Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

6MJP
DownloadVisualize
BU of 6mjp by Molmil
LptB(E163Q)FGC from Vibrio cholerae
分子名称: 2-(2-ETHOXYETHOXY)ETHANOL, 6-cyclohexylhexyl beta-D-glucopyranoside, ABC transporter ATP-binding protein, ...
著者Owens, T.W, Kahne, D, Kruse, A.C.
登録日2018-09-21
公開日2019-03-27
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.85 Å)
主引用文献Structural basis of unidirectional export of lipopolysaccharide to the cell surface.
Nature, 567, 2019
4XPZ
DownloadVisualize
BU of 4xpz by Molmil
Structure of fission yeast RNA polymerase II CTD phosphatase Fcp1-R271A bound to aluminum fluoride
分子名称: ALUMINUM FLUORIDE, MAGNESIUM ION, RNA polymerase II subunit A C-terminal domain phosphatase, ...
著者Ghosh, A, Lima, C.D.
登録日2015-01-18
公開日2015-03-04
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.45 Å)
主引用文献Genetic and structural analysis of the essential fission yeast RNA polymerase II CTD phosphatase Fcp1.
Rna, 21, 2015
7ZVF
DownloadVisualize
BU of 7zvf by Molmil
Crystal structure of human cathepsin L in complex with covalently bound CLIK148
分子名称: (2S)-N-[(2S)-1-(dimethylamino)-1-oxidanylidene-3-phenyl-propan-2-yl]-2-oxidanyl-N'-(2-pyridin-2-ylethyl)butanediamide, 1,2-ETHANEDIOL, Cathepsin L, ...
著者Falke, S, Lieske, J, Guenther, S, Reinke, P.Y.A, Ewert, W, Loboda, J, Karnicar, K, Usenik, A, Lindic, N, Sekirnik, A, Tsuge, H, Chapman, H.N, Hinrichs, W, Turk, D, Meents, A.
登録日2022-05-15
公開日2023-11-29
最終更新日2024-05-22
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Structural Elucidation and Antiviral Activity of Covalent Cathepsin L Inhibitors.
J.Med.Chem., 67, 2024
5J4O
DownloadVisualize
BU of 5j4o by Molmil
Structure of human erythrocytic Spectrin alpha chain repeats 16-17
分子名称: 1,2-ETHANEDIOL, Spectrin alpha chain, erythrocytic 1, ...
著者Cutts, E.E, Vakonakis, I.
登録日2016-04-01
公開日2017-04-12
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.54 Å)
主引用文献Interactions of Plasmodium falciparum KAHRP and PfEMP1 with the host cytoskeleton suggest a model for cytoadherent protrusions on the infected erythrocyte surface
To Be Published
5JAN
DownloadVisualize
BU of 5jan by Molmil
Exploitation of a Novel Binding Pocket in Human Lipoprotein-Associated Phospholipase A2 (Lp-PLA2) Discovered Through X-Ray Fragment Screening
分子名称: 1,3-dimethyl-6-(2-methylpropoxy)pyrimidine-2,4(1H,3H)-dione, CALCIUM ION, CHLORIDE ION, ...
著者Day, P.J.
登録日2016-04-12
公開日2016-05-25
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (2.12 Å)
主引用文献Exploitation of a Novel Binding Pocket in Human Lipoprotein-Associated Phospholipase A2 (Lp-PLA2) Discovered through X-ray Fragment Screening.
J.Med.Chem., 59, 2016
5JAT
DownloadVisualize
BU of 5jat by Molmil
Exploitation of a Novel Binding Pocket in Human Lipoprotein-Associated Phospholipase A2 (Lp-PLA2) Discovered Through X-Ray Fragment Screening
分子名称: 3-{2-[(2',6-dimethyl[1,1'-biphenyl]-3-yl)amino]-1,3-thiazol-4-yl}propan-1-ol, CHLORIDE ION, DIMETHYL SULFOXIDE, ...
著者Day, P.J.
登録日2016-04-12
公開日2016-05-25
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (2.04 Å)
主引用文献Exploitation of a Novel Binding Pocket in Human Lipoprotein-Associated Phospholipase A2 (Lp-PLA2) Discovered through X-ray Fragment Screening.
J.Med.Chem., 59, 2016
7SNO
DownloadVisualize
BU of 7sno by Molmil
Structure of Bacple_01701(H214N), a 6-O-galactose porphyran sulfatase
分子名称: 1,2-ETHANEDIOL, 6-O-sulfo-alpha-L-galactopyranose-(1-3)-beta-D-galactopyranose-(1-4)-6-O-sulfo-alpha-L-galactopyranose-(1-3)-beta-D-galactopyranose, Arylsulfatase, ...
著者Ulaganathan, T, Cygler, M.
登録日2021-10-28
公開日2022-10-05
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献The porphyran degradation system of the human gut microbiota is complete, phylogenetically diverse and geographically structured across Asian populations
Biorxiv, 2023
8IWW
DownloadVisualize
BU of 8iww by Molmil
hSPCA1 in the CaE1P-ADP state
分子名称: ADENOSINE-5'-DIPHOSPHATE, CALCIUM ION, Calcium-transporting ATPase type 2C member 1, ...
著者Liu, Z.M, Wu, M.Q, Wu, C.
登録日2023-03-31
公開日2023-12-27
実験手法ELECTRON MICROSCOPY (3.71 Å)
主引用文献Structure and transport mechanism of the human calcium pump SPCA1.
Cell Res., 33, 2023
8IWU
DownloadVisualize
BU of 8iwu by Molmil
hSPCA1 in the E2~P state
分子名称: Calcium-transporting ATPase type 2C member 1, MAGNESIUM ION, TETRAFLUOROALUMINATE ION
著者Liu, Z.M, Wu, M.Q, Wu, C.
登録日2023-03-31
公開日2023-12-27
実験手法ELECTRON MICROSCOPY (3.31 Å)
主引用文献Structure and transport mechanism of the human calcium pump SPCA1.
Cell Res., 33, 2023
7SNJ
DownloadVisualize
BU of 7snj by Molmil
Structure of Bacple_01701, a 6-O-galactose porphyran sulfatase
分子名称: 1,2-ETHANEDIOL, 1-ETHOXY-2-(2-ETHOXYETHOXY)ETHANE, Arylsulfatase, ...
著者Ulaganathan, T, Cygler, M.
登録日2021-10-28
公開日2022-10-05
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.74 Å)
主引用文献The porphyran degradation system of the human gut microbiota is complete, phylogenetically diverse and geographically structured across Asian populations
Biorxiv, 2023
5JE2
DownloadVisualize
BU of 5je2 by Molmil
Crystal structure of Burkholderia glumae ToxA Y7F mutant with bound S-adenosylhomocysteine (SAH)
分子名称: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, DIMETHYL SULFOXIDE, Methyl transferase, ...
著者Fenwick, M.K, Philmus, B, Begley, T.P, Ealick, S.E.
登録日2016-04-17
公開日2016-05-11
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (1.519 Å)
主引用文献Burkholderia glumae ToxA Is a Dual-Specificity Methyltransferase That Catalyzes the Last Two Steps of Toxoflavin Biosynthesis.
Biochemistry, 55, 2016
4QJ5
DownloadVisualize
BU of 4qj5 by Molmil
Structure of a fragment of human phospholipase C-beta3 delta472-581, bound to IP3 and in complex with Galphaq
分子名称: 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-3, CALCIUM ION, D-MYO-INOSITOL-1,4,5-TRIPHOSPHATE, ...
著者Lyon, A.M, Tesmer, J.J.G.
登録日2014-06-03
公開日2014-10-22
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (3.41 Å)
主引用文献Molecular mechanisms of phospholipase C beta 3 autoinhibition.
Structure, 22, 2014
4XYZ
DownloadVisualize
BU of 4xyz by Molmil
Crystal structure of K33 linked di-Ubiquitin
分子名称: 1,2-ETHANEDIOL, ACETATE ION, IODIDE ION, ...
著者Kristariyanto, Y.A, Abdul Rehman, S.A, Choi, S.Y, Ritorto, S, Campbell, D.G, Morrice, N.A, Toth, R, Kulathu, Y.
登録日2015-02-03
公開日2015-03-18
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献Assembly and structure of Lys33-linked polyubiquitin reveals distinct conformations.
Biochem.J., 467, 2015
6UXR
DownloadVisualize
BU of 6uxr by Molmil
Crystal structure of BAK core domain BH3-groove-dimer in complex with LysoPC
分子名称: Bcl-2 homologous antagonist/killer, TETRAETHYLENE GLYCOL, TRIETHYLENE GLYCOL, ...
著者Cowan, A.D, Colman, P.M, Czabotar, P.E.
登録日2019-11-07
公開日2020-09-02
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献BAK core dimers bind lipids and can be bridged by them.
Nat.Struct.Mol.Biol., 27, 2020
6YQG
DownloadVisualize
BU of 6yqg by Molmil
Crystal structure of native Phycocyanin in spacegroup P63 at 1.45 Angstroms.
分子名称: C-phycocyanin alpha chain, C-phycocyanin beta chain, PHYCOCYANOBILIN, ...
著者Feiler, C.G, Falke, S, Sarrou, I.
登録日2020-04-17
公開日2021-01-20
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.45 Å)
主引用文献C-phycocyanin as a highly attractive model system in protein crystallography: unique crystallization properties and packing-diversity screening.
Acta Crystallogr D Struct Biol, 77, 2021
4QL0
DownloadVisualize
BU of 4ql0 by Molmil
Crystal Structure Analysis of the Membrane Transporter FhaC (double mutant V169T, I176N)
分子名称: DI(HYDROXYETHYL)ETHER, Filamentous hemagglutinin transporter protein FhaC, HEXAETHYLENE GLYCOL, ...
著者Maier, T, Clantin, B, Gruss, F, Dewitte, F, Delattre, A.S, Jacob-Dubuisson, F, Hiller, S, Villeret, V.
登録日2014-06-10
公開日2015-06-17
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Conserved Omp85 lid-lock structure and substrate recognition in FhaC
Nat Commun, 6, 2015
5JMR
DownloadVisualize
BU of 5jmr by Molmil
X-ray structure of the furin inhibitory antibody Nb14
分子名称: CHLORIDE ION, camelid VHH fragment
著者Dahms, S.O, Than, M.E.
登録日2016-04-29
公開日2016-12-07
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.27 Å)
主引用文献The structure of a furin-antibody complex explains non-competitive inhibition by steric exclusion of substrate conformers.
Sci Rep, 6, 2016
6V1Y
DownloadVisualize
BU of 6v1y by Molmil
Cryo-EM Structure of the Hyperpolarization-Activated Potassium Channel KAT1: Octamer
分子名称: (2S)-1-(nonanoyloxy)-3-(phosphonooxy)propan-2-yl tetradecanoate, (3beta,5beta,14beta,17alpha)-cholestan-3-ol, Potassium channel KAT1
著者Clark, M.D, Contreras, G.F, Shen, R, Perozo, E.
登録日2019-11-21
公開日2020-06-03
最終更新日2024-03-06
実験手法ELECTRON MICROSCOPY (3.8 Å)
主引用文献Electromechanical coupling in the hyperpolarization-activated K + channel KAT1.
Nature, 583, 2020
6YR4
DownloadVisualize
BU of 6yr4 by Molmil
Dye-type peroxidase DtpB in the ferryl state: Spectroscopically Validated composite structure
分子名称: MAGNESIUM ION, OXYGEN ATOM, PROTOPORPHYRIN IX CONTAINING FE, ...
著者Lucic, M, Dworkowski, F.S.N, Worrall, J.A.R, Hough, M.A.
登録日2020-04-19
公開日2021-01-13
最終更新日2024-05-01
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Serial Femtosecond Zero Dose Crystallography Captures a Water-Free Distal Heme Site in a Dye-Decolorising Peroxidase to Reveal a Catalytic Role for an Arginine in Fe IV =O Formation.
Angew.Chem.Int.Ed.Engl., 59, 2020
5QCD
DownloadVisualize
BU of 5qcd by Molmil
Crystal structure of human Cathepsin-S with bound ligand
分子名称: Cathepsin S, SULFATE ION, {(3S)-7-[(2-chloro-5-{5-(methylsulfonyl)-1-[3-(morpholin-4-yl)propyl]-4,5,6,7-tetrahydro-1H-pyrazolo[4,3-c]pyridin-3-yl}phenyl)ethynyl]-1,2,3,4-tetrahydroisoquinolin-3-yl}(piperidin-1-yl)methanone
著者Bembenek, S.D, Ameriks, M.K, Mirzadegan, T, Yang, H, Shao, C, Burley, S.K.
登録日2017-08-04
公開日2017-12-20
最終更新日2021-11-17
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Crystal structure of human Cathepsin-S with bound ligand
To be published
6VAJ
DownloadVisualize
BU of 6vaj by Molmil
Crystal Structure Analysis of human PIN1
分子名称: 2-chloro-N-(2,2-dimethylpropyl)-N-[(3R)-1,1-dioxo-1lambda~6~-thiolan-3-yl]acetamide, Peptidyl-prolyl cis-trans isomerase NIMA-interacting 1, SULFATE ION, ...
著者Seo, H.-S, Dhe-Paganon, S.
登録日2019-12-17
公開日2020-12-30
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.42 Å)
主引用文献Sulfopin is a covalent inhibitor of Pin1 that blocks Myc-driven tumors in vivo.
Nat.Chem.Biol., 17, 2021
5J8N
DownloadVisualize
BU of 5j8n by Molmil
Exonuclease III homologue Mm3148 from Methanosarcina mazei
分子名称: Exodeoxyribonuclease III, MAGNESIUM ION, TETRAETHYLENE GLYCOL
著者Lakomek, K, Dickmanns, A, Ficner, R.
登録日2016-04-08
公開日2016-04-27
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.44 Å)
主引用文献Structure of the archael ExoIII homologue Mm3148 at 1.4 Angstrom
To Be Published
6YE7
DownloadVisualize
BU of 6ye7 by Molmil
E.coli's Putrescine receptor PotF complexed with Cadaverine
分子名称: 1,2-ETHANEDIOL, 3,6,9,12,15,18-HEXAOXAICOSANE-1,20-DIOL, CHLORIDE ION, ...
著者Shanmugaratnam, S, Kroeger, P, Hocker, B.
登録日2020-03-24
公開日2021-01-20
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献A comprehensive binding study illustrates ligand recognition in the periplasmic binding protein PotF.
Structure, 29, 2021
4QDF
DownloadVisualize
BU of 4qdf by Molmil
Crystal structure of apo KshA5 and KshA1 in complex with 1,4-30Q-CoA from R. rhodochrous
分子名称: 3-ketosteroid 9alpha-hydroxylase oxygenase, FE (II) ION, FE2/S2 (INORGANIC) CLUSTER, ...
著者Penfield, J, Worrall, L.J, Strynadka, N.C, Eltis, L.D.
登録日2014-05-13
公開日2014-07-30
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.43 Å)
主引用文献Substrate specificities and conformational flexibility of 3-ketosteroid 9 alpha-hydroxylases.
J.Biol.Chem., 289, 2014
5J56
DownloadVisualize
BU of 5j56 by Molmil
RTA-V1C7
分子名称: 1,2-ETHANEDIOL, ACETIC ACID, CHLORIDE ION, ...
著者Rudolph, M.J.
登録日2016-04-01
公開日2016-12-07
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Structural Analysis of Single Domain Antibodies Bound to a Second Neutralizing Hot Spot on Ricin Toxin's Enzymatic Subunit.
J. Biol. Chem., 292, 2017

222624

件を2024-07-17に公開中

PDB statisticsPDBj update infoContact PDBjnumon