, Stuart, D.I.
登録日2021-09-22
公開日2021-12-15
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (3.1 Å)
主引用文献The antibody response to SARS-CoV-2 Beta underscores the antigenic distance to other variants.
Cell Host Microbe, 30, 2022
7PS4
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Crystal structure of the receptor binding domain of SARS-CoV-2 beta variant spike glycoprotein in complex with Beta-38
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Beta-38 Fab heavy chain, Beta-38 Fab light chain, ...
著者Zhou, D, Ren, J, Stuart, D.I.
登録日2021-09-22
公開日2021-12-15
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.94 Å)
主引用文献The antibody response to SARS-CoV-2 Beta underscores the antigenic distance to other variants.
Cell Host Microbe, 30, 2022
7PS7
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Crystal structure of the receptor binding domain of SARS-CoV-2 beta variant spike glycoprotein in complex with Beta-40 Fab
分子名称: Beta-40 Fab light chain, Beta-40 heavy chain, Spike protein S1
著者Zhou, D, Ren, J, Stuart, D.I.
登録日2021-09-22
公開日2021-12-15
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (3.9 Å)
主引用文献The antibody response to SARS-CoV-2 Beta underscores the antigenic distance to other variants.
Cell Host Microbe, 30, 2022
7PDU
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BU of 7pdu by Molmil
Pre-catalytic complex of 10-23 DNAzyme with RNA target
分子名称: 10-23 DNAzyme (33-MER), RNA target (19-MER)
著者Etzkorn, M, Borggrafe, J, Viegas, A.
登録日2021-08-07
公開日2021-12-15
最終更新日2024-06-19
実験手法SOLUTION NMR
主引用文献Time-resolved structural analysis of an RNA-cleaving DNA catalyst.
Nature, 601, 2022
7PCW
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X-RAY STRUCTURE OF THE HALOALKANE DEHALOGENASE HALOTAG7-M175W LABELED WITH A CHLOROALKANE-TETRAMETHYLRHODAMINE FLUOROPHORE SUBSTRATE
分子名称: CHLORIDE ION, Haloalkane dehalogenase, [9-[2-carboxy-5-[2-[2-(6-chloranylhexoxy)ethoxy]ethylcarbamoyl]phenyl]-6-(dimethylamino)xanthen-3-ylidene]-dimethyl-azanium
著者Tarnawski, M, Frei, M, Hiblot, J, Johnsson, K.
登録日2021-08-04
公開日2021-12-15
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Engineered HaloTag variants for fluorescence lifetime multiplexing.
Nat.Methods, 19, 2022
5BNI
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BU of 5bni by Molmil
Porcine CD38 complexed with complexed with a covalent intermediate, ribo-F-ribose-5'-phosphate
分子名称: Uncharacterized protein, [(2R,3S,4R,5R)-5-(6-amino-9H-purin-9-yl)-3,4-dihydroxytetrahydrofuran-2-yl]methyl [(2R,3R,4S)-4-fluoro-3-hydroxytetrahydrofuran-2-yl]methyl dihydrogen diphosphate
著者Ting, K.Y, Leung, C.F.P, Graeff, R.M, Lee, H.C, Hao, Q, Kotaka, M.
登録日2015-05-26
公開日2016-05-25
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Porcine CD38 exhibits prominent secondary NAD(+) cyclase activity.
Protein Sci., 25, 2016
3MFF
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1F1E8hu TCR
分子名称: ARGININE, GLYCEROL, T cell receptor alpha chain, ...
著者van Boxel, G.I, Holmes, S, Fugger, L, Jones, E.Y.
登録日2010-04-02
公開日2010-06-02
最終更新日2014-03-05
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献An alternative conformation of the T-cell receptor alpha constant region
J.Mol.Biol., 400, 2010
7PRZ
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Crystal structure of the receptor binding domain of SARS-CoV-2 beta variant spike glycoprotein in complex with beta-22 Fabs
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, Beta-22 Fab heavy chain, Beta-22 Fab light chain, ...
著者Zhou, D, Ren, J, Stuart, D.I.
登録日2021-09-22
公開日2021-12-15
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (3.2 Å)
主引用文献The antibody response to SARS-CoV-2 Beta underscores the antigenic distance to other variants.
Cell Host Microbe, 30, 2022
7PS2
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Crystal structure of the receptor binding domain of SARS-CoV-2 beta variant spike glycoprotein in complex with Beta-29 and Beta-53 Fabs
分子名称: Beta-29 Fab heavy chain, Beta-29 Fab light chain, Beta-53 Fab light chain, ...
著者Zhou, D, Ren, J, Stuart, D.I.
登録日2021-09-22
公開日2021-12-15
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (2.99 Å)
主引用文献The antibody response to SARS-CoV-2 Beta underscores the antigenic distance to other variants.
Cell Host Microbe, 30, 2022
3NA0
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BU of 3na0 by Molmil
Crystal structure of human CYP11A1 in complex with 20,22-dihydroxycholesterol
分子名称: (3alpha,8alpha,22R)-cholest-5-ene-3,20,22-triol, Adrenodoxin, mitochondrial, ...
著者Strushkevich, N.V, MacKenzie, F, Tempel, W, Botchkarev, A, Arrowsmith, C.H, Edwards, A.M, Bountra, C, Weigelt, J.U, Park, H, Structural Genomics Consortium (SGC)
登録日2010-05-31
公開日2010-09-08
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Structural basis for pregnenolone biosynthesis by the mitochondrial monooxygenase system.
Proc.Natl.Acad.Sci.USA, 108, 2011
7PS5
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BU of 7ps5 by Molmil
Crystal structure of the receptor binding domain of SARS-CoV-2 beta variant spike glycoprotein in complex with Beta-47 Fab
分子名称: Beta-47 Fab heavy chain, Beta-47 Fab light chain, Spike protein S1, ...
著者Zhou, D, Ren, J, Stuart, D.I.
登録日2021-09-22
公開日2021-12-15
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (3.14 Å)
主引用文献The antibody response to SARS-CoV-2 Beta underscores the antigenic distance to other variants.
Cell Host Microbe, 30, 2022
7PCX
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BU of 7pcx by Molmil
X-RAY STRUCTURE OF THE HALOALKANE DEHALOGENASE HALOTAG7-Q165W LABELED WITH A CHLOROALKANE-TETRAMETHYLRHODAMINE FLUOROPHORE SUBSTRATE
分子名称: CHLORIDE ION, GLYCEROL, Haloalkane dehalogenase, ...
著者Tarnawski, M, Frei, M, Hiblot, J, Johnsson, K.
登録日2021-08-04
公開日2021-12-15
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献Engineered HaloTag variants for fluorescence lifetime multiplexing.
Nat.Methods, 19, 2022
3MGE
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BU of 3mge by Molmil
X-ray Structure of Hexameric HIV-1 CA
分子名称: 1,2-ETHANEDIOL, Capsid protein p24
著者Pornillos, O.
登録日2010-04-05
公開日2010-07-21
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Disulfide Bond Stabilization of the Hexameric Capsomer of Human Immunodeficiency Virus.
J.Mol.Biol., 401, 2010
7PS1
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BU of 7ps1 by Molmil
Crystal structure of the receptor binding domain of SARS-CoV-2 beta variant spike glycoprotein in complex with Beta-27 Fab
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Beta-27 Fab heavy chain, Beta-27 Fab light chain, ...
著者Zhou, D, Ren, J, Stuart, D.I.
登録日2021-09-22
公開日2021-12-15
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献The antibody response to SARS-CoV-2 Beta underscores the antigenic distance to other variants.
Cell Host Microbe, 30, 2022
3MPS
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BU of 3mps by Molmil
Peroxide Bound Oxidized Rubrerythrin from Pyrococcus furiosus
分子名称: FE (III) ION, HYDROGEN PEROXIDE, MU-OXO-DIIRON, ...
著者Dillard, B.D, Adams, M.W.W, Lanzilotta, W.N.
登録日2010-04-27
公開日2011-06-22
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献A cryo-crystallographic time course for peroxide reduction by rubrerythrin from Pyrococcus furiosus.
J.Biol.Inorg.Chem., 16, 2011
5XTH
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BU of 5xth by Molmil
Cryo-EM structure of human respiratory supercomplex I1III2IV1
分子名称: (9R,11S)-9-({[(1S)-1-HYDROXYHEXADECYL]OXY}METHYL)-2,2-DIMETHYL-5,7,10-TRIOXA-2LAMBDA~5~-AZA-6LAMBDA~5~-PHOSPHAOCTACOSANE-6,6,11-TRIOL, 1,2-Dioleoyl-sn-glycero-3-phosphoethanolamine, Acyl carrier protein, ...
著者Gu, J, Wu, M, Yang, M.
登録日2017-06-19
公開日2017-09-13
最終更新日2019-11-20
実験手法ELECTRON MICROSCOPY (3.9 Å)
主引用文献Architecture of Human Mitochondrial Respiratory Megacomplex I2III2IV2.
Cell, 170, 2017
3MLT
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BU of 3mlt by Molmil
Crystal structure of anti-HIV-1 V3 Fab 2557 in complex with a UG1033 V3 peptide
分子名称: HIV-1 gp120 third variable region (V3) crown, Human monoclonal anti-HIV-1 gp120 V3 antibody 2557 Fab heavy chain, Human monoclonal anti-HIV-1 gp120 V3 antibody 2557 Fab light chain
著者Kong, X.-P.
登録日2010-04-18
公開日2010-07-14
最終更新日2017-11-08
実験手法X-RAY DIFFRACTION (2.49 Å)
主引用文献Conserved structural elements in the V3 crown of HIV-1 gp120.
Nat.Struct.Mol.Biol., 17, 2010
3NN0
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BU of 3nn0 by Molmil
Complex of 6-hydroxy-L-nicotine oxidase with nicotinamide
分子名称: (1R)-2-{[(S)-(2-aminoethoxy)(hydroxy)phosphoryl]oxy}-1-[(pentadecanoyloxy)methyl]ethyl (12E)-hexadeca-9,12-dienoate, 6-hydroxy-L-nicotine oxidase, FLAVIN-ADENINE DINUCLEOTIDE, ...
著者Kachalova, G.S, Bartunik, H.D.
登録日2010-06-23
公開日2011-06-15
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2.75 Å)
主引用文献Crystal structure analysis of free and substrate-bound 6-hydroxy-L-nicotine oxidase from Arthrobacter nicotinovorans.
J.Mol.Biol., 396, 2010
5C10
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BU of 5c10 by Molmil
Nuclease domain of the large terminase subunit gp2 of bacterial virus Sf6
分子名称: Gene 2 protein
著者Zhao, H, Tang, L.
登録日2015-06-12
公開日2015-10-21
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (1.55 Å)
主引用文献Two distinct modes of metal ion binding in the nuclease active site of a viral DNA-packaging terminase: insight into the two-metal-ion catalytic mechanism.
Nucleic Acids Res., 43, 2015
5C2D
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BU of 5c2d by Molmil
K428A mutant gp2c of large terminase subunit from bacteriophage sf6 with calcium
分子名称: CALCIUM ION, Gene 2 protein
著者Zhao, H, Tang, L.
登録日2015-06-15
公開日2015-10-21
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (1.59 Å)
主引用文献Two distinct modes of metal ion binding in the nuclease active site of a viral DNA-packaging terminase: insight into the two-metal-ion catalytic mechanism.
Nucleic Acids Res., 43, 2015
5C16
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BU of 5c16 by Molmil
Myotubularin-related proetin 1
分子名称: Myotubularin-related protein 1, PHOSPHATE ION
著者Lee, B.I, Bong, S.M.
登録日2015-06-13
公開日2016-04-27
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2.07 Å)
主引用文献Crystal Structure of Human Myotubularin-Related Protein 1 Provides Insight into the Structural Basis of Substrate Specificity
Plos One, 11, 2016
1OZ7
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BU of 1oz7 by Molmil
Crystal structure of Echicetin from the venom of Indian saw-scaled viper (Echis carinatus) at 2.4 resolution
分子名称: echicetin A-chain, echicetin B-chain
著者Jasti, J, Paramasivam, M, Srinivasan, A, Singh, T.P.
登録日2003-04-08
公開日2003-12-30
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Crystal structure of echicetin from Echis carinatus (Indian saw-scaled viper) at 2.4A resolution.
J.Mol.Biol., 335, 2004
2MXA
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BU of 2mxa by Molmil
Solution structure of the NDH-1 complex subunit CupS from Thermosynechococcus elongatus
分子名称: NDH-1 complex sensory subunit CupS
著者Korste, A, Wulfhorst, H, Ikegami, T, Nowaczyk, M.M, Stoll, R.
登録日2014-12-17
公開日2015-06-10
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Solution structure of the NDH-1 complex subunit CupS from Thermosynechococcus elongatus.
Biochim.Biophys.Acta, 1847, 2015
1P90
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The Three-dimensional Structure of the Core Domain of NafY from Azotobacter vinelandii determined at 1.8 resolution
分子名称: 1,2-ETHANEDIOL, hypothetical protein
著者Dyer, D.H, Rubio, L.M, Thoden, J.B, Holden, H.M, Ludden, P.W, Rayment, I.
登録日2003-05-08
公開日2003-08-19
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献The Three-dimensional Structure of the Core Domain of NafY from Azotobacter vinelandii determined at 1.8 A resolution
J.Biol.Chem., 278, 2003
4LTR
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Bacterial sodium channel, His245Gly mutant, I222 space group
分子名称: Ion transport protein
著者Shaya, D, Findeisen, F, Abderemane-Ali, F, Arrigoni, C, Wong, S, Reddy Nurva, S, Loussouarn, G, Minor, D.L.
登録日2013-07-23
公開日2013-10-23
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (5.8 Å)
主引用文献Structure of a prokaryotic sodium channel pore reveals essential gating elements and an outer ion binding site common to eukaryotic channels.
J.Mol.Biol., 426, 2014

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