Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

1VAU
DownloadVisualize
BU of 1vau by Molmil
Xenon derivative of hen egg-white lysozyme
分子名称: CHLORIDE ION, Lysozyme C, SODIUM ION, ...
著者Takeda, K, Miyatake, H, Park, S.Y, Kawamoto, M, Kamiya, N, Miki, K, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2004-02-19
公開日2005-03-08
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Multi-wavelength anomalous diffraction method for I and Xe atoms using ultra-high-energy X-rays from SPring-8
J.Appl.Crystallogr., 37, 2004
4G1K
DownloadVisualize
BU of 4g1k by Molmil
Crystal structure of triosephosphate isomerase from Burkholderia thailandensis
分子名称: 1,2-ETHANEDIOL, ACETATE ION, SODIUM ION, ...
著者Seattle Structural Genomics Center for Infectious Disease, Seattle Structural Genomics Center for Infectious Disease (SSGCID)
登録日2012-07-10
公開日2012-07-25
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.35 Å)
主引用文献Combining functional and structural genomics to sample the essential Burkholderia structome.
Plos One, 8, 2013
4KV3
DownloadVisualize
BU of 4kv3 by Molmil
Ubiquitin-like domain of the Mycobacterium tuberculosis type VII secretion system protein EccD1 as maltose-binding protein fusion
分子名称: Chimera fusion protein of ESX-1 secretion system protein eccD1 and Maltose-binding periplasmic protein, alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose
著者Korotkov, K.V, Evans, T.J.
登録日2013-05-22
公開日2014-04-09
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Structures of EccB1 and EccD1 from the core complex of the mycobacterial ESX-1 type VII secretion system.
Bmc Struct.Biol., 16, 2016
2K0U
DownloadVisualize
BU of 2k0u by Molmil
High Resolution Solution NMR Structures of Oxaliplatin-DNA Adduct
分子名称: CYCLOHEXANE-1(R),2(R)-DIAMINE-PLATINUM(II), DNA (5'-D(*DCP*DCP*DTP*DCP*DTP*DGP*DGP*DTP*DCP*DTP*DCP*DC)-3'), DNA (5'-D(*DGP*DGP*DAP*DGP*DAP*DCP*DCP*DAP*DGP*DAP*DGP*DG)-3')
著者Bhattacharyya, D, King, C.L, Chaney, S.G, Campbell, S.L.
登録日2008-02-15
公開日2009-02-03
最終更新日2024-05-01
実験手法SOLUTION NMR
主引用文献Flanking Bases Influence the Nature of DNA Distortion by Platinum 1,2-Intrastrand (GG) Cross-Links.
Plos One, 6, 2011
4PH4
DownloadVisualize
BU of 4ph4 by Molmil
The crystal structure of Human VPS34 in complex with PIK-III
分子名称: 4'-(cyclopropylmethyl)-N~2~-(pyridin-4-yl)-4,5'-bipyrimidine-2,2'-diamine, GLYCEROL, Phosphatidylinositol 3-kinase catalytic subunit type 3
著者Knapp, M.S, Elling, R.A.
登録日2014-05-04
公開日2014-10-29
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Selective VPS34 inhibitor blocks autophagy and uncovers a role for NCOA4 in ferritin degradation and iron homeostasis in vivo.
Nat.Cell Biol., 16, 2014
4MB3
DownloadVisualize
BU of 4mb3 by Molmil
Crystal structure of E153Q mutant of cold-adapted chitinase from Moritella marina
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, CHLORIDE ION, Chitinase 60, ...
著者Malecki, P.H, Vorgias, C.E, Rypniewski, W.
登録日2013-08-19
公開日2014-03-19
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.55 Å)
主引用文献Crystal structures of substrate-bound chitinase from the psychrophilic bacterium Moritella marina and its structure in solution
Acta Crystallogr.,Sect.D, 70, 2014
8BZU
DownloadVisualize
BU of 8bzu by Molmil
Double-ion dependent DNA quadruplex structure formed by C.elegans telomeric sequence
分子名称: DNA (5'-D(*GP*GP*CP*TP*TP*AP*GP*GP*CP*TP*TP*AP*GP*GP*CP*TP*TP*AP*GP*GP*C)-3')
著者Lenarcic Zivkovic, M, Trantirek, L.
登録日2022-12-15
公開日2024-03-13
実験手法SOLUTION NMR
主引用文献DNA Quadruplex Structure with a Unique Cation Dependency.
Angew.Chem.Int.Ed.Engl., 63, 2024
4PDE
DownloadVisualize
BU of 4pde by Molmil
Crystal structure of FdhD in complex with GDP
分子名称: GUANOSINE-5'-DIPHOSPHATE, Protein FdhD
著者Arnoux, P, Walburger, A, Magalon, A, Pignol, D.
登録日2014-04-18
公開日2015-05-20
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Sulphur shuttling across a chaperone during molybdenum cofactor maturation.
Nat Commun, 6, 2015
4P5N
DownloadVisualize
BU of 4p5n by Molmil
Structure of CNAG_02591 from Cryptococcus neoformans
分子名称: CADMIUM ION, GLYCEROL, Hypothetical protein CNAG_02591, ...
著者Ramagopal, U.A, McClelland, E.E, Toro, R, Casadevall, A, Almo, S.C, New York Structural Genomics Research Consortium (NYSGRC)
登録日2014-03-18
公開日2014-05-28
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (1.49 Å)
主引用文献A Small Protein Associated with Fungal Energy Metabolism Affects the Virulence of Cryptococcus neoformans in Mammals.
Plos Pathog., 12, 2016
4PNW
DownloadVisualize
BU of 4pnw by Molmil
E. coli sliding clamp in complex with (R)-6-bromo-9-(2-((S)-1-carboxy-2-phenylethylamino)-2-oxoethyl)-2,3,4,9-tetrahydro-1H-carbazole-2-carboxylic acid
分子名称: (2R)-6-bromo-9-(2-{[(1S)-1-carboxy-2-phenylethyl]amino}-2-oxoethyl)-2,3,4,9-tetrahydro-1H-carbazole-2-carboxylic acid, CALCIUM ION, CHLORIDE ION, ...
著者Yin, Z, Oakley, A.J.
登録日2014-02-21
公開日2014-03-05
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Bacterial Sliding Clamp Inhibitors that Mimic the Sequential Binding Mechanism of Endogenous Linear Motifs.
J.Med.Chem., 58, 2015
4PLU
DownloadVisualize
BU of 4plu by Molmil
Crystal structure of Macrophage Migration Inhibitory Factor in complex with benzaldehyde
分子名称: ISOPROPYL ALCOHOL, Macrophage migration inhibitory factor, SULFATE ION, ...
著者Pantouris, G, Lolis, E.
登録日2014-05-19
公開日2015-09-30
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (1.63 Å)
主引用文献An Analysis of MIF Structural Features that Control Functional Activation of CD74.
Chem.Biol., 22, 2015
4PNV
DownloadVisualize
BU of 4pnv by Molmil
E. coli sliding clamp apo-crystal in P21 space group with larger cell dimensions
分子名称: CALCIUM ION, CHLORIDE ION, DI(HYDROXYETHYL)ETHER, ...
著者Yin, Z, Oakley, A.J.
登録日2014-02-21
公開日2014-03-05
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.86 Å)
主引用文献Bacterial Sliding Clamp Inhibitors that Mimic the Sequential Binding Mechanism of Endogenous Linear Motifs.
J.Med.Chem., 58, 2015
4PKZ
DownloadVisualize
BU of 4pkz by Molmil
Crystal structure of P1M mutant of Macrophage Migration Inhibitory Factor
分子名称: ISOPROPYL ALCOHOL, Macrophage migration inhibitory factor, SULFATE ION
著者Pantouris, G, Lolis, E.
登録日2014-05-15
公開日2015-09-30
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献An Analysis of MIF Structural Features that Control Functional Activation of CD74.
Chem.Biol., 22, 2015
4PNU
DownloadVisualize
BU of 4pnu by Molmil
E. coli sliding clamp in complex with (R)-6-bromo-9-(2-((R)-1-carboxy-2-phenylethylamino)-2-oxoethyl)-2,3,4,9-tetrahydro-1H-carbazole-2-carboxylic acid
分子名称: (2R)-6-bromo-9-(2-{[(1R)-1-carboxy-2-phenylethyl]amino}-2-oxoethyl)-2,3,4,9-tetrahydro-1H-carbazole-2-carboxylic acid, CALCIUM ION, CHLORIDE ION, ...
著者Yin, Z, Oakley, A.J.
登録日2014-02-21
公開日2014-03-05
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Bacterial Sliding Clamp Inhibitors that Mimic the Sequential Binding Mechanism of Endogenous Linear Motifs.
J.Med.Chem., 58, 2015
4PQH
DownloadVisualize
BU of 4pqh by Molmil
Crystal structure of glutathione transferase lambda1 from Populus trichocarpa
分子名称: GLUTATHIONE, SODIUM ION, glutathione transferase lambda1
著者Lallement, P.A, Meux, E, Gualberto, J.M, Prosper, P, Didierjean, C, Haouz, A, Saul, F, Rouhier, N, Hecker, A.
登録日2014-03-03
公開日2014-06-25
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献Structural and enzymatic insights into Lambda glutathione transferases from Populus trichocarpa, monomeric enzymes constituting an early divergent class specific to terrestrial plants.
Biochem.J., 462, 2014
4PX2
DownloadVisualize
BU of 4px2 by Molmil
Human GKRP bound to AMG2882 and Sorbitol-6-Phosphate
分子名称: D-SORBITOL-6-PHOSPHATE, GLYCEROL, Glucokinase regulatory protein, ...
著者Jordan, S.R, Chmait, S.
登録日2014-03-21
公開日2015-05-13
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.15 Å)
主引用文献Discovery and Structure Guided Optimization of Diarylmethanesulfonamide Disruptors of GK-GKRP Binding
To be Published
4PXS
DownloadVisualize
BU of 4pxs by Molmil
Human GKRP bound to AMG-0265 (N-[(R)-(2-CHLOROPHENYL){7-[4-(2-HYDROXYPROPAN-2-YL) PYRIDIN-2-YL]-1-BENZOTHIOPHEN-2-YL}METHYL]CYCLOPROPANESULFONAMIDE) and Sorbitol-6-phosphate
分子名称: D-SORBITOL-6-PHOSPHATE, GLYCEROL, Glucokinase regulatory protein, ...
著者Jordan, S.R, Chmait, S.
登録日2014-03-24
公開日2015-03-18
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Discovery and Structure-Guided Optimization of Diarylmethanesulfonamide Disruptors of GK-GKRP Binding.
To be Published
2IJY
DownloadVisualize
BU of 2ijy by Molmil
NMR structure ensemble for the reduced DsbA disulphide oxidoreductase from Vibrio Cholerae
分子名称: Thiol:disulfide interchange protein dsbA
著者Horne, J.H, Velkov, T, Scanlon, M.J.
登録日2006-10-02
公開日2007-07-17
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献Probing the Flexibility of the DsbA Oxidoreductase from Vibrio cholerae-a (15)N - (1)H Heteronuclear NMR Relaxation Analysis of Oxidized and Reduced Forms of DsbA.
J.Mol.Biol., 371, 2007
2IPL
DownloadVisualize
BU of 2ipl by Molmil
Crystal structure of a disulfide mutant glucose binding protein
分子名称: CALCIUM ION, D-galactose-binding periplasmic protein, beta-D-glucopyranose
著者Cuneo, M.J, Hellinga, H.W.
登録日2006-10-12
公開日2007-03-20
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.2 Å)
主引用文献The free energy cost of domain reorganization in E. coli glucose binding protein
To be Published
2MRN
DownloadVisualize
BU of 2mrn by Molmil
Structure of truncated EcMazE
分子名称: Antitoxin MazE
著者Zorzini, V, Buts, L, Loris, R, van Nuland, N.A.J.
登録日2014-07-12
公開日2015-02-04
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Escherichia coli antitoxin MazE as transcription factor: insights into MazE-DNA binding.
Nucleic Acids Res., 43, 2015
4LGV
DownloadVisualize
BU of 4lgv by Molmil
X-ray crystal structure of Glucose-6-phosphate 1-dehydrogenase from Mycobacterium avium
分子名称: 1,2-ETHANEDIOL, CHLORIDE ION, GLYCEROL, ...
著者Seattle Structural Genomics Center for Infectious Disease (SSGCID)
登録日2013-06-28
公開日2013-07-24
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Increasing the structural coverage of tuberculosis drug targets.
Tuberculosis (Edinb), 95, 2015
7BGH
DownloadVisualize
BU of 7bgh by Molmil
Solution structure of the chloroplast outer envelope channel OEP21
分子名称: Outer envelope pore protein 21, chloroplastic
著者Hagn, F, Haeusler, E.
登録日2021-01-07
公開日2022-01-19
最終更新日2024-06-19
実験手法SOLUTION NMR
主引用文献Structural basis of metabolite transport by the chloroplast outer envelope channel OEP21.
Nat.Struct.Mol.Biol., 2023
2JX2
DownloadVisualize
BU of 2jx2 by Molmil
Solution conformation of RNA-bound NELF-E RRM
分子名称: Negative elongation factor E
著者Jampani, N, Schweimer, K, Wenzel, S, Woehrl, B.M, Roesch, P.
登録日2007-11-02
公開日2008-04-08
最終更新日2024-05-08
実験手法SOLUTION NMR
主引用文献NELF-E RRM Undergoes Major Structural Changes in Flexible Protein Regions on Target RNA Binding
Biochemistry, 47, 2008
2K7Q
DownloadVisualize
BU of 2k7q by Molmil
Filamin A Ig-like domains 18-19
分子名称: Filamin-A
著者Heikkinen, O.K, Kilpelainen, I, Koskela, H, Permi, P, Heikkinen, S, Ylanne, J.
登録日2008-08-19
公開日2009-07-07
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献Atomic structures of two novel immunoglobulin-like domain pairs in the actin cross-linking protein filamin
J.Biol.Chem., 284, 2009
7ALU
DownloadVisualize
BU of 7alu by Molmil
NMR structure of a DNA G-quadruplex containing two SP1 binding sites from HIV-1 promoter
分子名称: DNA (5'-D(*AP*GP*GP*GP*AP*GP*GP*TP*GP*TP*GP*GP*CP*CP*TP*GP*GP*GP*CP*GP*GP*G)-3'), POTASSIUM ION
著者De Rache, A, Marquevielle, J, Amrane, S.
登録日2020-10-07
公開日2022-06-01
最終更新日2023-12-13
実験手法SOLUTION NMR
主引用文献Structure of a DNA G-quadruplex that modulates SP1 binding sites architecture in HIV-1 promoter.
J.Mol.Biol., 2023

222624

件を2024-07-17に公開中

PDB statisticsPDBj update infoContact PDBjnumon