Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

5JBC
DownloadVisualize
BU of 5jbc by Molmil
Crystal structure of factor IXa variant V16I K98T Y177T I213V in complex with PPACK
分子名称: CALCIUM ION, Coagulation factor IX, D-phenylalanyl-N-[(2S,3S)-6-{[amino(iminio)methyl]amino}-1-chloro-2-hydroxyhexan-3-yl]-L-prolinamide
著者Kristensen, L.H, Brandstetter, H.
登録日2016-04-13
公開日2016-06-01
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Releasing the brakes in coagulation Factor IXa by co-operative maturation of the substrate-binding site.
Biochem.J., 473, 2016
5J8O
DownloadVisualize
BU of 5j8o by Molmil
Structure of human Programmed cell death 1 ligand 1 (PD-L1) with low molecular mass inhibitor
分子名称: (2R)-1-({3-bromo-4-[(2-methyl[1,1'-biphenyl]-3-yl)methoxy]phenyl}methyl)piperidine-2-carboxylic acid, Programmed cell death 1 ligand 1
著者Zak, K.M, Grudnik, P, Guzik, K, Zieba, B.J, Musielak, B, Doemling, P, Dubin, G, Holak, T.A.
登録日2016-04-08
公開日2016-04-27
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Structural basis for small molecule targeting of the programmed death ligand 1 (PD-L1).
Oncotarget, 7, 2016
8GEZ
DownloadVisualize
BU of 8gez by Molmil
Crystal structure of soluble lytic transglycosylase Cj0843 of Campylobacter jejuni in complex with LV8036 inhibitor
分子名称: CITRIC ACID, DIMETHYL SULFOXIDE, Lytic transglycosylase domain-containing protein, ...
著者van den Akker, F, Kumar, V.
登録日2023-03-07
公開日2023-05-24
最終更新日2023-07-05
実験手法X-RAY DIFFRACTION (1.99 Å)
主引用文献Exploring the inhibition of the soluble lytic transglycosylase Cj0843c of Campylobacter jejuni via targeting different sites with different scaffolds.
Protein Sci., 32, 2023
8GF0
DownloadVisualize
BU of 8gf0 by Molmil
Crystal structure of soluble lytic transglycosylase Cj0843 of Campylobacter jejuni in complex with LV8044 inhibitor
分子名称: 2,2-dimethyl-3-oxobutyl 2-acetamido-2-deoxy-beta-D-glucopyranoside, CITRIC ACID, DIMETHYL SULFOXIDE, ...
著者van den Akker, F, Kumar, V.
登録日2023-03-07
公開日2023-05-24
最終更新日2023-07-05
実験手法X-RAY DIFFRACTION (1.89 Å)
主引用文献Exploring the inhibition of the soluble lytic transglycosylase Cj0843c of Campylobacter jejuni via targeting different sites with different scaffolds.
Protein Sci., 32, 2023
8GFD
DownloadVisualize
BU of 8gfd by Molmil
Crystal structure of soluble lytic transglycosylase Cj0843 of Campylobacter jejuni in complex with Z3252 inhibitor
分子名称: 2-(1-benzofuran-5-yl)ethyl 2-acetamido-2-deoxy-beta-D-glucopyranoside, CITRIC ACID, DIMETHYL SULFOXIDE, ...
著者van den Akker, F, Kumar, V.
登録日2023-03-08
公開日2023-05-24
最終更新日2023-08-16
実験手法X-RAY DIFFRACTION (1.86 Å)
主引用文献Exploring the inhibition of the soluble lytic transglycosylase Cj0843c of Campylobacter jejuni via targeting different sites with different scaffolds.
Protein Sci., 32, 2023
7W11
DownloadVisualize
BU of 7w11 by Molmil
glycosyltransferase
分子名称: DIGITOXIGENIN, Glycosyltransferase, URIDINE-5'-DIPHOSPHATE, ...
著者Wei, H, Feng, L.
登録日2021-11-19
公開日2022-03-02
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.45 Å)
主引用文献Functional and Structural Dissection of a Plant Steroid 3-O-Glycosyltransferase Facilitated the Engineering Enhancement of Sugar Donor Promiscuity
Acs Catalysis, 2022
8GFI
DownloadVisualize
BU of 8gfi by Molmil
Crystal structure of soluble lytic transglycosylase Cj0843 of Campylobacter jejuni in complex with Z7285 inhibitor soaked at 3 mM concentration
分子名称: CITRIC ACID, Lytic transglycosylase domain-containing protein, [(2R)-5-oxopyrrolidin-2-yl]methyl 2-acetamido-2-deoxy-beta-D-glucopyranoside
著者van den Akker, F, Kumar, V.
登録日2023-03-08
公開日2023-05-24
最終更新日2023-08-16
実験手法X-RAY DIFFRACTION (2.15 Å)
主引用文献Exploring the inhibition of the soluble lytic transglycosylase Cj0843c of Campylobacter jejuni via targeting different sites with different scaffolds.
Protein Sci., 32, 2023
7W7J
DownloadVisualize
BU of 7w7j by Molmil
Crystal structure of IrCp* immobilized apo-R52H-rHLFr (25 equiv)
分子名称: 1,2-ETHANEDIOL, CADMIUM ION, CHLORIDE ION, ...
著者Taher, M, Maity, B, Nakane, T, Abe, S, Mazumdar, S.
登録日2021-12-05
公開日2022-03-02
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Controlled Uptake of an Iridium Complex inside Engineered apo-Ferritin Nanocages: Study of Structure and Catalysis.
Angew.Chem.Int.Ed.Engl., 61, 2022
7W0Z
DownloadVisualize
BU of 7w0z by Molmil
Glycosyltranferase UGT74AN2
分子名称: 5-[(1R,2S,4R,6R,7R,10S,11S,14S,16R)-14-hydroxy-7,11-dimethyl-3-oxapentacyclo[8.8.0.02,4.02,7.011,16]octadecan-6-yl]pyran-2-one, Glycosyltransferase, URIDINE-5'-DIPHOSPHATE
著者Wei, H, Feng, L.
登録日2021-11-18
公開日2022-03-02
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Functional and Structural Dissection of a Plant Steroid 3-O-Glycosyltransferase Facilitated the Engineering Enhancement of Sugar Donor Promiscuity
Acs Catalysis, 2022
7W09
DownloadVisualize
BU of 7w09 by Molmil
UGT74AN2, Plant Steroid Glycosyltransferase
分子名称: Glycosyltransferase
著者Wei, H, Feng, L.
登録日2021-11-18
公開日2022-03-02
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Functional and Structural Dissection of a Plant Steroid 3-O-Glycosyltransferase Facilitated the Engineering Enhancement of Sugar Donor Promiscuity
Acs Catalysis, 2022
7W1H
DownloadVisualize
BU of 7w1h by Molmil
glycosyltransferase
分子名称: Glycosyltransferase, URIDINE-5'-DIPHOSPHATE-GLUCOSE
著者Wei, H, Feng, L.
登録日2021-11-19
公開日2022-03-02
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.15 Å)
主引用文献Functional and Structural Dissection of a Plant Steroid 3-O-Glycosyltransferase Facilitated the Engineering Enhancement of Sugar Donor Promiscuity
Acs Catalysis, 2022
8G9M
DownloadVisualize
BU of 8g9m by Molmil
Acinetobacter_baumannii short-chain dehydrogenase
分子名称: Oxidoreductase, short chain dehydrogenase/reductase family
著者Shaw, K, Forwood, J.K.
登録日2023-02-21
公開日2023-05-10
最終更新日2024-05-22
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Acinetobacter_baumannii short-chain dehydrogenase
To Be Published
8GM4
DownloadVisualize
BU of 8gm4 by Molmil
Functional construct of the Eukaryotic elongation factor 2 kinase bound to an ATP-competitive inhibitor
分子名称: 7-amino-1-cyclopropyl-3-ethyl-2,4-dioxo-1,2,3,4-tetrahydropyrido[2,3-d]pyrimidine-6-carboxamide, ADENOSINE-5'-DIPHOSPHATE, CALCIUM ION, ...
著者Piserchio, A, Isiorho, E.A, Dalby, K.N, Ghose, R.
登録日2023-03-24
公開日2023-05-31
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.12 Å)
主引用文献Structure of the complex between calmodulin and a functional construct of eukaryotic elongation factor 2 kinase bound to an ATP-competitive inhibitor.
J.Biol.Chem., 299, 2023
8GFB
DownloadVisualize
BU of 8gfb by Molmil
Crystal structure of soluble lytic transglycosylase Cj0843 of Campylobacter jejuni in complex with Fv16b inhibitor
分子名称: CITRIC ACID, DIMETHYL SULFOXIDE, Lytic transglycosylase domain-containing protein, ...
著者van den Akker, F, Kumar, V.
登録日2023-03-08
公開日2023-05-24
最終更新日2023-08-16
実験手法X-RAY DIFFRACTION (2.17 Å)
主引用文献Exploring the inhibition of the soluble lytic transglycosylase Cj0843c of Campylobacter jejuni via targeting different sites with different scaffolds.
Protein Sci., 32, 2023
7W10
DownloadVisualize
BU of 7w10 by Molmil
UGT74AN2
分子名称: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Glycosyltransferase, URIDINE-5'-DIPHOSPHATE, ...
著者Wei, H, Long, F.
登録日2021-11-18
公開日2022-03-02
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.15 Å)
主引用文献Functional and Structural Dissection of a Plant Steroid 3-O-Glycosyltransferase Facilitated the Engineering Enhancement of Sugar Donor Promiscuity
Acs Catalysis, 2022
7WSJ
DownloadVisualize
BU of 7wsj by Molmil
Crystal structure of the tandem B-box domain of Arabidopsis thaliana CONSTANS
分子名称: ZINC ION, Zinc finger protein CONSTANS
著者Dahal, P, Pathak, D, Kwon, E, Kim, D.Y.
登録日2022-01-29
公開日2022-03-02
最終更新日2024-05-29
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Crystal structure of a tandem B-box domain from Arabidopsis CONSTANS.
Biochem.Biophys.Res.Commun., 599, 2022
8GBB
DownloadVisualize
BU of 8gbb by Molmil
Short-chain dehydrogenase/reductase (SDR) from multi-drug resistant Acinetobacter baumannii
分子名称: SDR family oxidoreductase
著者Shaw, K.I, Ghafoori, S.M, Forwood, J.K.
登録日2023-02-24
公開日2023-05-10
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Crystallographic structure determination and analysis of a potential short-chain dehydrogenase/reductase (SDR) from multi-drug resistant Acinetobacter baumannii.
Plos One, 18, 2023
7W0K
DownloadVisualize
BU of 7w0k by Molmil
plant glycosyltransferase
分子名称: GLYCEROL, Glycosyltransferase, URIDINE-5'-DIPHOSPHATE
著者Wei, H, Feng, L.
登録日2021-11-18
公開日2022-03-02
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.04 Å)
主引用文献Functional and Structural Dissection of a Plant Steroid 3-O-Glycosyltransferase Facilitated the Engineering Enhancement of Sugar Donor Promiscuity
Acs Catalysis, 2022
8G8K
DownloadVisualize
BU of 8g8k by Molmil
Crystal structure of Rv1916 (residues 233-398)
分子名称: 1,2-ETHANEDIOL, DI(HYDROXYETHYL)ETHER, Putative isocitrate lyase subunit B
著者Kwai, B.X.C, Bashiri, G, Leung, I.K.H.
登録日2023-02-18
公開日2023-06-07
最終更新日2024-05-22
実験手法X-RAY DIFFRACTION (1.54 Å)
主引用文献Mycobacterium tuberculosis Rv1916 is an Acetyl-CoA-Binding Protein.
Chembiochem, 24, 2023
7W1B
DownloadVisualize
BU of 7w1b by Molmil
Glycosyltransferase
分子名称: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, DIGITOXIGENIN, Glycosyltransferase, ...
著者Wei, H, Feng, L.
登録日2021-11-19
公開日2022-03-02
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.15 Å)
主引用文献Functional and Structural Dissection of a Plant Steroid 3-O-Glycosyltransferase Facilitated the Engineering Enhancement of Sugar Donor Promiscuity
Acs Catalysis, 2022
7W1N
DownloadVisualize
BU of 7w1n by Molmil
Complex structure of a leaf-branch compost cutinase variant LCC ICCG_KRP
分子名称: 1,2-ETHANEDIOL, BICINE, Leaf-branch compost cutinase
著者Niu, D, Zeng, W, Huang, J.W, Chen, C.C, Liu, W.D, Guo, R.T.
登録日2021-11-19
公開日2022-03-09
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.88 Å)
主引用文献Substrate-Binding Mode of a Thermophilic PET Hydrolase and Engineering the Enzyme to Enhance the Hydrolytic Efficacy.
Acs Catalysis, 12, 2022
7W44
DownloadVisualize
BU of 7w44 by Molmil
Complex structure of a leaf-branch compost cutinase variant LCC ICCG_RIP
分子名称: 1,2-ETHANEDIOL, IMIDAZOLE, Leaf-branch compost cutinase
著者Niu, D, Zeng, W, Huang, J.W, Chen, C.C, Liu, W.D, Guo, R.T.
登録日2021-11-26
公開日2022-03-09
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Substrate-Binding Mode of a Thermophilic PET Hydrolase and Engineering the Enzyme to Enhance the Hydrolytic Efficacy.
Acs Catalysis, 12, 2022
7W2B
DownloadVisualize
BU of 7w2b by Molmil
The closed conformation of the sigma-1 receptor from Xenopus laevis
分子名称: GOLD ION, Sigma non-opioid intracellular receptor 1, octyl beta-D-glucopyranoside
著者Meng, F, Sun, Z, Zhou, X.
登録日2021-11-23
公開日2022-03-16
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (3.203 Å)
主引用文献An open-like conformation of the sigma-1 receptor reveals its ligand entry pathway.
Nat Commun, 13, 2022
7W45
DownloadVisualize
BU of 7w45 by Molmil
Complex structure of a leaf-branch compost cutinase variant LCC ICCG_KIP
分子名称: CALCIUM ION, Leaf-branch compost cutinase, SODIUM ION
著者Niu, D, Zeng, W, Huang, J.W, Chen, C.C, Liu, W.D, Guo, R.T.
登録日2021-11-26
公開日2022-03-09
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.94 Å)
主引用文献Substrate-Binding Mode of a Thermophilic PET Hydrolase and Engineering the Enzyme to Enhance the Hydrolytic Efficacy.
Acs Catalysis, 12, 2022
7WRK
DownloadVisualize
BU of 7wrk by Molmil
Structure of hypothetical protein TTHA1873 from Thermus thermophilus
分子名称: CALCIUM ION, hypothetical protein TTHA1873
著者Yuvaraj, I, Santosh, K.C, Sekar, K.
登録日2022-01-27
公開日2022-03-09
最終更新日2024-05-29
実験手法X-RAY DIFFRACTION (1.78 Å)
主引用文献Structure of the hypothetical protein TTHA1873 from Thermus thermophilus.
Acta Crystallogr.,Sect.F, 78, 2022

222624

件を2024-07-17に公開中

PDB statisticsPDBj update infoContact PDBjnumon