Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

5JRJ
DownloadVisualize
BU of 5jrj by Molmil
Crystal Structure of Herbaspirillum seropedicae RecA
分子名称: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, CALCIUM ION, ...
著者Leite, W.C, Galvao, C.W, Saab, S.C, Iulek, J, Etto, R.M, Steffens, M.B.R, Chitteni-Pattu, S, Stanage, T, Keck, J.L, Cox, M.M.
登録日2016-05-06
公開日2016-08-03
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Structural and Functional Studies of H. seropedicae RecA Protein - Insights into the Polymerization of RecA Protein as Nucleoprotein Filament.
PLoS ONE, 11, 2016
7X3V
DownloadVisualize
BU of 7x3v by Molmil
Cryo-EM structure of IOC3-N2 nucleosome
分子名称: DNA (146-MER), Histone H2A, Histone H2B 1.1, ...
著者Lifei, L, Kangjing, C, Chen, Z.
登録日2022-03-01
公開日2023-09-20
最終更新日2024-02-28
実験手法ELECTRON MICROSCOPY (3.09 Å)
主引用文献Structure of the ISW1a complex bound to the dinucleosome.
Nat.Struct.Mol.Biol., 31, 2024
5JRN
DownloadVisualize
BU of 5jrn by Molmil
Crystal Structure of a Xylanase in Complex with a Monosaccharide at 2.84 Angstroem resolution
分子名称: Endo-1,4-beta-xylanase, GLYCEROL, methyl beta-D-xylopyranoside
著者Gomez, S, Payne, A.M, Savko, M, Fox, G.C, Shepard, W.E, Fernandez, F.J, Vega, M.C.
登録日2016-05-06
公開日2017-05-24
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.841 Å)
主引用文献Crystal Structure of a Xylanase in Complex with a Monosaccharide at 2.84 Angstroem resolution
To Be Published
5JSC
DownloadVisualize
BU of 5jsc by Molmil
Crystal structure of a Putative acyl-CoA dehydrogenase from Burkholderia xenovorans
分子名称: 1,2-ETHANEDIOL, CHLORIDE ION, FLAVIN-ADENINE DINUCLEOTIDE, ...
著者Seattle Structural Genomics Center for Infectious Disease (SSGCID)
登録日2016-05-07
公開日2016-06-08
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Crystal structure of a Putative acyl-CoA dehydrogenase from Burkholderia xenovorans
to be published
5JWS
DownloadVisualize
BU of 5jws by Molmil
T4 Lysozyme L99A with 1-Hydro-2-ethyl-1,2-azaborine Bound
分子名称: 2-ethyl-1,2-dihydro-1,2-azaborinine, CHLORIDE ION, Endolysin
著者Lee, H, Fischer, M, Shoichet, B.K, Liu, S.-Y.
登録日2016-05-12
公開日2016-09-21
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献Hydrogen Bonding of 1,2-Azaborines in the Binding Cavity of T4 Lysozyme Mutants: Structures and Thermodynamics.
J.Am.Chem.Soc., 138, 2016
7Y9J
DownloadVisualize
BU of 7y9j by Molmil
Crystal structure of P450 BM3-TMK from Bacillus megaterium in complex with 5-nitro-1,2-benzisoxazole
分子名称: 5-nitro-1,2-benzoxazole, Bifunctional cytochrome P450/NADPH--P450 reductase, PROTOPORPHYRIN IX CONTAINING FE
著者Wang, Q, Zhang, L.L, Liu, W.D, Huang, J.-W, Yang, Y, Chen, C.-C, Guo, R.-T.
登録日2022-06-24
公開日2023-06-28
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.83 Å)
主引用文献Engineering of a P450-based Kemp eliminase with a new mechanism
Chinese J Catal, 47, 2023
7Y9K
DownloadVisualize
BU of 7y9k by Molmil
Crystal structure of P450 BM3-TMK from Bacillus megaterium
分子名称: Bifunctional cytochrome P450/NADPH--P450 reductase, PROTOPORPHYRIN IX CONTAINING FE
著者Wang, Q, Zhang, L.L, Liu, W.D, Huang, J.-W, Yang, Y, Chen, C.-C, Guo, R.-T.
登録日2022-06-25
公開日2023-06-28
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.23 Å)
主引用文献Engineering of a P450-based Kemp eliminase with a new mechanism
Chinese J Catal, 47, 2023
7Y0A
DownloadVisualize
BU of 7y0a by Molmil
Crystal structure of human short-chain acyl-CoA dehydrogenase
分子名称: FLAVIN-ADENINE DINUCLEOTIDE, FORMIC ACID, Short-chain specific acyl-CoA dehydrogenase, ...
著者Huang, Y, Xu, Y, Li, J.
登録日2022-06-04
公開日2023-07-05
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.317 Å)
主引用文献Crystal structure of human short-chain acyl-CoA dehydrogenase
To Be Published
7Y0B
DownloadVisualize
BU of 7y0b by Molmil
Crystal structure of human short-chain acyl-CoA dehydrogenase
分子名称: (2S,3R,4R,5S,6R)-2-[4-chloranyl-3-[[4-[(3S)-oxolan-3-yl]oxyphenyl]methyl]phenyl]-6-(hydroxymethyl)oxane-3,4,5-triol, FLAVIN-ADENINE DINUCLEOTIDE, Short-chain specific acyl-CoA dehydrogenase, ...
著者Huang, Y, Xu, Y, Li, J.
登録日2022-06-04
公開日2023-07-05
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.076 Å)
主引用文献Crystal structure of human short-chain acyl-coA dehydrogenase
To Be Published
7Y2D
DownloadVisualize
BU of 7y2d by Molmil
HSA-Cu agent complex
分子名称: 13-methoxy-~{N},~{N}-dimethyl-2-oxa-4-thia-6,7$l^{4}-diaza-3$l^{3}-cupratricyclo[7.4.0.0^{3,7}]trideca-1(9),5,7,10,12-pentaen-5-amine, PALMITIC ACID, Serum albumin
著者Zhang, Z.L, Yang, F.
登録日2022-06-09
公開日2023-07-05
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structure of HSA-Cu agent complex
To Be Published
5KF6
DownloadVisualize
BU of 5kf6 by Molmil
Structure of proline utilization A from Sinorhizobium meliloti complexed with L-tetrahydrofuroic acid and NAD+ in space group P21
分子名称: Bifunctional protein PutA, FLAVIN-ADENINE DINUCLEOTIDE, MAGNESIUM ION, ...
著者Tanner, J.J.
登録日2016-06-12
公開日2016-10-05
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Structures of Proline Utilization A (PutA) Reveal the Fold and Functions of the Aldehyde Dehydrogenase Superfamily Domain of Unknown Function.
J.Biol.Chem., 291, 2016
7Y51
DownloadVisualize
BU of 7y51 by Molmil
Acetylxylan esterase from Caldanaerobacter subterraneus subsp. tengcongensis TTE0866 delta100 mutant
分子名称: GLYCEROL, NICKEL (II) ION, Predicted xylanase/chitin deacetylase
著者Sasamoto, K, Himiyama, T, Moriyoshi, K, Ohmoto, T, Uegaki, K, Nakamura, T, Nishiya, Y.
登録日2022-06-16
公開日2022-08-31
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.45 Å)
主引用文献Functional analysis of the N-terminal region of acetylxylan esterase from Caldanaerobacter subterraneus subsp. tengcongensis.
Febs Open Bio, 12, 2022
5KAH
DownloadVisualize
BU of 5kah by Molmil
Crystal structure of a dioxygenase in the Crotonase superfamily in P21, V425T mutant
分子名称: (3,5-dihydroxyphenyl)acetyl-CoA 1,2-dioxygenase, [(2R,3S,4R,5R)-5-(6-AMINO-9H-PURIN-9-YL)-4-HYDROXY-3-(PHOSPHONOOXY)TETRAHYDROFURAN-2-YL]METHYL (3R)-4-({3-[(2-{[(3,5-DIHYDROXYPHENYL)ACETYL]AMINO}ETHYL)AMINO]-3-OXOPROPYL}AMINO)-3-HYDROXY-2,2-DIMETHYL-4-OXOBUTYL DIHYDROGEN DIPHOSPHATE
著者Li, K, Fielding, E.N, Condurso, H.L, Bruner, S.D.
登録日2016-06-01
公開日2017-06-21
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2.779 Å)
主引用文献Probing the structural basis of oxygen binding in a cofactor-independent dioxygenase.
Acta Crystallogr D Struct Biol, 73, 2017
5KDY
DownloadVisualize
BU of 5kdy by Molmil
The crystal structure of the D251N mutant of CYP199A4 in complex with 4-methoxybenzoate
分子名称: 4-METHOXYBENZOIC ACID, CHLORIDE ION, Cytochrome P450, ...
著者Coleman, T, Bruning, J.B, Bell, S.G.
登録日2016-06-08
公開日2018-02-07
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.589 Å)
主引用文献The crystal structure of the D251N mutant of CYP199A4 in complex with 4-methoxybenzoate
To Be Published
5KF0
DownloadVisualize
BU of 5kf0 by Molmil
Crystal structure of an Aldedhyde dehydrogenase from Burkholderia vietnamiensis
分子名称: (4R)-2-METHYLPENTANE-2,4-DIOL, (4S)-2-METHYL-2,4-PENTANEDIOL, ACETATE ION, ...
著者Seattle Structural Genomics Center for Infectious Disease (SSGCID)
登録日2016-06-10
公開日2016-11-09
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Crystal structure of an Aldedhyde dehydrogenase from Burkholderia vietnamiensis
to be published
5JOZ
DownloadVisualize
BU of 5joz by Molmil
Bacteroides ovatus Xyloglucan PUL GH43B
分子名称: CALCIUM ION, Non-reducing end alpha-L-arabinofuranosidase BoGH43B
著者Hemsworth, G.R, Thompson, A.J, Stepper, J, Sobala, L.F, Coyle, T, Larsbrink, J, Spadiut, O, Stubbs, K.A, Brumer, H, Davies, G.J.
登録日2016-05-03
公開日2016-08-10
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.28 Å)
主引用文献Structural dissection of a complex Bacteroides ovatus gene locus conferring xyloglucan metabolism in the human gut.
Open Biology, 6, 2016
3QED
DownloadVisualize
BU of 3qed by Molmil
The structure and function of an arabinan-specific alpha-1,2-arabinofuranosidase identified from screening the activities of bacterial GH43 glycoside hydrolases
分子名称: Beta-xylosidase/alpha-L-arabinfuranosidase, gly43N, CALCIUM ION, ...
著者Cartmell, A, Mckee, L.S, Pena, M, Larsbrink, J, Brumer, H, Lewis, R.J, Viks-Nielsen, A, Gilbert, H.J, Marles-Wright, J.
登録日2011-01-20
公開日2011-02-16
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (2.99 Å)
主引用文献The Structure and Function of an Arabinan-specific {alpha}-1,2-Arabinofuranosidase Identified from Screening the Activities of Bacterial GH43 Glycoside Hydrolases.
J.Biol.Chem., 286, 2011
7Y0W
DownloadVisualize
BU of 7y0w by Molmil
Local structure of BD55-5514 and BD55-5840 Fab and Omicron BA.1 RBD complex
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, BD55-5514H, BD55-5514L, ...
著者Zhang, Z, Xiao, J.
登録日2022-06-06
公開日2022-09-28
最終更新日2023-04-12
実験手法ELECTRON MICROSCOPY (3.42 Å)
主引用文献Rational identification of potent and broad sarbecovirus-neutralizing antibody cocktails from SARS convalescents.
Cell Rep, 41, 2022
5JXZ
DownloadVisualize
BU of 5jxz by Molmil
A low magnesium structure of the isochorismate synthase, EntC
分子名称: (3R,4R)-3-[(1-carboxyethenyl)oxy]-4-hydroxycyclohexa-1,5-diene-1-carboxylic acid, (5S,6S)-5-[(1-carboxyethenyl)oxy]-6-hydroxycyclohexa-1,3-diene-1-carboxylic acid, Isochorismate synthase EntC, ...
著者Meneely, K.M, Sundlov, J.A, Gulick, A.M, Lamb, A.L.
登録日2016-05-13
公開日2016-07-20
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.88 Å)
主引用文献An Open and Shut Case: The Interaction of Magnesium with MST Enzymes.
J.Am.Chem.Soc., 138, 2016
7Y0V
DownloadVisualize
BU of 7y0v by Molmil
The co-crystal structure of BA.1-RBD with Fab-5549
分子名称: 5549-Fab, Spike protein S1, beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose
著者Xiao, J.Y, Zhang, Y.
登録日2022-06-06
公開日2022-09-28
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.48 Å)
主引用文献Rational identification of potent and broad sarbecovirus-neutralizing antibody cocktails from SARS convalescents.
Cell Rep, 41, 2022
5K12
DownloadVisualize
BU of 5k12 by Molmil
Cryo-EM structure of glutamate dehydrogenase at 1.8 A resolution
分子名称: Glutamate dehydrogenase 1, mitochondrial
著者Merk, A, Bartesaghi, A, Banerjee, S, Falconieri, V, Rao, P, Earl, L, Milne, J, Subramaniam, S.
登録日2016-05-17
公開日2016-06-08
最終更新日2024-03-06
実験手法ELECTRON MICROSCOPY (1.8 Å)
主引用文献Breaking Cryo-EM Resolution Barriers to Facilitate Drug Discovery.
Cell, 165, 2016
7Y0C
DownloadVisualize
BU of 7y0c by Molmil
Crystal structure of BD55-1403 and SARS-CoV-2 Omicron RBD
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, BD55-1403 Fab heavy chain, BD55-1403 Fab light chain, ...
著者Zhang, Z, Xiao, J.
登録日2022-06-04
公開日2022-09-28
最終更新日2023-04-12
実験手法X-RAY DIFFRACTION (2.94 Å)
主引用文献Rational identification of potent and broad sarbecovirus-neutralizing antibody cocktails from SARS convalescents.
Cell Rep, 41, 2022
5K2N
DownloadVisualize
BU of 5k2n by Molmil
lysozyme with nano particles
分子名称: Lysozyme C
著者Ko, S, Choe, J.
登録日2016-05-19
公開日2017-05-31
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献Crystal Structure of Lysozyme
To Be Published
5K3J
DownloadVisualize
BU of 5k3j by Molmil
Crystals structure of Acyl-CoA oxidase-2 in Caenorhabditis elegans bound with FAD, ascaroside-CoA, and ATP
分子名称: ADENOSINE-5'-TRIPHOSPHATE, Acyl-coenzyme A oxidase, FLAVIN-ADENINE DINUCLEOTIDE, ...
著者Zhang, X, Li, K, Jones, R.A, Bruner, S.D, Butcher, R.A.
登録日2016-05-19
公開日2016-08-24
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2.68 Å)
主引用文献Structural characterization of acyl-CoA oxidases reveals a direct link between pheromone biosynthesis and metabolic state in Caenorhabditis elegans.
Proc.Natl.Acad.Sci.USA, 113, 2016
5K7O
DownloadVisualize
BU of 5k7o by Molmil
MicroED structure of lysozyme at 1.8 A resolution
分子名称: CHLORIDE ION, Lysozyme C, SODIUM ION
著者de la Cruz, M.J, Hattne, J, Shi, D, Seidler, P, Rodriguez, J, Reyes, F.E, Sawaya, M.R, Cascio, D, Eisenberg, D, Gonen, T.
登録日2016-05-26
公開日2017-04-05
最終更新日2018-08-22
実験手法ELECTRON CRYSTALLOGRAPHY (1.8 Å)
主引用文献Atomic-resolution structures from fragmented protein crystals with the cryoEM method MicroED.
Nat. Methods, 14, 2017

222415

件を2024-07-10に公開中

PDB statisticsPDBj update infoContact PDBjnumon