6W7K
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![BU of 6w7k by Molmil](/molmil-images/mine/6w7k) | Structure of Tdp1 catalytic domain in complex with inhibitor XZ634p | 分子名称: | 1,2-ETHANEDIOL, 4-[(2-phenylimidazo[1,2-a]pyridin-3-yl)amino]benzene-1,2-dicarboxylic acid, Tyrosyl-DNA phosphodiesterase 1 | 著者 | Lountos, G.T, Zhao, X.Z, Kiselev, E, Tropea, J.E, Needle, D, Pommier, Y, Burke, T.R, Waugh, D.S. | 登録日 | 2020-03-19 | 公開日 | 2021-03-24 | 最終更新日 | 2023-10-18 | 実験手法 | X-RAY DIFFRACTION (1.7 Å) | 主引用文献 | Small molecule microarray identifies inhibitors of tyrosyl-DNA phosphodiesterase 1 that simultaneously access the catalytic pocket and two substrate binding sites Chemical Science, 12, 2021
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8P9O
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5Z00
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![BU of 5z00 by Molmil](/molmil-images/mine/5z00) | AtVAL1 B3 domain in complex with 15bp-DNA | 分子名称: | B3 domain-containing transcription repressor VAL1, DNA (5'-D(*AP*AP*TP*TP*CP*TP*GP*CP*AP*TP*GP*GP*AP*TP*T)-3'), DNA (5'-D(*TP*AP*AP*TP*CP*CP*AP*TP*GP*CP*AP*GP*AP*AP*T)-3'), ... | 著者 | Wu, B.X, Zhang, M.M. | 登録日 | 2017-12-17 | 公開日 | 2018-05-02 | 最終更新日 | 2024-03-27 | 実験手法 | X-RAY DIFFRACTION (2.587 Å) | 主引用文献 | Structural insight into the role of VAL1 B3 domain for targeting to FLC locus in Arabidopsis thaliana. Biochem. Biophys. Res. Commun., 2018
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6W7T
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![BU of 6w7t by Molmil](/molmil-images/mine/6w7t) | Structure of PaP3 small terminase | 分子名称: | small terminase subunit | 著者 | Cingolani, G, Lokareddy, R. | 登録日 | 2020-03-19 | 公開日 | 2020-11-11 | 最終更新日 | 2023-10-18 | 実験手法 | X-RAY DIFFRACTION (3.01 Å) | 主引用文献 | Biophysical analysis of Pseudomonas-phage PaP3 small terminase suggests a mechanism for sequence-specific DNA-binding by lateral interdigitation. Nucleic Acids Res., 48, 2020
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6TNG
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6TNI
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1F6O
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![BU of 1f6o by Molmil](/molmil-images/mine/1f6o) | CRYSTAL STRUCTURE OF THE HUMAN AAG DNA REPAIR GLYCOSYLASE COMPLEXED WITH DNA | 分子名称: | 3-METHYL-ADENINE DNA GLYCOSYLASE, DNA (5'-D(*GP*AP*CP*AP*TP*GP*(YRR)P*TP*TP*GP*CP*CP*T)-3'), DNA (5'-D(*GP*GP*CP*AP*AP*TP*CP*AP*TP*GP*TP*CP*A)-3'), ... | 著者 | Lau, A.Y, Wyatt, M.D, Glassner, B.J, Samson, L.D, Ellenberger, T. | 登録日 | 2000-06-22 | 公開日 | 2000-12-11 | 最終更新日 | 2024-02-07 | 実験手法 | X-RAY DIFFRACTION (2.4 Å) | 主引用文献 | Molecular basis for discriminating between normal and damaged bases by the human alkyladenine glycosylase, AAG. Proc.Natl.Acad.Sci.USA, 97, 2000
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5ZCW
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![BU of 5zcw by Molmil](/molmil-images/mine/5zcw) | Structure of the Methanosarcina mazei class II CPD-photolyase in complex with intact, phosphodiester linked, CPD-lesion | 分子名称: | 5'-D(*AP*TP*CP*GP*GP*CP*(TTD)P*CP*GP*CP*GP*CP*AP*A)-3', 5'-D(*TP*GP*CP*GP*CP*GP*AP*AP*GP*CP*CP*GP*AP*T)-3', ACETATE ION, ... | 著者 | Maestre-Reyna, M, Bessho, Y. | 登録日 | 2018-02-21 | 公開日 | 2018-08-22 | 最終更新日 | 2023-11-22 | 実験手法 | X-RAY DIFFRACTION (2.7 Å) | 主引用文献 | Twist and turn: a revised structural view on the unpaired bubble of class II CPD photolyase in complex with damaged DNA. IUCrJ, 5, 2018
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7E1P
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![BU of 7e1p by Molmil](/molmil-images/mine/7e1p) | Crystal structure of Sulfurisphaera tokodaii O6-methylguanine methyltransferase C120S variant in complex with O6-methyldeoxyguanosine | 分子名称: | (2~{R},3~{S},5~{R})-5-(2-azanyl-6-methoxy-purin-9-yl)-2-(hydroxymethyl)oxolan-3-ol, Methylated-DNA--protein-cysteine methyltransferase, SULFATE ION | 著者 | Kikuchi, M, Yamauchi, T, Iizuka, Y, Tsunoda, M. | 登録日 | 2021-02-03 | 公開日 | 2021-12-15 | 最終更新日 | 2023-11-29 | 実験手法 | X-RAY DIFFRACTION (1.63 Å) | 主引用文献 | Roles of the hydroxy group of tyrosine in crystal structures of Sulfurisphaera tokodaii O6-methylguanine-DNA methyltransferase. Acta Crystallogr.,Sect.F, 77, 2021
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7DUV
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![BU of 7duv by Molmil](/molmil-images/mine/7duv) | Structure of Sulfolobus solfataricus SegB protein | 分子名称: | SULFATE ION, SegB | 著者 | Yen, C.Y, Lin, M.G, Sun, Y.J, Hsiao, C.D. | 登録日 | 2021-01-11 | 公開日 | 2021-12-22 | 最終更新日 | 2024-05-29 | 実験手法 | X-RAY DIFFRACTION (3.2 Å) | 主引用文献 | Chromosome segregation in Archaea: SegA- and SegB-DNA complex structures provide insights into segrosome assembly. Nucleic Acids Res., 49, 2021
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7C7Y
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![BU of 7c7y by Molmil](/molmil-images/mine/7c7y) | C-terminal domain of B. cereus TubY | 分子名称: | Uncharacterized protein | 著者 | Hayashi, I. | 登録日 | 2020-05-27 | 公開日 | 2020-10-28 | 最終更新日 | 2021-03-17 | 実験手法 | X-RAY DIFFRACTION (2.6 Å) | 主引用文献 | The C-terminal region of the plasmid partitioning protein TubY is a tetramer that can bind membranes and DNA. J.Biol.Chem., 295, 2020
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1D8Y
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![BU of 1d8y by Molmil](/molmil-images/mine/1d8y) | CRYSTAL STRUCTURE OF THE COMPLEX OF DNA POLYMERASE I KLENOW FRAGMENT WITH DNA | 分子名称: | D(T)19 OLIGOMER, DNA POLYMERASE I, SULFATE ION, ... | 著者 | Teplova, M, Wallace, S.T, Tereshko, V, Minasov, G, Simons, A.M, Cook, P.D, Manoharan, M, Egli, M. | 登録日 | 1999-10-26 | 公開日 | 1999-12-02 | 最終更新日 | 2024-02-07 | 実験手法 | X-RAY DIFFRACTION (2.08 Å) | 主引用文献 | Structural origins of the exonuclease resistance of a zwitterionic RNA. Proc.Natl.Acad.Sci.USA, 96, 1999
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7DQQ
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![BU of 7dqq by Molmil](/molmil-images/mine/7dqq) | Crystal structure of Sulfurisphaera tokodaii O6-methylguanine methyltransferase Y91F/C120S variant in complex with O6-methyldeoxyguanosine | 分子名称: | (2~{R},3~{S},5~{R})-5-(2-azanyl-6-methoxy-purin-9-yl)-2-(hydroxymethyl)oxolan-3-ol, Methylated-DNA--protein-cysteine methyltransferase | 著者 | Kikuchi, M, Yamauchi, T, Iizuka, Y, Tsunoda, M. | 登録日 | 2020-12-24 | 公開日 | 2021-12-15 | 最終更新日 | 2023-11-29 | 実験手法 | X-RAY DIFFRACTION (2.6 Å) | 主引用文献 | Roles of the hydroxy group of tyrosine in crystal structures of Sulfurisphaera tokodaii O6-methylguanine-DNA methyltransferase. Acta Crystallogr.,Sect.F, 77, 2021
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1D9D
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![BU of 1d9d by Molmil](/molmil-images/mine/1d9d) | CRYSTALL STRUCTURE OF THE COMPLEX OF DNA POLYMERASE I KLENOW FRAGMENT WITH SHORT DNA FRAGMENT CARRYING 2'-0-AMINOPROPYL-RNA MODIFICATIONS 5'-D(TCG)-AP(AUC)-3' | 分子名称: | 5'-D(*TP*CP*GP)-R(AP*(U31)P*(C31))-3', DNA POLYMERASE I, MAGNESIUM ION, ... | 著者 | Teplova, M, Wallace, S.T, Tereshko, V, Minasov, G, Simons, A.M, Cook, P.D, Manoharan, M, Egli, M. | 登録日 | 1999-10-27 | 公開日 | 1999-12-02 | 最終更新日 | 2024-02-07 | 実験手法 | X-RAY DIFFRACTION (2.18 Å) | 主引用文献 | Structural origins of the exonuclease resistance of a zwitterionic RNA. Proc.Natl.Acad.Sci.USA, 96, 1999
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4JS4
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4JS5
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8RPX
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![BU of 8rpx by Molmil](/molmil-images/mine/8rpx) | NhoI restriction endonuclease in complex with quadruply methylated DNA target | 分子名称: | 1,2-ETHANEDIOL, CALCIUM ION, DNA (5'-D(*CP*TP*GP*(5CM)P*AP*GP*(5CM)P*TP*C)-3'), ... | 著者 | Rafalski, D, Krakowska, K, Gilski, M, Bochtler, M. | 登録日 | 2024-01-17 | 公開日 | 2024-07-17 | 最終更新日 | 2024-09-04 | 実験手法 | X-RAY DIFFRACTION (1.81 Å) | 主引用文献 | Structural analysis of the BisI family of modification dependent restriction endonucleases. Nucleic Acids Res., 52, 2024
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8T5Y
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8HCC
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![BU of 8hcc by Molmil](/molmil-images/mine/8hcc) | Crystal structure of mTREX1-RNA product complex (AMP) | 分子名称: | ADENOSINE MONOPHOSPHATE, MAGNESIUM ION, SODIUM ION, ... | 著者 | Hsiao, Y.Y, Huang, K.W, Wu, C.Y. | 登録日 | 2022-11-01 | 公開日 | 2023-11-08 | 最終更新日 | 2023-12-13 | 実験手法 | X-RAY DIFFRACTION (2 Å) | 主引用文献 | Molecular insight into the specific enzymatic properties of TREX1 revealing the diverse functions in processing RNA and DNA/RNA hybrids. Nucleic Acids Res., 51, 2023
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1EXQ
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![BU of 1exq by Molmil](/molmil-images/mine/1exq) | CRYSTAL STRUCTURE OF THE HIV-1 INTEGRASE CATALYTIC CORE DOMAIN | 分子名称: | CADMIUM ION, CHLORIDE ION, POL POLYPROTEIN, ... | 著者 | Chen, J.C.-H, Krucinski, J, Miercke, L.J.W, Finer-Moore, J.S, Tang, A.H, Leavitt, A.D, Stroud, R.M. | 登録日 | 2000-05-03 | 公開日 | 2000-11-03 | 最終更新日 | 2024-02-07 | 実験手法 | X-RAY DIFFRACTION (1.6 Å) | 主引用文献 | Crystal structure of the HIV-1 integrase catalytic core and C-terminal domains: a model for viral DNA binding. Proc.Natl.Acad.Sci.USA, 97, 2000
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3VGZ
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![BU of 3vgz by Molmil](/molmil-images/mine/3vgz) | Crystal structure of E. coli YncE | 分子名称: | Uncharacterized protein YncE | 著者 | Kagawa, W, Sagawa, T, Niki, H, Kurumizaka, H. | 登録日 | 2011-08-23 | 公開日 | 2011-11-16 | 最終更新日 | 2011-12-14 | 実験手法 | X-RAY DIFFRACTION (1.7 Å) | 主引用文献 | Structural basis for the DNA-binding activity of the bacterial beta-propeller protein YncE Acta Crystallogr.,Sect.D, 67, 2011
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8IIO
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![BU of 8iio by Molmil](/molmil-images/mine/8iio) | H109Q mutant of uracil DNA glycosylase X | 分子名称: | GLYCEROL, IRON/SULFUR CLUSTER, Type-4 uracil-DNA glycosylase | 著者 | Aroli, S. | 登録日 | 2023-02-24 | 公開日 | 2023-06-21 | 最終更新日 | 2024-05-29 | 実験手法 | X-RAY DIFFRACTION (1.67 Å) | 主引用文献 | Mutational and structural analyses of UdgX: insights into the active site pocket architecture and its evolution. Nucleic Acids Res., 51, 2023
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8IIM
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![BU of 8iim by Molmil](/molmil-images/mine/8iim) | H109K mutant of uracil DNA glycosylase X | 分子名称: | BETA-MERCAPTOETHANOL, IRON/SULFUR CLUSTER, Type-4 uracil-DNA glycosylase | 著者 | Aroli, S. | 登録日 | 2023-02-24 | 公開日 | 2023-06-21 | 最終更新日 | 2024-05-29 | 実験手法 | X-RAY DIFFRACTION (1.6 Å) | 主引用文献 | Mutational and structural analyses of UdgX: insights into the active site pocket architecture and its evolution. Nucleic Acids Res., 51, 2023
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8IIT
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8IIH
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![BU of 8iih by Molmil](/molmil-images/mine/8iih) | H109C mutant of uracil DNA glycosylase X | 分子名称: | IRON/SULFUR CLUSTER, Type-4 uracil-DNA glycosylase | 著者 | Aroli, S. | 登録日 | 2023-02-24 | 公開日 | 2023-06-21 | 最終更新日 | 2024-05-29 | 実験手法 | X-RAY DIFFRACTION (2.13 Å) | 主引用文献 | Mutational and structural analyses of UdgX: insights into the active site pocket architecture and its evolution. Nucleic Acids Res., 51, 2023
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