PDB: 46984 件ウェブページステータス検索Chemie searchBIRD

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7QV9	CryoEM structure of bacterial transcription intermediate complex mediated by activator PspF 分子名称: ADENOSINE-5'-DIPHOSPHATE, ALUMINUM FLUORIDE, DNA-directed RNA polymerase subunit alpha, ... 著者 Ye, F.Z, Zhang, X.D. 登録日 2022-01-20 公開日 2022-11-09 最終更新日 2024-07-17 実験手法 ELECTRON MICROSCOPY (3.5 Å) 主引用文献 Mechanisms of DNA opening revealed in AAA+ transcription complex structures. Sci Adv, 8, 2022
7QWP	CryoEM structure of bacterial transcription close complex (RPc) 分子名称: DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit beta, DNA-directed RNA polymerase subunit beta', ... 著者 Ye, F.Z, Zhang, X.D. 登録日 2022-01-25 公開日 2022-11-09 最終更新日 2024-07-17 実験手法 ELECTRON MICROSCOPY (3.4 Å) 主引用文献 Mechanisms of DNA opening revealed in AAA+ transcription complex structures. Sci Adv, 8, 2022
7P48	Staphylococcus aureus ribosome in complex with Sal(B) 分子名称: 16S rRNA, 23S rRNA, 30S ribosomal protein S10, ... 著者 Nicholson, D, Ranson, N.A, O'Neill, A.J. 登録日 2021-07-09 公開日 2022-02-02 最終更新日 2022-03-09 実験手法 ELECTRON MICROSCOPY (2.9 Å) 主引用文献 Sal-type ABC-F proteins: intrinsic and common mediators of pleuromutilin resistance by target protection in staphylococci. Nucleic Acids Res., 50, 2022
7P5Z	Structure of a DNA-loaded MCM double hexamer engaged with the Dbf4-dependent kinase 分子名称: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, Cell division control protein 7, ... 著者 Greiwe, J.F, Miller, T.C.R, Martino, F, Costa, A. 登録日 2021-07-15 公開日 2022-02-02 最終更新日 2024-07-17 実験手法 ELECTRON MICROSCOPY (3.3 Å) 主引用文献 Structural mechanism for the selective phosphorylation of DNA-loaded MCM double hexamers by the Dbf4-dependent kinase. Nat.Struct.Mol.Biol., 29, 2022
7P30	3.0 A resolution structure of a DNA-loaded MCM double hexamer 分子名称: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, DNA (53-MER), ... 著者 Greiwe, J.F, Miller, T.C.R, Martino, F, Costa, A. 登録日 2021-07-06 公開日 2022-02-02 最終更新日 2024-07-17 実験手法 ELECTRON MICROSCOPY (3 Å) 主引用文献 Structural mechanism for the selective phosphorylation of DNA-loaded MCM double hexamers by the Dbf4-dependent kinase. Nat.Struct.Mol.Biol., 29, 2022
7P7U	E. faecalis 70S ribosome with P-tRNA, state IV 分子名称: 1,4-DIAMINOBUTANE, 16S rRNA, 23S rRNA, ... 著者 Crowe-McAuliffe, C, Wilson, D.N. 登録日 2021-07-20 公開日 2022-02-23 最終更新日 2024-07-17 実験手法 ELECTRON MICROSCOPY (3.1 Å) 主引用文献 Structural basis for PoxtA-mediated resistance to phenicol and oxazolidinone antibiotics. Nat Commun, 13, 2022
7P7R	PoxtA-EQ2 antibiotic resistance ABCF bound to E. faecalis 70S ribosome, state I 分子名称: 1,4-DIAMINOBUTANE, 16S rRNA, 23S rRNA, ... 著者 Crowe-McAuliffe, C, Wilson, D.N. 登録日 2021-07-20 公開日 2022-03-23 最終更新日 2024-07-17 実験手法 ELECTRON MICROSCOPY (2.9 Å) 主引用文献 Structural basis for PoxtA-mediated resistance to phenicol and oxazolidinone antibiotics. Nat Commun, 13, 2022
7PAK	70S ribosome with EF-Tu-tRNA and P-site tRNA in Mycoplasma pneumoniae cells 分子名称: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S10, ... 著者 Xue, L, Lenz, S, Rappsilber, J, Mahamid, J. 登録日 2021-07-30 公開日 2022-05-25 最終更新日 2022-10-19 実験手法 ELECTRON MICROSCOPY (5.3 Å) 主引用文献 Visualizing translation dynamics at atomic detail inside a bacterial cell. Nature, 610, 2022
7PAR	70S ribosome with EF-G, ap/P- and pe/E-site tRNAs in Mycoplasma pneumoniae cells 分子名称: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S10, ... 著者 Xue, L, Lenz, S, Rappsilber, J, Mahamid, J. 登録日 2021-07-30 公開日 2022-05-25 最終更新日 2022-10-19 実験手法 ELECTRON MICROSCOPY (8.2 Å) 主引用文献 Visualizing translation dynamics at atomic detail inside a bacterial cell. Nature, 610, 2022
7PAJ	70S ribosome with EF-Tu-tRNA, P- and E-site tRNAs in Mycoplasma pneumoniae cells 分子名称: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S10, ... 著者 Xue, L, Lenz, S, Rappsilber, J, Mahamid, J. 登録日 2021-07-30 公開日 2022-05-25 最終更新日 2022-10-19 実験手法 ELECTRON MICROSCOPY (7.3 Å) 主引用文献 Visualizing translation dynamics at atomic detail inside a bacterial cell. Nature, 610, 2022
7P6Z	Mycoplasma pneumoniae 70S ribosome in untreated cells 分子名称: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S10, ... 著者 Xue, L, Lenz, S, Rappsilber, J, Mahamid, J. 登録日 2021-07-18 公開日 2022-05-25 最終更新日 2022-10-19 実験手法 ELECTRON MICROSCOPY (3.5 Å) 主引用文献 Visualizing translation dynamics at atomic detail inside a bacterial cell. Nature, 610, 2022
7PAM	70S ribosome with A*- and P/E-site tRNAs in Mycoplasma pneumoniae cells 分子名称: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S10, ... 著者 Xue, L, Lenz, S, Rappsilber, J, Mahamid, J. 登録日 2021-07-30 公開日 2022-05-25 最終更新日 2022-10-19 実験手法 ELECTRON MICROSCOPY (6.8 Å) 主引用文献 Visualizing translation dynamics at atomic detail inside a bacterial cell. Nature, 610, 2022
7OOD	Mycoplasma pneumoniae 50S subunit of ribosomes in chloramphenicol-treated cells 分子名称: 23S ribosomal RNA, 50S ribosomal protein L10, 50S ribosomal protein L11, ... 著者 Xue, L, Lenz, S, Rappsilber, J, Mahamid, J. 登録日 2021-05-27 公開日 2022-05-25 最終更新日 2022-10-19 実験手法 ELECTRON MICROSCOPY (3.4 Å) 主引用文献 Visualizing translation dynamics at atomic detail inside a bacterial cell. Nature, 610, 2022
7PAL	70S ribosome with A- and P-site tRNAs in Mycoplasma pneumoniae cells 分子名称: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S10, ... 著者 Xue, L, Lenz, S, Rappsilber, J, Mahamid, J. 登録日 2021-07-30 公開日 2022-05-25 最終更新日 2023-07-26 実験手法 ELECTRON MICROSCOPY (4.7 Å) 主引用文献 Visualizing translation dynamics at atomic detail inside a bacterial cell. Nature, 610, 2022
6L8D	Hexameric structure of the ATPase subunit of magnesium chelatase 分子名称: Magnesium-chelatase subunit ChlI 著者 Gao, Y, Liu, L. 登録日 2019-11-05 公開日 2020-01-15 最終更新日 2023-11-22 実験手法 X-RAY DIFFRACTION (2.91 Å) 主引用文献 Hexameric structure of the ATPase motor subunit of magnesium chelatase in chlorophyll biosynthesis. Protein Sci., 29, 2020
7PAI	70S ribosome with P-site tRNA in Mycoplasma pneumoniae cells 分子名称: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S10, ... 著者 Xue, L, Lenz, S, Rappsilber, J, Mahamid, J. 登録日 2021-07-30 公開日 2022-05-25 最終更新日 2022-10-19 実験手法 ELECTRON MICROSCOPY (6.7 Å) 主引用文献 Visualizing translation dynamics at atomic detail inside a bacterial cell. Nature, 610, 2022
7PAO	70S ribosome with EF-G, A*- and P/E-site tRNAs in Mycoplasma pneumoniae cells 分子名称: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S10, ... 著者 Xue, L, Lenz, S, Rappsilber, J, Mahamid, J. 登録日 2021-07-30 公開日 2022-05-25 最終更新日 2022-10-19 実験手法 ELECTRON MICROSCOPY (7 Å) 主引用文献 Visualizing translation dynamics at atomic detail inside a bacterial cell. Nature, 610, 2022
7QTT	Structural organization of a late activated human spliceosome (Baqr, core region) 分子名称: 116 kDa U5 small nuclear ribonucleoprotein component, BUD13 homolog, Cell division cycle 5-like protein, ... 著者 Cretu, C, Pena, V. 登録日 2022-01-15 公開日 2023-05-10 最終更新日 2024-07-17 実験手法 ELECTRON MICROSCOPY (3.1 Å) 主引用文献 Structural basis of catalytic activation in human splicing. Nature, 617, 2023
5UQ8	70S ribosome complex with dnaX mRNA stem-loop and E-site tRNA ("out" conformation) 分子名称: 16S rRNA, 23S rRNA, 30S ribosomal protein S10, ... 著者 Zhang, Y, Hong, S, Skiniotis, G, Dunham, C.M. 登録日 2017-02-07 公開日 2018-03-07 最終更新日 2018-03-21 実験手法 ELECTRON MICROSCOPY (3.2 Å) 主引用文献 Alternative Mode of E-Site tRNA Binding in the Presence of a Downstream mRNA Stem Loop at the Entrance Channel. Structure, 26, 2018
7OWV	Crystal structure of IpgC in complex with a follow-up compound based on J20 分子名称: 3-(4-chlorophenyl)-5-methylsulfanyl-1~{H}-pyrazole-4-carbonitrile, CHLORIDE ION, Chaperone protein IpgC, ... 著者 Gardonyi, M, Heine, A, Klebe, G. 登録日 2021-06-19 公開日 2022-07-13 最終更新日 2024-01-31 実験手法 X-RAY DIFFRACTION (1.59 Å) 主引用文献 Crystal structure of IpgC in complex with a follow-up compound based on J20 To be published
6ZM6	Human mitochondrial ribosome in complex with mRNA, A/A tRNA and P/P tRNA 分子名称: 12S mitochondrial rRNA, 16S mitochondrial rRNA, 28S ribosomal protein S10, ... 著者 Itoh, Y, Andrell, J, Amunts, A. 登録日 2020-07-01 公開日 2021-01-13 最終更新日 2023-11-15 実験手法 ELECTRON MICROSCOPY (2.59 Å) 主引用文献 Mechanism of membrane-tethered mitochondrial protein synthesis. Science, 371, 2021
6ZVI	Mbf1-ribosome complex 分子名称: 18S rRNA, 40S ribosomal protein S0-A, 40S ribosomal protein S10-A, ... 著者 Best, K.M, Denk, T, Cheng, J, Thoms, M, Berninghausen, O, Beckmann, R. 登録日 2020-07-24 公開日 2020-09-09 最終更新日 2024-05-01 実験手法 ELECTRON MICROSCOPY (3 Å) 主引用文献 EDF1 coordinates cellular responses to ribosome collisions. Elife, 9, 2020
7A5J	Structure of the split human mitoribosomal large subunit with P-and E-site mt-tRNAs 分子名称: 16S rRNA, 39S ribosomal protein L10, mitochondrial, ... 著者 Desai, N, Yang, H, Chandrasekaran, V, Kazi, R, Minczuk, M, Ramakrishnan, V. 登録日 2020-08-21 公開日 2020-12-23 最終更新日 2023-03-15 実験手法 ELECTRON MICROSCOPY (3.1 Å) 主引用文献 Elongational stalling activates mitoribosome-associated quality control. Science, 370, 2020
7A01	The Halastavi arva virus intergenic region IRES promotes translation by the simplest possible initiation mechanism 分子名称: 18S RIBOSOMAL RNA, 28S RIBOSOMAL RNA, 40S RIBOSOMAL PROTEIN ES21, ... 著者 Abaeva, I, Vicens, Q, Bochler, A, Soufari, H, Simonetti, A, Pestova, T.V, Hashem, Y, Hellen, C.U.T. 登録日 2020-08-05 公開日 2020-12-30 実験手法 ELECTRON MICROSCOPY (3.6 Å) 主引用文献 The Halastavi arva Virus Intergenic Region IRES Promotes Translation by the Simplest Possible Initiation Mechanism. Cell Rep, 33, 2020
4JI6	Crystal Structure of 30S ribosomal subunit from Thermus thermophilus 分子名称: 16S rRNA, MAGNESIUM ION, RIBOSOMAL PROTEIN S10, ... 著者 Demirci, H, Wang, L, Murphy IV, F, Murphy, E, Carr, J, Blanchard, S, Jogl, G, Dahlberg, A.E, Gregory, S.T. 登録日 2013-03-05 公開日 2013-11-06 最終更新日 2013-12-04 実験手法 X-RAY DIFFRACTION (3.55 Å) 主引用文献 The central role of protein S12 in organizing the structure of the decoding site of the ribosome. Rna, 19, 2013

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