PDB: 19260 件ウェブページステータス検索Chemie searchBIRD

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8OO6	Pol I bound to extended and displaced DNA section - closed conformation 分子名称: DNA polymerase I, Displaced primer, Extending Primer, ... 著者 Botto, M, Borsellini, A, Lamers, M.H. 登録日 2023-04-04 公開日 2023-08-09 最終更新日 2023-11-01 実験手法 ELECTRON MICROSCOPY (4.3 Å) 主引用文献 A four-point molecular handover during Okazaki maturation. Nat.Struct.Mol.Biol., 30, 2023
8OOY	Pol I bound to extended and displaced DNA section - open conformation 分子名称: DNA polymerase I, Displacing Primer, Extending Primer, ... 著者 Botto, M, Borsellini, A, Lamers, M.H. 登録日 2023-04-06 公開日 2023-08-09 最終更新日 2023-11-01 実験手法 ELECTRON MICROSCOPY (4 Å) 主引用文献 A four-point molecular handover during Okazaki maturation. Nat.Struct.Mol.Biol., 30, 2023
1O4X	TERNARY COMPLEX OF THE DNA BINDING DOMAINS OF THE OCT1 AND SOX2 TRANSCRIPTION FACTORS WITH A 19MER OLIGONUCLEOTIDE FROM THE HOXB1 REGULATORY ELEMENT 分子名称: 5'-D(*CP*AP*TP*TP*AP*GP*CP*AP*TP*GP*AP*CP*AP*AP*AP*GP*AP*CP*A)-3', 5'-D(*TP*GP*TP*CP*TP*TP*TP*GP*TP*CP*AP*TP*GP*CP*TP*AP*AP*TP*G)-3', Transcription factor SOX-2, ... 著者 Clore, G.M, Williams, D.C. 登録日 2003-07-17 公開日 2004-01-27 最終更新日 2023-12-27 実験手法 SOLUTION NMR 主引用文献 Molecular basis for synergistic transcriptional activation by Oct1 and Sox2 revealed from the solution structure of the 42-kDa Oct1.Sox2.Hoxb1-DNA ternary transcription factor complex. J.Biol.Chem., 279, 2004
6ZYB	Sarcin-Ricin Loop RNA from Ecoli with a C2667-2'-OCF3 modification 分子名称: Sarcin-Ricin Loop RNA from Ecoli with a C2667-2'-OCF3 modification 著者 Ennifar, E. 登録日 2020-07-31 公開日 2020-12-16 最終更新日 2024-01-31 実験手法 X-RAY DIFFRACTION (0.9 Å) 主引用文献 2'- O -Trifluoromethylated RNA - a powerful modification for RNA chemistry and NMR spectroscopy. Chem Sci, 11, 2020
1OAO	NiZn[Fe4S4] and NiNi[Fe4S4] clusters in closed and open alpha subunits of acetyl-CoA synthase/carbon monoxide dehydrogenase 分子名称: ACETATE ION, BICARBONATE ION, CARBON MONOXIDE DEHYDROGENASE/ACETYL-COA SYNTHASE SUBUNIT ALPHA, ... 著者 Darnault, C, Volbeda, A, Kim, E.J, Legrand, P, Vernede, X, Lindahl, P.A, Fontecilla-Camps, J.C. 登録日 2003-01-20 公開日 2003-04-11 最終更新日 2023-12-13 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 Ni-Zn-[Fe4-S4] and Ni-Ni-[Fe4-S4] Clusters in Closed and Open Alpha Subunits of Acetyl-Coa Synthase/Carbon Monoxide Dehydrogenase Nat.Struct.Biol., 10, 2003
1NMZ	Crystal structure of human thymidylate kinase with NH2TMP and AppNHp 分子名称: 3'-DEOXY-3'-AMINOTHYMIDINE MONOPHOSPHATE, MAGNESIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER, ... 著者 Ostermann, N, Segura-Pena, D, Meier, C, Veit, T, Monnerjahn, M, Konrad, M, Lavie, A. 登録日 2003-01-12 公開日 2003-03-18 最終更新日 2024-02-14 実験手法 X-RAY DIFFRACTION (1.75 Å) 主引用文献 Structures of human thymidylate kinase in complex with prodrugs: implications for the structure-based design of novel compounds Biochemistry, 42, 2003
6ZNP	Crystal Structure of DUF1998 helicase MrfA bound to DNA 分子名称: CITRIC ACID, Uncharacterized ATP-dependent helicase YprA, ZINC ION, ... 著者 Roske, J.J, Liu, S, Loll, B, Neu, U, Wahl, M.C. 登録日 2020-07-06 公開日 2020-11-25 最終更新日 2021-01-20 実験手法 X-RAY DIFFRACTION (3.16 Å) 主引用文献 A skipping rope translocation mechanism in a widespread family of DNA repair helicases. Nucleic Acids Res., 49, 2021
6ZNQ	Crystal Structure of DUF1998 helicase MrfA bound to DNA and AMPPNP 分子名称: CITRIC ACID, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER, Uncharacterized ATP-dependent helicase YprA, ... 著者 Roske, J.J, Liu, S, Loll, B, Neu, U, Wahl, M.C. 登録日 2020-07-06 公開日 2020-11-25 最終更新日 2024-05-01 実験手法 X-RAY DIFFRACTION (3.34 Å) 主引用文献 A skipping rope translocation mechanism in a widespread family of DNA repair helicases. Nucleic Acids Res., 49, 2021
8OIS	28S human mitochondrial small ribosomal subunit with mtRF1 and P-site tRNA 分子名称: 12S rRNA, 28S ribosomal protein S10, mitochondrial, ... 著者 Saurer, M, Leibundgut, M, Scaiola, A, Schoenhut, T, Ban, N. 登録日 2023-03-23 公開日 2023-06-14 最終更新日 2024-04-24 実験手法 ELECTRON MICROSCOPY (3 Å) 主引用文献 Molecular basis of translation termination at noncanonical stop codons in human mitochondria. Science, 380, 2023
8OIR	55S human mitochondrial ribosome with mtRF1 and P-site tRNA 分子名称: 12S rRNA, 16S rRNA, 28S ribosomal protein S10, ... 著者 Saurer, M, Leibundgut, M, Scaiola, A, Schoenhut, T, Ban, N. 登録日 2023-03-23 公開日 2023-06-14 最終更新日 2024-06-26 実験手法 ELECTRON MICROSCOPY (3.1 Å) 主引用文献 Molecular basis of translation termination at noncanonical stop codons in human mitochondria. Science, 380, 2023
8OIT	39S human mitochondrial large ribosomal subunit with mtRF1 and P-site tRNA 分子名称: 16S rRNA, 39S ribosomal protein L1, mitochondrial, ... 著者 Saurer, M, Leibundgut, M, Scaiola, A, Schoenhut, T, Ban, N. 登録日 2023-03-23 公開日 2023-06-14 最終更新日 2024-06-26 実験手法 ELECTRON MICROSCOPY (2.9 Å) 主引用文献 Molecular basis of translation termination at noncanonical stop codons in human mitochondria. Science, 380, 2023
1NMX	Crystal structure of human thymidylate kinase with FLTMP and ADP 分子名称: 3'-FLUORO-3'-DEOXYTHYMIDINE MONOPHOSPHATE, ADENOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, ... 著者 Ostermann, N, Segura-Pena, D, Meier, C, Veit, T, Monnerjahn, M, Konrad, M, Lavie, A. 登録日 2003-01-12 公開日 2003-03-18 最終更新日 2024-02-14 実験手法 X-RAY DIFFRACTION (1.7 Å) 主引用文献 Structures of human thymidylate kinase in complex with prodrugs: implications for the structure-based design of novel compounds Biochemistry, 42, 2003
1NN1	Crystal structure of human thymidylate kinase with ddTMP and AppNHp 分子名称: 3'-DEOXYTHYMIDINE-5'-MONOPHOSPHATE, MAGNESIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER, ... 著者 Ostermann, N, Segura-Pena, D, Meier, C, Veit, T, Monnerjahn, M, Konrad, M, Lavie, A. 登録日 2003-01-12 公開日 2003-03-18 最終更新日 2024-02-14 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 Structures of human thymidylate kinase in complex with prodrugs: implications for the structure-based design of novel compounds Biochemistry, 42, 2003
1NN3	Crystal structure of human thymidylate kinase with d4TMP + ADP 分子名称: 3'-DEOXYTHYMIDINE-5'-MONOPHOSPHATE, ADENOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, ... 著者 Ostermann, N, Segura-Pena, D, Meier, C, Veit, T, Monnerjahn, M, Konrad, M, Lavie, A. 登録日 2003-01-12 公開日 2003-03-18 最終更新日 2024-02-14 実験手法 X-RAY DIFFRACTION (1.55 Å) 主引用文献 Structures of human thymidylate kinase in complex with prodrugs: implications for the structure-based design of novel compounds Biochemistry, 42, 2003
1KZ2	Solution structure of the third helix of Antennapedia homeodomain derivative [W6F,W14F] 分子名称: Antennapedia protein 著者 Czajlik, A, Mesko, E, Penke, B, Perczel, A. 登録日 2002-02-06 公開日 2002-02-20 最終更新日 2024-05-22 実験手法 SOLUTION NMR 主引用文献 Investigation of penetratin peptides. Part 1. The environment dependent conformational properties of penetratin and two of its derivatives. J.Pept.Sci., 8, 2002
1LE1	NMR Structure of Tryptophan Zipper 2: A stable, Monomeric Beta-Hairpin with a Type I' Turn 分子名称: Tryptophan Zipper 2 著者 Cochran, A.G, Skelton, N.J, Starovasnik, M.A. 登録日 2002-04-09 公開日 2002-04-24 最終更新日 2022-02-23 実験手法 SOLUTION NMR 主引用文献 Tryptophan zippers: stable, monomeric beta -hairpins. Proc.Natl.Acad.Sci.USA, 98, 2001
7EK4	prawn ferritin to coordinate with heavy metal ions 分子名称: FE (III) ION, Ferritin, MERCURY (II) ION 著者 Wang, Y, Zang, J. 登録日 2021-04-03 公開日 2021-12-29 最終更新日 2023-11-29 実験手法 X-RAY DIFFRACTION (2.3 Å) 主引用文献 Structural Insights for the Stronger Ability of Shrimp Ferritin to Coordinate with Heavy Metal Ions as Compared to Human H-Chain Ferritin. Int J Mol Sci, 22, 2021
7EK7	prawn ferritin to coordinate with heavy metal ions 分子名称: Ferritin, MERCURY (II) ION 著者 Wang, Y, Zang, J. 登録日 2021-04-04 公開日 2021-12-29 最終更新日 2023-11-29 実験手法 X-RAY DIFFRACTION (2.7 Å) 主引用文献 Structural Insights for the Stronger Ability of Shrimp Ferritin to Coordinate with Heavy Metal Ions as Compared to Human H-Chain Ferritin. Int J Mol Sci, 22, 2021
7EK5	prawn ferritin to coordinate with heavy metal ions 分子名称: CADMIUM ION, FE (III) ION, Ferritin 著者 Wang, Y, Zang, J. 登録日 2021-04-03 公開日 2021-12-29 最終更新日 2023-11-29 実験手法 X-RAY DIFFRACTION (3 Å) 主引用文献 Structural Insights for the Stronger Ability of Shrimp Ferritin to Coordinate with Heavy Metal Ions as Compared to Human H-Chain Ferritin. Int J Mol Sci, 22, 2021
8J7R	Cryo-EM structure of the J-K-St region of EMCV IRES in complex with eIF4G-HEAT1 and eIF4A (J-K-St/eIF4G focused) 分子名称: Eukaryotic translation initiation factor 4 gamma 1, IRES RNA (J-K-St), MAGNESIUM ION 著者 Suzuki, H, Fujiyoshi, Y, Imai, S, Shimada, I. 登録日 2023-04-28 公開日 2023-08-02 最終更新日 2023-09-13 実験手法 ELECTRON MICROSCOPY (3.7 Å) 主引用文献 Dynamically regulated two-site interaction of viral RNA to capture host translation initiation factor. Nat Commun, 14, 2023
8J07	96nm repeat of human respiratory doublet microtubule and associated axonemal complexes 分子名称: ACTA2, Axonemal dynein light intermediate polypeptide 1, Calaxin, ... 著者 Gui, M, Brown, A. 登録日 2023-04-09 公開日 2023-07-26 最終更新日 2023-08-02 実験手法 ELECTRON MICROSCOPY (4.1 Å) 主引用文献 Axonemal structures reveal mechanoregulatory and disease mechanisms. Nature, 618, 2023
1KZ0	Solution structure of the third helix of Antennapedia homeodomain 分子名称: Antennapedia protein 著者 Czajlik, A, Mesko, E, Penke, B, Perczel, A. 登録日 2002-02-06 公開日 2002-02-20 最終更新日 2024-05-22 実験手法 SOLUTION NMR 主引用文献 Investigation of penetratin peptides. Part 1. The environment dependent conformational properties of penetratin and two of its derivatives. J.Pept.Sci., 8, 2002
1NMY	Crystal structure of human thymidylate kinase with FLTMP and AppNHp 分子名称: 3'-FLUORO-3'-DEOXYTHYMIDINE MONOPHOSPHATE, ADENOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, ... 著者 Ostermann, N, Segura-Pena, D, Meier, C, Veit, T, Monnerjahn, M, Konrad, M, Lavie, A. 登録日 2003-01-12 公開日 2003-03-18 最終更新日 2024-02-14 実験手法 X-RAY DIFFRACTION (1.6 Å) 主引用文献 Structures of human thymidylate kinase in complex with prodrugs: implications for the structure-based design of novel compounds Biochemistry, 42, 2003
8JIL	Cryo-EM structure of niacin bound ketone body receptor HCAR2-Gi signaling complex 分子名称: CHOLESTEROL, Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1, ... 著者 Zhao, C, Tian, X.W, Liu, Y, Cheng, L, Yan, W, Shao, Z.H. 登録日 2023-05-26 公開日 2023-09-06 最終更新日 2023-09-27 実験手法 ELECTRON MICROSCOPY (3.5 Å) 主引用文献 Biased allosteric activation of ketone body receptor HCAR2 suppresses inflammation. Mol.Cell, 83, 2023
8IXB	GMPCPP-Alpha1A/Beta2A-microtubule decorated with kinesin seam region 分子名称: ADENOSINE-5'-TRIPHOSPHATE, GUANOSINE-5'-TRIPHOSPHATE, Kinesin-1 heavy chain, ... 著者 Zheng, W, Zhao, Q.Y, Diao, L, Bao, L, Cong, Y. 登録日 2023-03-31 公開日 2023-08-16 最終更新日 2023-10-25 実験手法 ELECTRON MICROSCOPY (4.2 Å) 主引用文献 Cryo-EM of alpha-tubulin isotype-containing microtubules revealed a contracted structure of alpha 4A/ beta 2A microtubules. Acta Biochim.Biophys.Sin., 55, 2023

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