PDB: 2262 件ウェブページステータス検索Chemie searchBIRD

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7KAP	Cryo-EM structure of the Sec complex from S. cerevisiae, Sec61 pore mutant, class with Sec62, conformation 1 (C1) 分子名称: Protein translocation protein SEC63, Protein transport protein SBH1, Protein transport protein SEC61, ... 著者 Itskanov, S, Park, E. 登録日 2020-10-01 公開日 2021-01-06 最終更新日 2025-05-14 実験手法 ELECTRON MICROSCOPY (4.1 Å) 主引用文献 Stepwise gating of the Sec61 protein-conducting channel by Sec63 and Sec62. Nat.Struct.Mol.Biol., 28, 2021
7KB5	Cryo-EM structure of the Sec complex from yeast, Sec63 FN3 and residues 210-216 mutated 分子名称: Protein translocation protein SEC63, Protein transport protein SBH1, Protein transport protein SEC61, ... 著者 Itskanov, S, Park, E. 登録日 2020-10-01 公開日 2021-01-06 最終更新日 2025-05-14 実験手法 ELECTRON MICROSCOPY (3.8 Å) 主引用文献 Stepwise gating of the Sec61 protein-conducting channel by Sec63 and Sec62. Nat.Struct.Mol.Biol., 28, 2021
5DYE	CRYSTAL STRUCTURE OF THE FULL LENGTH S156E MUTANT OF HUMAN AQUAPORIN 5 分子名称: Aquaporin-5, O-[(S)-{[(2S)-2-(hexanoyloxy)-3-(tetradecanoyloxy)propyl]oxy}(hydroxy)phosphoryl]-D-serine 著者 Kitchen, P, Oeberg, F, Sjoehamn, J, Hedfalk, K, Bill, R.M, Conner, A.C, Conner, M.T, Toernroth-Horsefield, S. 登録日 2015-09-24 公開日 2015-12-02 最終更新日 2024-05-08 実験手法 X-RAY DIFFRACTION (3.5 Å) 主引用文献 Plasma Membrane Abundance of Human Aquaporin 5 Is Dynamically Regulated by Multiple Pathways. Plos One, 10, 2015
6XMP	Structure of P5A-ATPase Spf1, Apo form 分子名称: DODECYL-BETA-D-MALTOSIDE, P5A-type ATPase 著者 Park, E, Sim, S.I. 登録日 2020-06-30 公開日 2020-09-23 最終更新日 2025-05-21 実験手法 ELECTRON MICROSCOPY (3.5 Å) 主引用文献 The endoplasmic reticulum P5A-ATPase is a transmembrane helix dislocase. Science, 369, 2020
5FC8	Mouse importin alpha: Dengue 3 NS5 C-terminal NLS peptide complex 分子名称: Importin subunit alpha-1, Nonstructural protein 5 著者 Smith, K.M, Forwood, J.K. 登録日 2015-12-15 公開日 2016-05-18 最終更新日 2023-09-27 実験手法 X-RAY DIFFRACTION (2.1 Å) 主引用文献 The C-terminal 18 Amino Acid Region of Dengue Virus NS5 Regulates its Subcellular Localization and Contains a Conserved Arginine Residue Essential for Infectious Virus Production. PLoS Pathog., 12, 2016
6XWY	Highly pH-resistant long stokes-shift, red fluorescent protein mCRISPRed 分子名称: 1,2-ETHANEDIOL, MALONIC ACID, Red fluorescent protein eqFP611 著者 Erdogan, M, Fabritius, A, Basquin, J, Griesbeck, O. 登録日 2020-01-24 公開日 2020-02-05 最終更新日 2024-01-24 実験手法 X-RAY DIFFRACTION (1.75 Å) 主引用文献 Targeted In Situ Protein Diversification and Intra-organelle Validation in Mammalian Cells. Cell Chem Biol, 27, 2020
5FKI	Pseudorabies virus (PrV) nuclear egress complex proteins fitted as a hexameric lattice into a sub-tomogram average derived from focused- ion beam milled lamellae electron cryo-microscopic data 分子名称: CHLORIDE ION, UL31, UL34 protein, ... 著者 Hagen, C, Dent, K.C, Zeev Ben Mordehai, T, Vasishtan, D, Antonin, W, Mettenleiter, T.C, Gruenewald, K. 登録日 2015-10-16 公開日 2016-03-16 最終更新日 2024-10-23 実験手法 ELECTRON MICROSCOPY (35 Å) 主引用文献 Crystal Structure of the Herpesvirus Nuclear Egress Complex Provides Insights Into Inner Nuclear Membrane Remodelling Cell Rep., 13, 2015
5FIA	Structure of the effector protein LpiR1 (Lpg0634) from Legionella pneumophila 分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, LpiR1 著者 Beyrakhova, K, van Straaten, K, Cygler, M. 登録日 2015-12-22 公開日 2016-01-27 最終更新日 2024-03-06 実験手法 X-RAY DIFFRACTION (1.75 Å) 主引用文献 Structural and Functional Investigations of the Effector Protein LpiR1 from Legionella pneumophila. J.Biol.Chem., 291, 2016
4ZBL	Phototoxic fluorescent protein mKillerOrange 分子名称: CITRIC ACID, GLYCEROL, KillerOrange 著者 Pletnev, V.Z, Pletneva, N.V, Pletnev, S.V. 登録日 2015-04-14 公開日 2015-12-23 最終更新日 2024-11-06 実験手法 X-RAY DIFFRACTION (1.57 Å) 主引用文献 Crystal Structure of Phototoxic Orange Fluorescent Proteins with a Tryptophan-Based Chromophore. Plos One, 10, 2015
6TA7	CRYSTAL STRUCTURE OF HUMAN G3BP1-NTF2 IN COMPLEX WITH HUMAN CAPRIN1-DERIVED SOLOMON MOTIF 分子名称: CHLORIDE ION, Caprin-1, Ras GTPase-activating protein-binding protein 1, ... 著者 Schulte, T, Achour, A, Panas, M.D, McInerney, G.M. 登録日 2019-10-29 公開日 2021-05-12 最終更新日 2024-01-24 実験手法 X-RAY DIFFRACTION (1.93 Å) 主引用文献 Caprin-1 binding to the critical stress granule protein G3BP1 is regulated by pH Biorxiv, 2021
4ZVR	Caspase-7 Variant 4 (V4) with reprogrammed substrate specificity due to Y230V/W232Y/S234V/Q276D substitutions bound to DEVD inhibitor. 分子名称: Caspase-7, Peptide ACE-ASP-GLU-VAL-ASJ 著者 Hill, M.E, MacPherson, D.J, Hardy, J.A. 登録日 2015-05-18 公開日 2016-04-20 最終更新日 2023-11-15 実験手法 X-RAY DIFFRACTION (2.3 Å) 主引用文献 Reprogramming Caspase-7 Specificity by Regio-Specific Mutations and Selection Provides Alternate Solutions for Substrate Recognition. Acs Chem.Biol., 11, 2016
4ZVT	Caspase-7 Variant 1 (V1) with reprogrammed substrate specificity due to Y230A/W232M/S234N substitutions, bound to VEID inhibitor. 分子名称: Caspase-7, VEID inhibitor 著者 Hardy, J.A, MacPherson, D.J, Hill, M.E. 登録日 2015-05-18 公開日 2016-04-20 最終更新日 2023-11-15 実験手法 X-RAY DIFFRACTION (2.85 Å) 主引用文献 Reprogramming Caspase-7 Specificity by Regio-Specific Mutations and Selection Provides Alternate Solutions for Substrate Recognition. Acs Chem.Biol., 11, 2016
4ZVP	Caspase-7 Variant 2 (V2) with reprogrammed substrate specificity due to Y230V/W232M/Q276C substitutions bound to DEVD inhibitor. 分子名称: Caspase-7, Peptide ACE-ASP-GLU-VAL-ASA 著者 Hill, M.E, MacPherson, D.J, Hardy, J.A. 登録日 2015-05-18 公開日 2016-04-20 最終更新日 2024-10-30 実験手法 X-RAY DIFFRACTION (2.5 Å) 主引用文献 Reprogramming Caspase-7 Specificity by Regio-Specific Mutations and Selection Provides Alternate Solutions for Substrate Recognition. Acs Chem.Biol., 11, 2016
4ZFS	Phototoxic Fluorescent Protein KillerOrange 分子名称: KillerOrange 著者 Pletneva, N.V, Pletnev, V.Z, Pletnev, S. 登録日 2015-04-21 公開日 2015-12-23 最終更新日 2024-11-06 実験手法 X-RAY DIFFRACTION (2.01 Å) 主引用文献 Crystal Structure of Phototoxic Orange Fluorescent Proteins with a Tryptophan-Based Chromophore. Plos One, 10, 2015
4ZVQ	Caspase-7 Variant 2 (V2) with reprogrammed substrate specificity due to Y230V/W232M/Q276C substitutions bound to VEID inhibitor. 分子名称: Caspase-7, Peptide ACE-VAL-GLU-ILE-ASA 著者 Hill, M.E, MacPherson, D.J, Hardy, J.A. 登録日 2015-05-18 公開日 2016-04-20 最終更新日 2024-11-20 実験手法 X-RAY DIFFRACTION (2.5 Å) 主引用文献 Reprogramming Caspase-7 Specificity by Regio-Specific Mutations and Selection Provides Alternate Solutions for Substrate Recognition. Acs Chem.Biol., 11, 2016
4ZVU	Caspase-7 wild-type bound to the caspase-6 cognate tetrapeptide inhibitor Ac-VEID-cho 分子名称: Caspase-7, Tetrapeptide Inhibitor Ac-VEID-CHO 著者 Hardy, J.A, MacPherson, D.J, Hill, M.E. 登録日 2015-05-18 公開日 2016-04-20 最終更新日 2023-11-15 実験手法 X-RAY DIFFRACTION (2.601 Å) 主引用文献 Reprogramming Caspase-7 Specificity by Regio-Specific Mutations and Selection Provides Alternate Solutions for Substrate Recognition. Acs Chem.Biol., 11, 2016
5AZC	Crystal structure of Escherichia coli Lgt in complex with phosphatidylglycerol 分子名称: (1S)-2-{[{[(2R)-2,3-DIHYDROXYPROPYL]OXY}(HYDROXY)PHOSPHORYL]OXY}-1-[(PALMITOYLOXY)METHYL]ETHYL STEARATE, Prolipoprotein diacylglyceryl transferase 著者 Zhang, X.C, Mao, G, Zhao, Y. 登録日 2015-09-30 公開日 2016-01-27 最終更新日 2024-03-20 実験手法 X-RAY DIFFRACTION (1.902 Å) 主引用文献 Crystal structure of E. coli lipoprotein diacylglyceryl transferase Nat Commun, 7, 2016
5AZB	Crystal structure of Escherichia coli Lgt in complex with phosphatidylglycerol and the inhibitor palmitic acid 分子名称: (1S)-2-{[{[(2R)-2,3-DIHYDROXYPROPYL]OXY}(HYDROXY)PHOSPHORYL]OXY}-1-[(PALMITOYLOXY)METHYL]ETHYL STEARATE, PALMITIC ACID, Prolipoprotein diacylglyceryl transferase, ... 著者 Zhang, X.C, Mao, G, Zhao, Y. 登録日 2015-09-30 公開日 2016-01-27 最終更新日 2024-03-20 実験手法 X-RAY DIFFRACTION (1.6 Å) 主引用文献 Crystal structure of E. coli lipoprotein diacylglyceryl transferase Nat Commun, 7, 2016
5C5X	CRYSTAL STRUCTURE OF THE S156E MUTANT OF HUMAN AQUAPORIN 5 分子名称: Aquaporin-5, O-[(S)-{[(2S)-2-(hexanoyloxy)-3-(tetradecanoyloxy)propyl]oxy}(hydroxy)phosphoryl]-D-serine 著者 Kitchen, P, Oeberg, F, Sjoehamn, J, Hedfalk, K, Bill, R.M, Conner, A.C, Conner, M.T, Toernroth-Horsefield, S. 登録日 2015-06-22 公開日 2015-12-02 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (2.6 Å) 主引用文献 Plasma Membrane Abundance of Human Aquaporin 5 Is Dynamically Regulated by Multiple Pathways. Plos One, 10, 2015
4ZVS	Caspase-7 Variant 1 (V1) with reprogrammed substrate specificity due to Y230A/W232M/S234N substitutions, bound to DEVD inhibitor. 分子名称: Caspase-7, DEVD inhibitor 著者 MacPherson, D.J, Hill, M.E, Hardy, J.A. 登録日 2015-05-18 公開日 2016-04-20 最終更新日 2023-11-15 実験手法 X-RAY DIFFRACTION (2.5 Å) 主引用文献 Reprogramming Caspase-7 Specificity by Regio-Specific Mutations and Selection Provides Alternate Solutions for Substrate Recognition. Acs Chem.Biol., 11, 2016
4ZUZ	SidC 1-871 分子名称: SidC 著者 Luo, X, Wasilko, D.J, Liu, Y, Sun, J, Wu, X, Luo, Z.-Q, Mao, Y. 登録日 2015-05-18 公開日 2015-07-29 最終更新日 2024-11-13 実験手法 X-RAY DIFFRACTION (2.86 Å) 主引用文献 Structure of the Legionella Virulence Factor, SidC Reveals a Unique PI(4)P-Specific Binding Domain Essential for Its Targeting to the Bacterial Phagosome. Plos Pathog., 11, 2015
4ZVO	Caspase-7 Variant 4 (V4) with reprogrammed substrate specificity due to Y230V/W232Y/S234V/Q276D substitutions bound to VEID inhibitor. 分子名称: Caspase-7, Peptide ACE-VAL-GLU-ILE-ASJ 著者 Hill, M.E, MacPherson, D.J, Hardy, J.A. 登録日 2015-05-18 公開日 2016-04-20 最終更新日 2023-11-15 実験手法 X-RAY DIFFRACTION (2.85 Å) 主引用文献 Reprogramming Caspase-7 Specificity by Regio-Specific Mutations and Selection Provides Alternate Solutions for Substrate Recognition. Acs Chem.Biol., 11, 2016
8EYW	Beetroot dimer bound to ThT 分子名称: 2-[4-(dimethylamino)phenyl]-3,6-dimethyl-1,3-benzothiazol-3-ium, POTASSIUM ION, RNA (49-MER) 著者 Passalacqua, L.F.M, Ferre-D'Amare, A.R. 登録日 2022-10-28 公開日 2023-05-31 最終更新日 2023-10-25 実験手法 X-RAY DIFFRACTION (2.1 Å) 主引用文献 Co-crystal structures of the fluorogenic aptamer Beetroot show that close homology may not predict similar RNA architecture. Nat Commun, 14, 2023
8EYV	Structure of Beetroot dimer bound to DFHO 分子名称: (5Z)-5-[(3,5-difluoro-4-hydroxyphenyl)methylidene]-2-[(E)-(hydroxyimino)methyl]-3-methyl-3,5-dihydro-4H-imidazol-4-one, POTASSIUM ION, RNA (45-MER) 著者 Passalacqua, L.F.M, Ferre-D'Amare, A.R. 登録日 2022-10-28 公開日 2023-05-31 最終更新日 2023-10-25 実験手法 X-RAY DIFFRACTION (2.55 Å) 主引用文献 Co-crystal structures of the fluorogenic aptamer Beetroot show that close homology may not predict similar RNA architecture. Nat Commun, 14, 2023
8EYU	Structure of Beetroot dimer bound to DFAME 分子名称: POTASSIUM ION, RNA (49-MER), methyl (2E)-3-{(4Z)-4-[(3,5-difluoro-4-hydroxyphenyl)methylidene]-1-methyl-5-oxo-4,5-dihydro-1H-imidazol-2-yl}prop-2-enoate 著者 Passalacqua, L.F.M, Ferre-D'Amare, A.R. 登録日 2022-10-28 公開日 2023-05-31 最終更新日 2023-10-25 実験手法 X-RAY DIFFRACTION (1.95 Å) 主引用文献 Co-crystal structures of the fluorogenic aptamer Beetroot show that close homology may not predict similar RNA architecture. Nat Commun, 14, 2023

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