PDB: 41454 件ウェブページステータス検索Chemie searchBIRD

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6LOG	Crystal structure of human CCL5-12AAA14 mutant 分子名称: C-C motif chemokine 5 著者 Chen, Y.C, Li, J.Y, Huang, C.H, Sue, S.C. 登録日 2020-01-05 公開日 2020-03-18 最終更新日 2023-11-29 実験手法 X-RAY DIFFRACTION (2.55 Å) 主引用文献 N-terminal Backbone Pairing Shifts in CCL5- 12 AAA 14 Dimer Interface: Structural Significance of the FAY Sequence. Int J Mol Sci, 21, 2020
6EXT	Crystal structure of the DNA binding domain of fission yeast Sap1 分子名称: Switch-activating protein 1 著者 Ekundayo, B, Joergensen, M, Schalch, T. 登録日 2017-11-09 公開日 2018-11-28 最終更新日 2024-01-17 実験手法 X-RAY DIFFRACTION (1.5 Å) 主引用文献 Structure of the replication regulator Sap1 reveals functionally important interfaces. Sci Rep, 8, 2018
7ALN	Cryo-EM structure of the divergent actomyosin complex from Plasmodium falciparum Myosin A in the Rigor state 分子名称: ADENOSINE-5'-DIPHOSPHATE, Actin-1, Jasplakinolide, ... 著者 Robert-Paganin, J, Xu, X.-P, Swift, M.F, Auguin, D, Robblee, J.P, Lu, H, Fagnant, P.M, Krementsova, E.B, Trybus, K.M, Houdusse, A, Volkmann, N, Hanein, D. 登録日 2020-10-06 公開日 2021-04-28 実験手法 ELECTRON MICROSCOPY (3.77 Å) 主引用文献 The actomyosin interface contains an evolutionary conserved core and an ancillary interface involved in specificity. Nat Commun, 12, 2021
6EXU	Crystal structure of the DNA binding domain of fission yeast Sap1 分子名称: Switch-activating protein 1 著者 Ekundayo, B, Joergensen, M, Schalch, T. 登録日 2017-11-09 公開日 2018-11-28 実験手法 X-RAY DIFFRACTION (1.409 Å) 主引用文献 Structure of the replication regulator Sap1 reveals functionally important interfaces. Sci Rep, 8, 2018
7QG9	Tail tip of siphophage T5 : common core proteins 分子名称: Distal tail protein, L-shaped tail fiber protein p132, Minor tail protein, ... 著者 Linares, R, Arnaud, C.A, Effantin, G, Darnault, C, Epalle, N, Boeri Erba, E, Schoehn, G, Breyton, C. 登録日 2021-12-07 公開日 2022-12-21 最終更新日 2023-07-05 実験手法 ELECTRON MICROSCOPY (3.45 Å) 主引用文献 Structural basis of bacteriophage T5 infection trigger and E. coli cell wall perforation. Sci Adv, 9, 2023
3GVM	Structure of the homodimeric WXG-100 family protein from Streptococcus agalactiae 分子名称: Putative uncharacterized protein SAG1039 著者 Poulsen, C, Gries, F, Wilmanns, M, Song, Y.H. 登録日 2009-03-31 公開日 2010-09-08 最終更新日 2024-03-20 実験手法 X-RAY DIFFRACTION (2.15 Å) 主引用文献 WXG100 protein superfamily consists of three subfamilies and exhibits an alpha-helical C-terminal conserved residue pattern. Plos One, 9, 2014
4FP4	Crystal structure of isoprenoid synthase a3mx09 (target efi-501993) from pyrobaculum calidifontis 分子名称: GERAN-8-YL GERAN, Polyprenyl synthetase, UNKNOWN ATOM OR ION, ... 著者 Patskovsky, Y, Toro, R, Bhosle, R, Hillerich, B, Seidel, R.D, Washington, E, Scott Glenn, A, Chowdhury, S, Evans, B, Hammonds, J, Zencheck, W.D, Imker, H.J, Poulter, C.D, Gerlt, J.A, Almo, S.C, Enzyme Function Initiative (EFI) 登録日 2012-06-21 公開日 2012-07-11 最終更新日 2023-09-13 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Prediction of function for the polyprenyl transferase subgroup in the isoprenoid synthase superfamily. Proc.Natl.Acad.Sci.USA, 110, 2013
4F62	Crystal structure of a putative farnesyl-diphosphate synthase from Marinomonas sp. MED121 (Target EFI-501980) 分子名称: CHLORIDE ION, GLYCEROL, Geranyltranstransferase, ... 著者 Vetting, M.W, Toro, R, Bhosle, R, Al Obaidi, N.F, Washington, E, Scott Glenn, A, Chowdhury, S, Evans, B, Hammonds, J, Hillerich, B, Love, J, Seidel, R.D, Imker, H.J, Poulter, C.D, Gerlt, J.A, Almo, S.C, Enzyme Function Initiative (EFI) 登録日 2012-05-14 公開日 2012-06-13 最終更新日 2023-09-13 実験手法 X-RAY DIFFRACTION (2.101 Å) 主引用文献 Prediction of function for the polyprenyl transferase subgroup in the isoprenoid synthase superfamily. Proc.Natl.Acad.Sci.USA, 110, 2013
1VHP	VH-P8, NMR 分子名称: VH-P8 著者 Riechmann, L. 登録日 1996-04-16 公開日 1996-11-08 最終更新日 2022-03-02 実験手法 SOLUTION NMR 主引用文献 Rearrangement of the former VL interface in the solution structure of a camelised, single antibody VH domain. J.Mol.Biol., 259, 1996
5VSI	CH1/Ckappa Fab mutant 15.1 分子名称: 1,2-ETHANEDIOL, CH1/Ckappa Fab heavy chain, CH1/Ckappa Fab light chain, ... 著者 Hendle, J. 登録日 2017-05-11 公開日 2017-08-02 最終更新日 2023-10-04 実験手法 X-RAY DIFFRACTION (1.51 Å) 主引用文献 Computational design of a specific heavy chain/ kappa light chain interface for expressing fully IgG bispecific antibodies. Protein Sci., 26, 2017
7RTY	Crystal Structure of PsfC from Pseudomonas syringae PB-5123 分子名称: FE (II) ION, PsfC 著者 Ongpipattanakul, C, Nair, S.K. 登録日 2021-08-16 公開日 2021-09-15 最終更新日 2024-05-22 実験手法 X-RAY DIFFRACTION (1.963 Å) 主引用文献 Biosynthesis of fosfomycin in pseudomonads reveals an unexpected enzymatic activity in the metallohydrolase superfamily. Proc.Natl.Acad.Sci.USA, 118, 2021
3HK5	Crystal structure of uronate isomerase from Bacillus halodurans complexed with zinc and D-Arabinarate 分子名称: CARBONATE ION, CHLORIDE ION, D-arabinaric acid, ... 著者 Fedorov, A.A, Fedorov, E.V, Nguyen, T.T, Raushel, F.M, Almo, S.C. 登録日 2009-05-22 公開日 2009-08-25 最終更新日 2023-09-06 実験手法 X-RAY DIFFRACTION (2.2 Å) 主引用文献 The mechanism of the reaction catalyzed by uronate isomerase illustrates how an isomerase may have evolved from a hydrolase within the amidohydrolase superfamily. Biochemistry, 48, 2009
3HK8	Crystal structure of uronate isomerase from Bacillus halodurans complexed with zinc and D-Arabinohydroxamate 分子名称: CARBONATE ION, CHLORIDE ION, D-arabinohydroxamic acid, ... 著者 Fedorov, A.A, Fedorov, E.V, Nguyen, T.T, Raushel, F.M, Almo, S.C. 登録日 2009-05-22 公開日 2009-08-25 最終更新日 2023-09-06 実験手法 X-RAY DIFFRACTION (2.2 Å) 主引用文献 The mechanism of the reaction catalyzed by uronate isomerase illustrates how an isomerase may have evolved from a hydrolase within the amidohydrolase superfamily. Biochemistry, 48, 2009
3HKA	Crystal structure of uronate isomerase from Bacillus halodurans complexed with zinc and D-Fructuronate 分子名称: CARBONATE ION, CHLORIDE ION, D-fructuronic acid, ... 著者 Fedorov, A.A, Fedorov, E.V, Nguyen, T.T, Raushel, F.M, Almo, S.C. 登録日 2009-05-22 公開日 2009-08-25 最終更新日 2023-09-06 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 The mechanism of the reaction catalyzed by uronate isomerase illustrates how an isomerase may have evolved from a hydrolase within the amidohydrolase superfamily. Biochemistry, 48, 2009
6O47	human cGAS core domain (K427E/K428E) bound with RU-521 分子名称: (3~{S})-3-[1-[4,5-bis(chloranyl)-1~{H}-benzimidazol-2-yl]-3-methyl-5-oxidanyl-pyrazol-4-yl]-3~{H}-2-benzofuran-1-one, 2-(4,5-dichloro-1H-benzimidazol-2-yl)-5-methyl-4-[(1R)-3-oxo-1,3-dihydro-2-benzofuran-1-yl]-1,2-dihydro-3H-pyrazol-3-one, CITRIC ACID, ... 著者 Xie, W, Lama, L, Adura, C, Glickman, J.F, Tuschl, T, Patel, D.J. 登録日 2019-02-28 公開日 2019-05-29 最終更新日 2023-10-11 実験手法 X-RAY DIFFRACTION (2.196 Å) 主引用文献 Human cGAS catalytic domain has an additional DNA-binding interface that enhances enzymatic activity and liquid-phase condensation. Proc.Natl.Acad.Sci.USA, 116, 2019
3WOH	Structure of Ketoreductase SiaM from Streptomyces sp. A7248 分子名称: SiaM 著者 Wang, H, Zhang, H. 登録日 2013-12-29 公開日 2014-08-06 最終更新日 2023-11-08 実験手法 X-RAY DIFFRACTION (2.5 Å) 主引用文献 Structural insight into the tetramerization of an iterative ketoreductase siam through aromatic residues in the interfaces Plos One, 9, 2014
5FNZ	F206W mutant of FAD synthetase from Corynebacterium ammoniagenes 分子名称: PYROPHOSPHATE, RIBOFLAVIN BIOSYNTHESIS PROTEIN RIBF, SULFATE ION 著者 Martinez-Julvez, M, Herguedas, B, Milagros, M. 登録日 2015-11-17 公開日 2016-11-30 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (2.52 Å) 主引用文献 The trimer interface in the quaternary structure of the bifunctional prokaryotic FAD synthetase from Corynebacterium ammoniagenes. Sci Rep, 7, 2017
5FO1	E301A mutant of FAD synthetase from Corynebacterium ammoniagenes 分子名称: PYROPHOSPHATE, RIBOFLAVIN BIOSYNTHESIS PROTEIN RIBF, SULFATE ION 著者 Martinez-Julvez, M, Herguedas, B, Milagros, M. 登録日 2015-11-17 公開日 2016-11-30 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (2.45 Å) 主引用文献 The trimer interface in the quaternary structure of the bifunctional prokaryotic FAD synthetase from Corynebacterium ammoniagenes. Sci Rep, 7, 2017
5FO0	D298E mutant of FAD synthetase from Corynebacterium ammoniagenes 分子名称: PYROPHOSPHATE, RIBOFLAVIN BIOSYNTHESIS PROTEIN RIBF, SULFATE ION 著者 Martinez-Julvez, M, Herguedas, B, Milagros, M. 登録日 2015-11-17 公開日 2016-11-30 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (2.51 Å) 主引用文献 The trimer interface in the quaternary structure of the bifunctional prokaryotic FAD synthetase from Corynebacterium ammoniagenes. Sci Rep, 7, 2017
1RDF	G50P mutant of phosphonoacetaldehyde hydrolase in complex with substrate analogue vinyl sulfonate 分子名称: ETHANESULFONIC ACID, MAGNESIUM ION, phosphonoacetaldehyde hydrolase 著者 Lahiri, S.D, Zhang, G, Dunaway-Mariano, D, Allen, K.N. 登録日 2003-11-05 公開日 2004-08-31 最終更新日 2023-08-23 実験手法 X-RAY DIFFRACTION (2.8 Å) 主引用文献 Analysis of the substrate specificity loop of the HAD superfamily cap domain Biochemistry, 43, 2004
5DC0	CRYSTAL STRUCTURE OF MONOBODY GG3/ABL1 SH2 DOMAIN COMPLEX 分子名称: Fibronectin, Tyrosine-protein kinase ABL1 著者 Wojcik, J.B, Grabe, G, Koide, S. 登録日 2015-08-22 公開日 2016-03-02 最終更新日 2024-03-06 実験手法 X-RAY DIFFRACTION (2.23 Å) 主引用文献 Allosteric Inhibition of Bcr-Abl Kinase by High Affinity Monobody Inhibitors Directed to the Src Homology 2 (SH2)-Kinase Interface. J.Biol.Chem., 291, 2016
5DC9	CRYSTAL STRUCTURE OF MONOBODY AS25/ABL1 SH2 DOMAIN COMPLEX, CRYSTAL B 分子名称: AS25 monobody, GLYCEROL, IMIDAZOLE, ... 著者 Wojcik, J.B, Koide, A, Koide, S. 登録日 2015-08-23 公開日 2016-03-02 最終更新日 2024-03-06 実験手法 X-RAY DIFFRACTION (1.56 Å) 主引用文献 Allosteric Inhibition of Bcr-Abl Kinase by High Affinity Monobody Inhibitors Directed to the Src Homology 2 (SH2)-Kinase Interface. J.Biol.Chem., 291, 2016
4X0R	Crystal structure of human MxB stalk domain 分子名称: Interferon-induced GTP-binding protein Mx2 著者 Yu, X.-F, Xie, W. 登録日 2014-11-23 公開日 2014-12-10 最終更新日 2023-11-08 実験手法 X-RAY DIFFRACTION (2.905 Å) 主引用文献 Structural insight into the assembly of human anti-HIV dynamin-like protein MxB/Mx2. Biochem.Biophys.Res.Commun., 456, 2015
6VIE	Structure of caspase-1 in complex with gasdermin D 分子名称: Caspase-1 subunit p10, Caspase-1 subunit p20, Gasdermin-D 著者 Liu, Z, Xiao, T.S. 登録日 2020-01-13 公開日 2020-07-01 最終更新日 2023-10-11 実験手法 X-RAY DIFFRACTION (3.4 Å) 主引用文献 Caspase-1 Engages Full-Length Gasdermin D through Two Distinct Interfaces That Mediate Caspase Recruitment and Substrate Cleavage. Immunity, 53, 2020
5KF6	Structure of proline utilization A from Sinorhizobium meliloti complexed with L-tetrahydrofuroic acid and NAD+ in space group P21 分子名称: Bifunctional protein PutA, FLAVIN-ADENINE DINUCLEOTIDE, MAGNESIUM ION, ... 著者 Tanner, J.J. 登録日 2016-06-12 公開日 2016-10-05 最終更新日 2023-09-27 実験手法 X-RAY DIFFRACTION (1.7 Å) 主引用文献 Structures of Proline Utilization A (PutA) Reveal the Fold and Functions of the Aldehyde Dehydrogenase Superfamily Domain of Unknown Function. J.Biol.Chem., 291, 2016

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