PDB: 217686 件ウェブページステータス検索Chemie searchBIRD

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6YKD	Human Pim-1 kinase in complex with an inhibitor identified by virtual screening 分子名称: ACETATE ION, GLYCEROL, Serine/threonine-protein kinase pim-1, ... 著者 Schneider, P, Welin, M, Svensson, B, Walse, B, Schneider, G. 登録日 2020-04-06 公開日 2020-07-01 最終更新日 2024-01-24 実験手法 X-RAY DIFFRACTION (1.86 Å) 主引用文献 Virtual Screening and Design with Machine Intelligence Applied to Pim-1 Kinase Inhibitors. Mol Inform, 39, 2020
8OZN	In situ cryoEM structure of the Prototype Foamy Virus capsid, hexamer 2 localised reconstruction 分子名称: Gag polyprotein 著者 Calcraft, T, Nans, A, Rosenthal, P.B. 登録日 2023-05-09 公開日 2024-07-10 最終更新日 2024-08-21 実験手法 ELECTRON MICROSCOPY (3.5 Å) 主引用文献 Integrated cryoEM structure of a spumaretrovirus reveals cross-kingdom evolutionary relationships and the molecular basis for assembly and virus entry. Cell, 187, 2024
8OZL	In situ cryoEM structure of the Prototype Foamy Virus capsid, pentamer localised reconstruction 分子名称: Gag polyprotein 著者 Calcraft, T, Nans, A, Rosenthal, P.B. 登録日 2023-05-09 公開日 2024-07-10 最終更新日 2024-08-21 実験手法 ELECTRON MICROSCOPY (3.4 Å) 主引用文献 Integrated cryoEM structure of a spumaretrovirus reveals cross-kingdom evolutionary relationships and the molecular basis for assembly and virus entry. Cell, 187, 2024
8OZK	In situ cryoEM structure of the Prototype Foamy Virus capsid, icosahedral map 分子名称: Gag polyprotein 著者 Calcraft, T, Nans, A, Rosenthal, P.B. 登録日 2023-05-09 公開日 2024-07-10 最終更新日 2024-08-21 実験手法 ELECTRON MICROSCOPY (3.89 Å) 主引用文献 Integrated cryoEM structure of a spumaretrovirus reveals cross-kingdom evolutionary relationships and the molecular basis for assembly and virus entry. Cell, 187, 2024
7T7A	Crystal Structure of Human SHOC2: A Leucine-Rich Repeat Protein 分子名称: Leucine-rich repeat protein SHOC-2, MAGNESIUM ION, NITRATE ION 著者 Hajian, B, Lemke, C, Kwon, J, Bian, Y, Fuller, C, Aguirre, J. 登録日 2021-12-14 公開日 2022-05-04 最終更新日 2024-05-22 実験手法 X-RAY DIFFRACTION (1.79 Å) 主引用文献 Structure-function analysis of the SHOC2-MRAS-PP1C holophosphatase complex. Nature, 609, 2022
8CWM	Cryo-EM structure of the supercoiled S. islandicus REY15A archaeal flagellar filament 分子名称: Flagellin 著者 Kreutzberger, M.A.B, Liu, J, Krupovic, M, Egelman, E.H. 登録日 2022-05-19 公開日 2022-09-07 最終更新日 2024-06-12 実験手法 ELECTRON MICROSCOPY (3.4 Å) 主引用文献 Convergent evolution in the supercoiling of prokaryotic flagellar filaments. Cell, 185, 2022
7B17	SARS-CoV-spike RBD bound to two neutralising nanobodies. 分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, SARS-CoV-2 neutralizing biparatopic nanobody VE,nanobody E from Lama glama,SARS-CoV-2 neutralizing biparatopic nanobody VE,nanobody E from Lama glama, Spike protein S1 著者 Hallberg, B.M, Das, H. 登録日 2020-11-23 公開日 2021-02-10 最終更新日 2022-12-21 実験手法 ELECTRON MICROSCOPY (4.01 Å) 主引用文献 Structure-guided multivalent nanobodies block SARS-CoV-2 infection and suppress mutational escape Science, 371, 2021
6OUO	RF2 accommodated state bound 70S complex at long incubation time 分子名称: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S10, ... 著者 Fu, Z, Indrisiunaite, G, Kaledhonkar, S, Shah, B, Sun, M, Chen, B, Grassucci, R.A, Ehrenberg, M, Frank, J. 登録日 2019-05-05 公開日 2019-06-19 最終更新日 2024-03-20 実験手法 ELECTRON MICROSCOPY (3.7 Å) 主引用文献 The structural basis for release-factor activation during translation termination revealed by time-resolved cryogenic electron microscopy. Nat Commun, 10, 2019
4X5P	Crystal structure of FimH in complex with a benzoyl-amidophenyl alpha-D-mannopyranoside 分子名称: 4-{[3-chloro-4-(alpha-D-mannopyranosyloxy)phenyl]carbamoyl}benzoic acid, Protein FimH 著者 Preston, R.C, Jakob, R.P, Fiege, B, Zihlmann, P, Rabbani, S, Schwardt, O, Jiang, X, Ernst, B, Maier, T. 登録日 2014-12-05 公開日 2015-05-20 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (0.997 Å) 主引用文献 The Tyrosine Gate of the Bacterial Lectin FimH: A Conformational Analysis by NMR Spectroscopy and X-ray Crystallography. Chembiochem, 16, 2015
6YR4	Dye-type peroxidase DtpB in the ferryl state: Spectroscopically Validated composite structure 分子名称: MAGNESIUM ION, OXYGEN ATOM, PROTOPORPHYRIN IX CONTAINING FE, ... 著者 Lucic, M, Dworkowski, F.S.N, Worrall, J.A.R, Hough, M.A. 登録日 2020-04-19 公開日 2021-01-13 最終更新日 2024-05-01 実験手法 X-RAY DIFFRACTION (1.85 Å) 主引用文献 Serial Femtosecond Zero Dose Crystallography Captures a Water-Free Distal Heme Site in a Dye-Decolorising Peroxidase to Reveal a Catalytic Role for an Arginine in Fe IV =O Formation. Angew.Chem.Int.Ed.Engl., 59, 2020
1BDW	GRAMICIDIN D FROM BACILLUS BREVIS (ACTIVE FORM) 分子名称: ACETIC ACID, GRAMICIDIN A 著者 Burkhart, B.M, Pangborn, W.A, Duax, W.L. 登録日 1998-05-11 公開日 1998-10-14 最終更新日 2023-11-15 実験手法 X-RAY DIFFRACTION (1.7 Å) 主引用文献 The Conducting Form of Gramicidin a is a Right-Handed Double-Stranded Double Helix. Proc.Natl.Acad.Sci.USA, 95, 1998
6M2I	Structure of the 2-Aminoisobutyric acid Monooxygenase Hydroxylase 分子名称: 1,2-ETHANEDIOL, Amidohydrolase, FE (III) ION, ... 著者 Hibi, M, Mikami, B, Ogawa, J. 登録日 2020-02-27 公開日 2021-01-06 最終更新日 2023-11-29 実験手法 X-RAY DIFFRACTION (2.45 Å) 主引用文献 A three-component monooxygenase from Rhodococcus wratislaviensis may expand industrial applications of bacterial enzymes. Commun Biol, 4, 2021
7TBM	Composite structure of the dilated human nuclear pore complex (NPC) generated with a 37A in situ cryo-ET map of CD4+ T cell NPC 分子名称: DDX19, NUP107 CTD, NUP107 NTD, ... 著者 Bley, C.J, Nie, S, Mobbs, G.W, Petrovic, S, Gres, A.T, Liu, X, Mukherjee, S, Harvey, S, Huber, F.M, Lin, D.H, Brown, B, Tang, A.W, Rundlet, E.J, Correia, A.R, Chen, S, Regmi, S.G, Stevens, T.A, Jette, C.A, Dasso, M, Patke, A, Palazzo, A.F, Kossiakoff, A.A, Hoelz, A. 登録日 2021-12-22 公開日 2022-06-15 最終更新日 2022-06-22 実験手法 ELECTRON MICROSCOPY (37 Å) 主引用文献 Architecture of the cytoplasmic face of the nuclear pore. Science, 376, 2022
7TBK	Composite structure of the dilated human nuclear pore complex (NPC) symmetric core generated with a 37A in situ cryo-ET map of CD4+ T cell NPC 分子名称: NUP107 CTD, NUP107 NTD, NUP133, ... 著者 Petrovic, S, Samanta, D, Perriches, T, Bley, C.J, Thierbach, K, Brown, B, Nie, S, Mobbs, G.W, Stevens, T.A, Liu, X, Tomaleri, G.P, Schaus, L, Hoelz, A. 登録日 2021-12-22 公開日 2022-06-15 最終更新日 2022-06-22 実験手法 ELECTRON MICROSCOPY (37 Å) 主引用文献 Architecture of the linker-scaffold in the nuclear pore. Science, 376, 2022
7TBI	Composite structure of the S. cerevisiae nuclear pore complex (NPC) 分子名称: Dyn2, Nic96 R1, Nic96 R2, ... 著者 Petrovic, S, Samanta, D, Perriches, T, Bley, C.J, Thierbach, K, Brown, B, Nie, S, Mobbs, G.W, Stevens, T.A, Liu, X, Tomaleri, G.P, Schaus, L, Hoelz, A. 登録日 2021-12-22 公開日 2022-06-15 最終更新日 2022-06-22 実験手法 ELECTRON MICROSCOPY (25 Å) 主引用文献 Architecture of the linker-scaffold in the nuclear pore. Science, 376, 2022
6UYD	Structure of Hepatitis C Virus Envelope Glycoprotein E2mc3-v1 redesigned core from genotype 1a bound to broadly neutralizing antibody AR3C 分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Envelope glycoprotein E2, ... 著者 Tzarum, N, Wilson, I.A, Zhu, J. 登録日 2019-11-13 公開日 2020-04-22 最終更新日 2023-10-11 実験手法 X-RAY DIFFRACTION (1.897 Å) 主引用文献 Proof of concept for rational design of hepatitis C virus E2 core nanoparticle vaccines. Sci Adv, 6, 2020
7SQ4	Designed trefoil knot protein, variant 2 分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, Designed trefoil knot protein, variant 2, ... 著者 Takushi, B, Doyle, L, Stoddard, B.L, Bradley, P. 登録日 2021-11-04 公開日 2022-06-29 最終更新日 2024-04-03 実験手法 X-RAY DIFFRACTION (1.493 Å) 主引用文献 De novo design of knotted tandem repeat proteins. Nat Commun, 14, 2023
8PN6	Crystal Structure of co-expressed NS2B-NS3 Protease from Zika Virus 分子名称: Genome polyprotein, Serine protease subunit NS2B 著者 Ni, X, Fairhead, M, Balcomb, B.H, Aschenbrenner, J.C, Ferreira, L.M, Godoy, A.S, Lithgo, R.M, MacLean, E.M, Marples, P.G, Thompson, W, Tomlinson, C.W.E, Szommer, T, Wild, C, Wright, N.D, Koekemoer, L, Fearon, D, Walsh, M.A, von Delft, F. 登録日 2023-06-29 公開日 2023-08-16 最終更新日 2024-08-14 実験手法 X-RAY DIFFRACTION (1.61 Å) 主引用文献 Crystal Structure of co-expressed NS2B-NS3 Protease from Zika Virus To Be Published
7SQ3	Designed trefoil knot protein, variant 1 分子名称: CHLORIDE ION, Designed trefoil knot protein, variant 1, ... 著者 Takushi, B, Doyle, L, Stoddard, B.L, Bradley, P. 登録日 2021-11-04 公開日 2022-06-29 最終更新日 2024-04-03 実験手法 X-RAY DIFFRACTION (2.453 Å) 主引用文献 De novo design of knotted tandem repeat proteins. Nat Commun, 14, 2023
7AGY	Structure of the N-domain of the K+/H+ antiporter subunit KhtT at pH 8.5 分子名称: K(+)/H(+) antiporter subunit KhtT 著者 Cereija, T.B, Morais-Cabral, J.H. 登録日 2020-09-23 公開日 2021-03-31 最終更新日 2024-01-31 実験手法 X-RAY DIFFRACTION (1.54 Å) 主引用文献 c-di-AMP, a likely master regulator of bacterial K + homeostasis machinery, activates a K + exporter. Proc.Natl.Acad.Sci.USA, 118, 2021
7AHT	Structure of the N-domain of the K+/H+ antiporter subunit KhtT at pH 7.5 分子名称: K(+)/H(+) antiporter subunit KhtT 著者 Cereija, T.B, Morais-Cabral, J.H. 登録日 2020-09-25 公開日 2021-03-31 最終更新日 2024-01-31 実験手法 X-RAY DIFFRACTION (2.16 Å) 主引用文献 c-di-AMP, a likely master regulator of bacterial K + homeostasis machinery, activates a K + exporter. Proc.Natl.Acad.Sci.USA, 118, 2021
7AGW	Structure of the N-domain of the K+/H+ antiporter subunit KhtT at pH 6.5 分子名称: K(+)/H(+) antiporter subunit KhtT 著者 Cereija, T.B, Morais-Cabral, J.H. 登録日 2020-09-23 公開日 2021-03-31 最終更新日 2024-01-31 実験手法 X-RAY DIFFRACTION (1.511 Å) 主引用文献 c-di-AMP, a likely master regulator of bacterial K + homeostasis machinery, activates a K + exporter. Proc.Natl.Acad.Sci.USA, 118, 2021
7TFA	P. polymyxa GS(12)-Q-GlnR peptide 分子名称: GLUTAMINE, GlnR C-tail peptide, Glutamine synthetase, ... 著者 Travis, B.A, Peck, J, Schumacher, M.A. 登録日 2022-01-06 公開日 2022-06-29 最終更新日 2024-02-28 実験手法 ELECTRON MICROSCOPY (2.07 Å) 主引用文献 Molecular dissection of the glutamine synthetase-GlnR nitrogen regulatory circuitry in Gram-positive bacteria. Nat Commun, 13, 2022
7TF6	S. aureus GS(12)-Q-GlnR peptide 分子名称: GLUTAMINE, Glutamine synthetase, MAGNESIUM ION, ... 著者 Travis, B.A, Peck, J, Schumacher, M.A. 登録日 2022-01-06 公開日 2022-06-29 最終更新日 2024-02-28 実験手法 ELECTRON MICROSCOPY (2.15 Å) 主引用文献 Molecular dissection of the glutamine synthetase-GlnR nitrogen regulatory circuitry in Gram-positive bacteria. Nat Commun, 13, 2022
7TFE	L. monocytogenes GS(12) - apo 分子名称: Glutamine synthetase, MAGNESIUM ION 著者 Travis, B.A, Peck, J, Schumacher, M.A. 登録日 2022-01-06 公開日 2022-06-29 最終更新日 2024-02-28 実験手法 ELECTRON MICROSCOPY (2.85 Å) 主引用文献 Molecular dissection of the glutamine synthetase-GlnR nitrogen regulatory circuitry in Gram-positive bacteria. Nat Commun, 13, 2022

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