PDB: 45953 件ウェブページステータス検索Chemie searchBIRD

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3R9Y	Crystal Structure of StWhy2 K67A (form I) 分子名称: PHOSPHATE ION, Why2 protein 著者 Cappadocia, L, Brisson, N, Sygusch, J. 登録日 2011-03-26 公開日 2011-09-28 最終更新日 2023-09-13 実験手法 X-RAY DIFFRACTION (2.35 Å) 主引用文献 A conserved lysine residue of plant Whirly proteins is necessary for higher order protein assembly and protection against DNA damage. Nucleic Acids Res., 40, 2012
3KHB	Crystal structure of Escherichia coli AlkB with Co(II) and 2-OG 分子名称: 2-OXOGLUTARIC ACID, Alpha-ketoglutarate-dependent dioxygenase alkB, COBALT (II) ION 著者 Hollis, T, Holland, P.J. 登録日 2009-10-30 公開日 2010-01-12 最終更新日 2023-09-06 実験手法 X-RAY DIFFRACTION (2.9 Å) 主引用文献 Structural and mutational analysis of Escherichia coli AlkB provides insight into substrate specificity and DNA damage searching. Plos One, 5, 2010
3PJR	HELICASE SUBSTRATE COMPLEX 分子名称: 5'-D(*CP*GP*AP*GP*CP*AP*CP*TP*GP*C)-3', 5'-D(*GP*CP*AP*GP*TP*GP*CP*TP*CP*GP*TP*TP*TP*TP*T)-3', ADENOSINE-5'-TRIPHOSPHATE, ... 著者 Velankar, S.S, Soultanas, P, Dillingham, M.S, Subramanya, H.S, Wigley, D.B. 登録日 1999-03-12 公開日 1999-04-08 最終更新日 2023-12-27 実験手法 X-RAY DIFFRACTION (3.3 Å) 主引用文献 Crystal structures of complexes of PcrA DNA helicase with a DNA substrate indicate an inchworm mechanism Cell(Cambridge,Mass.), 97, 1999
1M6G	Structural Characterisation of the Holliday Junction TCGGTACCGA 分子名称: 5'-D(*TP*CP*GP*GP*TP*AP*CP*CP*GP*A)-3', STRONTIUM ION 著者 Thorpe, J.H, Gale, B.C, Teixeira, S.C.M, Cardin, C.J. 登録日 2002-07-16 公開日 2003-05-06 最終更新日 2024-02-14 実験手法 X-RAY DIFFRACTION (1.652 Å) 主引用文献 Conformational and hydration effects of site-selective sodium, calcium and strontium ion binding to the DNA Holliday junction structure d(TCGGTACCGA)(4) J.Mol.Biol., 327, 2003
3R4F	Prohead RNA 分子名称: MAGNESIUM ION, pRNA 著者 Ding, F, Lu, C, Zhano, W, Rajashankar, K.R, Anderson, D.L, Jardine, P.J, Grimes, S, Ke, A. 登録日 2011-03-17 公開日 2011-04-20 最終更新日 2024-02-21 実験手法 X-RAY DIFFRACTION (3.5 Å) 主引用文献 Structure and assembly of the essential RNA ring component of a viral DNA packaging motor. Proc.Natl.Acad.Sci.USA, 108, 2011
3U7E	Crystal structure of mPNKP catalytic fragment (D170A) 分子名称: Bifunctional polynucleotide phosphatase/kinase, GLYCEROL, MAGNESIUM ION, ... 著者 Coquelle, N, Havali, Z, Bernstein, N, Green, R, Glover, J.N.M. 登録日 2011-10-13 公開日 2011-12-14 最終更新日 2023-12-06 実験手法 X-RAY DIFFRACTION (1.7 Å) 主引用文献 Structural basis for the phosphatase activity of polynucleotide kinase/phosphatase on single- and double-stranded DNA substrates. Proc.Natl.Acad.Sci.USA, 108, 2011
1VDD	Crystal structure of recombinational repair protein RecR 分子名称: IMIDAZOLE, Recombination protein recR, ZINC ION 著者 Lee, B.I, Kim, K.H, Suh, S.W. 登録日 2004-03-20 公開日 2004-05-18 最終更新日 2023-12-27 実験手法 X-RAY DIFFRACTION (2.5 Å) 主引用文献 Ring-shaped architecture of RecR: implications for its role in homologous recombinational DNA repair Embo J., 23, 2004
3H1T	The fragment structure of a putative HsdR subunit of a type I restriction enzyme from Vibrio vulnificus YJ016 分子名称: Type I site-specific restriction-modification system, R (Restriction) subunit 著者 Park, S.Y, Lee, H.J, Kim, J.S. 登録日 2009-04-13 公開日 2009-10-20 最終更新日 2019-11-06 実験手法 X-RAY DIFFRACTION (2.3 Å) 主引用文献 The fragment structure of a putative HsdR subunit of a type I restriction enzyme from Vibrio vulnificus YJ016: implications for DNA restriction and translocation activity Nucleic Acids Res., 2009
3S4W	Structure of the FANCI-FANCD2 complex 分子名称: Fanconi anemia group D2 protein homolog, Fanconi anemia group I protein homolog 著者 Pavletich, N.P. 登録日 2011-05-20 公開日 2011-07-27 最終更新日 2023-09-13 実験手法 X-RAY DIFFRACTION (3.408 Å) 主引用文献 Structure of the FANCI-FANCD2 complex: insights into the Fanconi anemia DNA repair pathway. Science, 333, 2011
6J80	Human mitochondrial Oligoribonuclease in complex with poly-dT DNA 分子名称: CITRIC ACID, DNA (5'-D(P*TP*TP*TP*TP*TP*TP*T)-3'), MAGNESIUM ION, ... 著者 Chu, L.Y, Agrawal, S, Yuan, H.S. 登録日 2019-01-18 公開日 2019-08-28 最終更新日 2023-11-22 実験手法 X-RAY DIFFRACTION (1.812 Å) 主引用文献 Structural insights into nanoRNA degradation by human Rexo2. Rna, 25, 2019
3S51	Structure of FANCI 分子名称: Fanconi anemia group I protein homolog 著者 Pavletich, N.P. 登録日 2011-05-20 公開日 2011-07-27 最終更新日 2024-02-28 実験手法 X-RAY DIFFRACTION (3.3 Å) 主引用文献 Structure of the FANCI-FANCD2 complex: insights into the Fanconi anemia DNA repair pathway. Science, 333, 2011
1K9G	Crystal Structure of the Complex of Cryptolepine-d(CCTAGG)2 分子名称: 5'-D(*CP*CP*TP*AP*GP*G)-3', 5-METHYL-5H-INDOLO[3,2-B]QUINOLINE 著者 Lisgarten, J.N, Coll, M, Portugal, J, Wright, C.W, Aymami, J. 登録日 2001-10-29 公開日 2001-11-30 最終更新日 2024-02-07 実験手法 X-RAY DIFFRACTION (1.4 Å) 主引用文献 The antimalarial and cytotoxic drug cryptolepine intercalates into DNA at cytosine-cytosine sites. Nat.Struct.Biol., 9, 2002
4ATH	MITF apo structure 分子名称: MICROPHTHALMIA-ASSOCIATED TRANSCRIPTION FACTOR, SULFATE ION 著者 Pogenberg, V, Milewski, M, Wilmanns, M. 登録日 2012-05-08 公開日 2012-12-12 最終更新日 2019-07-17 実験手法 X-RAY DIFFRACTION (1.95 Å) 主引用文献 Restricted Leucine Zipper Dimerization and Specificity of DNA Recognition of the Melanocyte Master Regulator Mitf Genes Dev., 26, 2012
7LIN	X-ray structure of SPOP MATH domain (D140G) in complex with a 53BP1 peptide 分子名称: SULFATE ION, Speckle-type POZ protein, TP53-binding protein 1 peptide 著者 Botuyan, M.V, Cui, G, Mer, G. 登録日 2021-01-27 公開日 2021-04-14 最終更新日 2023-10-18 実験手法 X-RAY DIFFRACTION (1.44 Å) 主引用文献 ATM-phosphorylated SPOP contributes to 53BP1 exclusion from chromatin during DNA replication. Sci Adv, 7, 2021
7LIO	X-ray structure of SPOP MATH domain (S119D) in complex with a 53BP1 peptide 分子名称: Speckle-type POZ protein, TP53-binding protein 1 peptide 著者 Botuyan, M.V, Cui, G, Mer, G. 登録日 2021-01-27 公開日 2021-04-14 最終更新日 2023-10-18 実験手法 X-RAY DIFFRACTION (3.01 Å) 主引用文献 ATM-phosphorylated SPOP contributes to 53BP1 exclusion from chromatin during DNA replication. Sci Adv, 7, 2021
7LIQ	X-ray structure of SPOP MATH domain (S119A) 分子名称: Speckle-type POZ protein 著者 Botuyan, M.V, Cui, G, Mer, G. 登録日 2021-01-27 公開日 2021-04-14 最終更新日 2023-10-18 実験手法 X-RAY DIFFRACTION (1.98 Å) 主引用文献 ATM-phosphorylated SPOP contributes to 53BP1 exclusion from chromatin during DNA replication. Sci Adv, 7, 2021
7LIP	X-ray structure of SPOP MATH domain (D140G) 分子名称: SULFATE ION, Speckle-type POZ protein 著者 Botuyan, M.V, Cui, G, Mer, G. 登録日 2021-01-27 公開日 2021-04-14 最終更新日 2023-10-18 実験手法 X-RAY DIFFRACTION (1.48 Å) 主引用文献 ATM-phosphorylated SPOP contributes to 53BP1 exclusion from chromatin during DNA replication. Sci Adv, 7, 2021
1UMU	STRUCTURE DETERMINATION OF UMUD' BY MAD PHASING OF THE SELENOMETHIONYL PROTEIN 分子名称: UMUD' 著者 Peat, T.S, Hendrickson, W.A. 登録日 1996-03-07 公開日 1996-08-01 最終更新日 2011-07-13 実験手法 X-RAY DIFFRACTION (2.5 Å) 主引用文献 Structure of the UmuD' protein and its regulation in response to DNA damage. Nature, 380, 1996
1GE8	PROLIFERATING CELL NUCLEAR ANTIGEN (PCNA) HOMOLOG FROM PYROCOCCUS FURIOSUS 分子名称: PROLIFERATION CELL NUCLEAR ANTIGEN 著者 Matsumiya, S, Ishino, Y, Morikawa, K. 登録日 2000-10-18 公開日 2001-01-24 最終更新日 2023-12-27 実験手法 X-RAY DIFFRACTION (2.1 Å) 主引用文献 Crystal structure of an archaeal DNA sliding clamp: proliferating cell nuclear antigen from Pyrococcus furiosus. Protein Sci., 10, 2001
3L51	Crystal Structure of the Mouse Condensin Hinge Domain 分子名称: GLYCEROL, Structural maintenance of chromosomes protein 2, Structural maintenance of chromosomes protein 4 著者 Griese, J.J, Hopfner, K.-P. 登録日 2009-12-21 公開日 2010-02-16 最終更新日 2011-07-13 実験手法 X-RAY DIFFRACTION (1.506 Å) 主引用文献 Structure and DNA binding activity of the mouse condensin hinge domain highlight common and diverse features of SMC proteins Nucleic Acids Res., 38, 2010
1V66	Solution structure of human p53 binding domain of PIAS-1 分子名称: Protein inhibitor of activated STAT protein 1 著者 Okubo, S, Hara, F, Tsuchida, Y, Shimotakahara, S, Suzuki, S, Hatanaka, H, Yokoyama, S, Tanaka, H, Yasuda, H, Shindo, H, RIKEN Structural Genomics/Proteomics Initiative (RSGI) 登録日 2003-11-27 公開日 2004-12-07 最終更新日 2023-12-27 実験手法 SOLUTION NMR 主引用文献 NMR structure of the N-terminal domain of SUMO ligase PIAS1 and its interaction with tumor suppressor p53 and A/T-rich DNA oligomers J.Biol.Chem., 279, 2004
2LUN	RNA Aptamer for B. anthracis Ribosomal Protein S8 分子名称: RNA (28-MER) 著者 Nikonowicz, E.P, Wang, J. 登録日 2012-06-18 公開日 2013-12-18 最終更新日 2024-05-15 実験手法 SOLUTION NMR 主引用文献 Structure and function of TatD exonuclease in DNA repair. Nucleic Acids Res., 42, 2014
5IU5	Lambda-[Ru(TAP)2(dppz)]2+ bound to d(TCGGCICCGA)2 分子名称: BARIUM ION, DNA (5'-D(*TP*CP*GP*GP*CP*IP*CP*CP*GP*A)-3'), Ru(tap)2(dppz) complex 著者 Hall, J.P, Cardin, C.J. 登録日 2016-03-17 公開日 2017-06-21 最終更新日 2024-05-08 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 Unexpected enhancement of sensitised photo-oxidation by a Ru(II) complex on replacement of guanine with inosine in DNA To Be Published
6V3X	Crystal structure of EED in complex with PALI1-K1241me3 peptide 分子名称: PALI1 peptide, Polycomb protein EED 著者 Zhang, Q, Davidovich, C. 登録日 2019-11-26 公開日 2021-05-26 最終更新日 2023-10-11 実験手法 X-RAY DIFFRACTION (1.7 Å) 主引用文献 PALI1 facilitates DNA and nucleosome binding by PRC2 and triggers an allosteric activation of catalysis. Nat Commun, 12, 2021
6V3Y	Crystal structure of EED in complex with PALI1-K1219me3 peptide 分子名称: PALI1 peptide, Polycomb protein EED 著者 Zhang, Q, Davidovich, C. 登録日 2019-11-26 公開日 2021-05-26 最終更新日 2023-10-11 実験手法 X-RAY DIFFRACTION (1.63 Å) 主引用文献 PALI1 facilitates DNA and nucleosome binding by PRC2 and triggers an allosteric activation of catalysis. Nat Commun, 12, 2021

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