PDB: 66507 件ウェブページステータス検索Chemie searchBIRD

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5WZF	Crystal structure of Mycobacterium tuberculosis VapC20 (Rv2549c), Sarcin-Ricin loop cleaving toxin 分子名称: 23S rRNA-specific endonuclease VapC20 著者 Thakur, K.G, Deep, A. 登録日 2017-01-17 公開日 2017-10-25 最終更新日 2023-03-01 実験手法 X-RAY DIFFRACTION (1.75 Å) 主引用文献 Crystal structure of Mycobacterium tuberculosis VapC20 toxin and its interactions with cognate antitoxin, VapB20, suggest a model for toxin-antitoxin assembly. FEBS J., 284, 2017
5W7X	Crystal Structure of FHA domain of human APLF in complex with XRCC1 bisphospho peptide 分子名称: Aprataxin and PNK-like factor, DNA repair protein XRCC1 著者 Pedersen, L.C, Kim, K, London, R.E. 登録日 2017-06-21 公開日 2018-05-02 最終更新日 2023-10-04 実験手法 X-RAY DIFFRACTION (2.005 Å) 主引用文献 Characterization of the APLF FHA-XRCC1 phosphopeptide interaction and its structural and functional implications. Nucleic Acids Res., 45, 2017
7RMZ	Room temperature X-ray structure of SARS-CoV-2 main protease (Mpro) in complex with HL-3-63 分子名称: 3C-like proteinase, 6-{4-[3-chloro-4-(trifluoromethyl)phenyl]piperazine-1-carbonyl}pyrimidine-2,4(1H,3H)-dione 著者 Kovalevsky, A, Kneller, D.W, Coates, L. 登録日 2021-07-28 公開日 2021-11-10 最終更新日 2023-10-18 実験手法 X-RAY DIFFRACTION (2.1 Å) 主引用文献 Structural, Electronic, and Electrostatic Determinants for Inhibitor Binding to Subsites S1 and S2 in SARS-CoV-2 Main Protease. J.Med.Chem., 64, 2021
7LRF	Netrin-1 in complex with SOS 分子名称: 1,2-ETHANEDIOL, 1,3,4,6-tetra-O-sulfo-beta-D-fructofuranose-(2-1)-2,3,4,6-tetra-O-sulfonato-alpha-D-glucopyranose, 2-[N-CYCLOHEXYLAMINO]ETHANE SULFONIC ACID, ... 著者 Gupta, M, McDougall, M, Torres, A.M, Stetefeld, J. 登録日 2021-02-16 公開日 2022-02-23 最終更新日 2023-10-25 実験手法 X-RAY DIFFRACTION (3.21 Å) 主引用文献 The dynamic nature of netrin-1 and the structural basis for glycosaminoglycan fragment-induced filament formation. Nat Commun, 14, 2023
5WQW	X-ray structure of catalytic domain of autolysin from Clostridium perfringens 分子名称: 1,2-ETHANEDIOL, N-acetylglucosaminidase 著者 Tamai, E, Sekiya, H, Goda, E, Makihata, N, Maki, J, Yoshida, H, Kamitori, S. 登録日 2016-11-29 公開日 2016-12-07 最終更新日 2024-03-20 実験手法 X-RAY DIFFRACTION (1.76 Å) 主引用文献 Structural and biochemical characterization of the Clostridium perfringens autolysin catalytic domain FEBS Lett., 591, 2017
7PX5	ATAD2 in complex with 1-Methyl-2-quinolone 分子名称: 1,2-ETHANEDIOL, 1-METHYLQUINOLIN-2(1H)-ONE, ATPase family AAA domain-containing protein 2, ... 著者 Martin, M.P, Noble, M.E.N. 登録日 2021-10-07 公開日 2022-11-02 最終更新日 2024-01-31 実験手法 X-RAY DIFFRACTION (2.18 Å) 主引用文献 Exiting the tunnel of uncertainty: crystal soak to validated hit. Acta Crystallogr D Struct Biol, 78, 2022
5I9N	Crystal structure of B. pseudomallei FabI in complex with NAD and PT412 分子名称: 5-ethyl-4-fluoro-2-(2-nitrophenoxy)phenol, Enoyl-[acyl-carrier-protein] reductase [NADH], NICOTINAMIDE-ADENINE-DINUCLEOTIDE 著者 Hirschbeck, M.W, Eltschkner, S, Tonge, P.J, Kisker, C. 登録日 2016-02-20 公開日 2017-02-22 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (2.512 Å) 主引用文献 Rationalizing the Binding Kinetics for the Inhibition of the Burkholderia pseudomallei FabI1 Enoyl-ACP Reductase. Biochemistry, 56, 2017
5IR1	Cetuximab Fab in complex with 3-bromophenylalanine meditope variant 分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Cetuximab Fab heavy chain, Cetuximab Fab light chain, ... 著者 Bzymek, K.P, Williams, J.C. 登録日 2016-03-11 公開日 2016-10-26 最終更新日 2023-09-27 実験手法 X-RAY DIFFRACTION (2.482 Å) 主引用文献 Natural and non-natural amino-acid side-chain substitutions: affinity and diffraction studies of meditope-Fab complexes. Acta Crystallogr F Struct Biol Commun, 72, 2016
7TUU	Structure of the SARS-CoV-2 main protease in complex with halicin 分子名称: 3C-like proteinase nsp5, 5-nitro-1,3-thiazole 著者 Yang, K.S, Liu, W.R. 登録日 2022-02-03 公開日 2022-08-03 最終更新日 2023-10-18 実験手法 X-RAY DIFFRACTION (1.85 Å) 主引用文献 Repurposing Halicin as a potent covalent inhibitor for the SARS-CoV-2 main protease. Curr Res Chem Biol, 2, 2022
5WCE	Caulobacter crescentus pol III beta 分子名称: DNA polymerase III subunit beta 著者 Oakley, A.J. 登録日 2017-06-30 公開日 2017-07-26 最終更新日 2023-10-04 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 Crystal structure of Pol III beta from Caulobacter crescentus To Be Published
1ZD0	Crystal structure of Pfu-542154 conserved hypothetical protein 分子名称: MAGNESIUM ION, METHANOL, UNKNOWN ATOM OR ION, ... 著者 Habel, J.E, Liu, Z.J, Horanyi, P.S, Florence, Q.J.T, Tempel, W, Zhou, W, Chen, L, Lee, D, Nguyen, J, Chang, S.H, Bereton, P, Izumi, M, Jenny Jr, F.E, Poole II, F.L, Shah, C, Sugar, F.J, Adams, M.W.W, Rose, J.P, Wang, B.C, Southeast Collaboratory for Structural Genomics (SECSG) 登録日 2005-04-13 公開日 2005-05-17 最終更新日 2017-10-11 実験手法 X-RAY DIFFRACTION (1.7 Å) 主引用文献 Crystal structure of Pfu-542154 conserved hypothetical protein To be Published
5JL4	Inhibitor resistant mutant catalytic core domain of HIV-1 Integrase 分子名称: Integrase, SULFATE ION 著者 Feng, L, Kobe, M, Kvaratskhelia, M. 登録日 2016-04-26 公開日 2017-10-04 最終更新日 2023-09-27 実験手法 X-RAY DIFFRACTION (1.758 Å) 主引用文献 Resistance to pyridine-based inhibitor KF116 reveals an unexpected role of integrase in HIV-1 Gag-Pol polyprotein proteolytic processing. J. Biol. Chem., 292, 2017
7TEH	Room temperature X-ray structure of SARS-CoV-2 main protease (3CL Mpro) in complex with BBH-2 分子名称: (1R,2S,5S)-3-[N-(tert-butylcarbamoyl)-3-methyl-L-valyl]-N-{(1Z,2S)-1-imino-3-[(3S)-2-oxopyrrolidin-3-yl]propan-2-yl}-6,6-dimethyl-3-azabicyclo[3.1.0]hexane-2-carboxamide, 3C-like proteinase 著者 Kovalevsky, A, Kneller, D.W, Coates, L. 登録日 2022-01-05 公開日 2022-03-02 最終更新日 2023-10-18 実験手法 X-RAY DIFFRACTION (1.8 Å) 主引用文献 Covalent narlaprevir- and boceprevir-derived hybrid inhibitors of SARS-CoV-2 main protease Nat Commun, 13, 2022
7TFR	Room temperature X-ray structure of SARS-CoV-2 main protease (3CL Mpro) in complex with NBH-2 分子名称: (1R,2S,5S)-N-{(1Z,2S)-1-imino-3-[(3S)-2-oxopyrrolidin-3-yl]propan-2-yl}-6,6-dimethyl-3-[3-methyl-N-({1-[(2-methylpropane-2-sulfonyl)methyl]cyclohexyl}carbamoyl)-L-valyl]-3-azabicyclo[3.1.0]hexane-2-carboxamide, 3C-like proteinase 著者 Kovalevsky, A, Kneller, D.W, Coates, L. 登録日 2022-01-07 公開日 2022-03-02 最終更新日 2023-10-18 実験手法 X-RAY DIFFRACTION (1.8 Å) 主引用文献 Covalent narlaprevir- and boceprevir-derived hybrid inhibitors of SARS-CoV-2 main protease Nat Commun, 13, 2022
5YV7	Racemic X-ray Structure of Calcicludine 分子名称: Kunitz-type serine protease inhibitor homolog calcicludine 著者 Shuai, G, Qian, Q, Lei, L. 登録日 2017-11-24 公開日 2017-12-27 最終更新日 2023-11-22 実験手法 X-RAY DIFFRACTION (2.395 Å) 主引用文献 Racemic X-ray Structure of Calcicludine To Be Published
5JEM	Complex of IRF-3 with CBP 分子名称: CREB-binding protein, Interferon regulatory factor 3 著者 Zhao, B, Li, P. 登録日 2016-04-18 公開日 2016-06-15 最終更新日 2024-03-06 実験手法 X-RAY DIFFRACTION (2.5 Å) 主引用文献 Structural basis for concerted recruitment and activation of IRF-3 by innate immune adaptor proteins. Proc.Natl.Acad.Sci.USA, 113, 2016
5JG9	Crystal structure of the de novo mini protein gEHEE_06 分子名称: CHLORIDE ION, GLYCEROL, de novo design, ... 著者 Rupert, P.B, Johnsen, W.A. 登録日 2016-04-19 公開日 2016-09-28 最終更新日 2016-11-02 実験手法 X-RAY DIFFRACTION (2.09 Å) 主引用文献 Accurate de novo design of hyperstable constrained peptides. Nature, 538, 2016
7KC8	Salivary protein from Culex quinquefasciatus that belongs to the Cysteins and Tryptophan-Rich (CWRC) family 分子名称: 16.4 kDa salivary peptide, ACETIC ACID 著者 Garboczi, D.N, Gittis, A.G, Kern, O, Martin-Martin, I. 登録日 2020-10-05 公開日 2021-06-02 最終更新日 2024-04-03 実験手法 X-RAY DIFFRACTION (2.3 Å) 主引用文献 The structures of two salivary proteins from the West Nile vector Culex quinquefasciatus reveal a beta-trefoil fold with putative sugar binding properties Curr Res Struct Biol, 3, 2021
7DCF	Crystal structure of EHMT2 SET domain in complex with compound 10 分子名称: 5'-methoxy-6'-(1-methyl-2,3,4,7-tetrahydroazepin-5-yl)spiro[cyclobutane-1,3'-indole]-2'-amine, Histone-lysine N-methyltransferase EHMT2, S-ADENOSYLMETHIONINE, ... 著者 Suzuki, M, Katayama, K. 登録日 2020-10-26 公開日 2021-02-10 最終更新日 2024-03-27 実験手法 X-RAY DIFFRACTION (1.8 Å) 主引用文献 Discovery of DS79932728: A Potent, Orally Available G9a/GLP Inhibitor for Treating beta-Thalassemia and Sickle Cell Disease. Acs Med.Chem.Lett., 12, 2021
7JOF	Calcium-bound C2A Domain from Human Dysferlin 分子名称: CALCIUM ION, Isoform 6 of Dysferlin 著者 Tadayon, R, Wang, Y, Santamaria, L, Mercier, P, Forristal, C, Shaw, G.S. 登録日 2020-08-06 公開日 2021-06-16 最終更新日 2023-10-18 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Calcium binds and rigidifies the dysferlin C2A domain in a tightly coupled manner. Biochem.J., 478, 2021
7SBN	Human glutaminase C (Y466W) with L-Gln, closed conformation 分子名称: GLUTAMINE, Isoform 3 of Glutaminase kidney isoform, mitochondrial 著者 Nguyen, T.-T.T, Cerione, R.A. 登録日 2021-09-25 公開日 2022-02-02 最終更新日 2023-10-18 実験手法 X-RAY DIFFRACTION (2.14 Å) 主引用文献 High-resolution structures of mitochondrial glutaminase C tetramers indicate conformational changes upon phosphate binding. J.Biol.Chem., 298, 2022
5IVZ	Cetuximab Fab in complex with Arg8Cir meditope variant 分子名称: Cetuximab Fab, heavy chain, light chain, ... 著者 Bzymek, K.P, Williams, J.C. 登録日 2016-03-21 公開日 2016-10-26 最終更新日 2023-11-15 実験手法 X-RAY DIFFRACTION (2.48 Å) 主引用文献 Natural and non-natural amino-acid side-chain substitutions: affinity and diffraction studies of meditope-Fab complexes. Acta Crystallogr F Struct Biol Commun, 72, 2016
7SBM	Human glutaminase C (Y466W) with L-Gln, open conformation 分子名称: GLUTAMINE, Isoform 3 of Glutaminase kidney isoform, mitochondrial 著者 Nguyen, T.-T.T, Cerione, R.A. 登録日 2021-09-25 公開日 2022-02-02 最終更新日 2023-10-18 実験手法 X-RAY DIFFRACTION (2.8 Å) 主引用文献 High-resolution structures of mitochondrial glutaminase C tetramers indicate conformational changes upon phosphate binding. J.Biol.Chem., 298, 2022
5IX9	Cell surface anchoring domain 分子名称: Antifreeze protein 著者 Guo, S, Langelaan, D. 登録日 2016-03-23 公開日 2017-06-28 最終更新日 2024-05-01 実験手法 SOLUTION NMR 主引用文献 Structure of a 1.5-MDa adhesin that binds its Antarctic bacterium to diatoms and ice. Sci Adv, 3, 2017
5J1D	X-ray crystal structure of Phosphate binding protein (PBP) from Stenotrophomonas maltophilia 分子名称: GLYCEROL, PHOSPHATE ION, Phosphate binding protein 著者 Hatti, K, Gulati, A, Narayanswamy, S, Murthy, M.R.N. 登録日 2016-03-29 公開日 2016-10-05 最終更新日 2023-11-08 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 Determination of crystal structures of proteins of unknown identity using a marathon molecular replacement procedure: structure of Stenotrophomonas maltophilia phosphate-binding protein. Acta Crystallogr D Struct Biol, 72, 2016

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