PDB: 226262 件ウェブページステータス検索Chemie searchBIRD

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1IVV	Crystal structure of copper amine oxidase from Arthrobacter globiformis: Early intermediate in topaquinone biogenesis 分子名称: COPPER (II) ION, amine oxidase 著者 Kim, M, Okajima, T, Kishishita, S, Yoshimura, M, Kawamori, A, Tanizawa, K, Yamaguchi, H. 登録日 2002-03-29 公開日 2002-08-07 最終更新日 2023-12-27 実験手法 X-RAY DIFFRACTION (2.1 Å) 主引用文献 X-ray snapshots of quinone cofactor biogenesis in bacterial copper amine oxidase. Nat.Struct.Biol., 9, 2002
8H72	Class I sesquiterpene synthase DbPROS (complex) 分子名称: Delta(6)-protoilludene synthase K435DRAFT_659367, MAGNESIUM ION, N-benzyl-N,N-diethylethanaminium 著者 Lou, T.T, Ma, M. 登録日 2022-10-18 公開日 2023-08-23 実験手法 X-RAY DIFFRACTION (2.09 Å) 主引用文献 Structural Insights into Three Sesquiterpene Synthases for the Biosynthesis of Tricyclic Sesquiterpenes and Chemical Space Expansion by Structure-Based Mutagenesis. J.Am.Chem.Soc., 2023
2RK9	The crystal structure of a glyoxalase/bleomycin resistance protein/dioxygenase superfamily member from Vibrio splendidus 12B01 分子名称: Glyoxalase/bleomycin resistance protein/dioxygenase 著者 Tyagi, R, Eswaramoorthy, S, Sauder, J.M, Burley, S.K, Swaminathan, S, New York SGX Research Center for Structural Genomics (NYSGXRC) 登録日 2007-10-16 公開日 2007-10-30 最終更新日 2021-10-20 実験手法 X-RAY DIFFRACTION (1.6 Å) 主引用文献 The crystal structure of a glyoxalase/bleomycin resistance protein/dioxygenase superfamily member from Vibrio splendidus 12B01. To be Published
1IWH	Crystal Structure of Horse Carbonmonoxyhemoglobin-Bezafibrate Complex at 1.55A Resolution: A Novel Allosteric Binding Site in R-State Hemoglobin 分子名称: 2-[P-[2-P-CHLOROBENZAMIDO)ETHYL]PHENOXY]-2-METHYLPROPIONIC ACID, CARBON MONOXIDE, Hemoglobin alpha chain, ... 著者 Shibayama, N, Miura, S, Tame, J.R.H, Yonetani, T, Park, S.-Y. 登録日 2002-05-15 公開日 2002-10-02 最終更新日 2023-12-27 実験手法 X-RAY DIFFRACTION (1.55 Å) 主引用文献 Crystal Structure of Horse Carbonmonoxyhemoglobin-Bezafibrate Complex at 1.55A Resolution. A Novel Allosteric Binding Site in R-State Hemoglobin J.BIOL.CHEM., 277, 2002
8H4P	class I sesquiterpene synthase 分子名称: Longiborneol synthase CLM1, MAGNESIUM ION, N-benzyl-N,N-diethylethanaminium, ... 著者 Li, A.N, Lou, T.T, Ma, M. 登録日 2022-10-11 公開日 2023-08-23 実験手法 X-RAY DIFFRACTION (1.47 Å) 主引用文献 Structural Insights into Three Sesquiterpene Synthases for the Biosynthesis of Tricyclic Sesquiterpenes and Chemical Space Expansion by Structure-Based Mutagenesis. J.Am.Chem.Soc., 2023
2RVQ	Solution structure of the isolated histone H2A-H2B heterodimer 分子名称: Histone H2A type 1-B/E, Histone H2B type 1-J 著者 Moriwaki, Y, Yamane, T, Ohtomo, H, Ikeguchi, M, Kurita, J, Sato, M, Nagadoi, A, Shimojo, H, Nishimura, Y. 登録日 2016-03-28 公開日 2016-05-25 最終更新日 2024-05-01 実験手法 SOLUTION NMR 主引用文献 Solution structure of the isolated histone H2A-H2B heterodimer Sci Rep, 6, 2016
1IVU	Crystal structure of copper amine oxidase from Arthrobacter globiformis: Initial intermediate in topaquinone biogenesis 分子名称: COPPER (II) ION, amine oxidase 著者 Kim, M, Okajima, T, Kishishita, S, Yoshimura, M, Kawamori, A, Tanizawa, K, Yamaguchi, H. 登録日 2002-03-29 公開日 2002-08-07 最終更新日 2023-12-27 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 X-ray snapshots of quinone cofactor biogenesis in bacterial copper amine oxidase. Nat.Struct.Biol., 9, 2002
8H0B	Structure of the thermolabile hemolysin from Vibrio alginolyticus (in complex with oleic acid) 分子名称: MAGNESIUM ION, OLEIC ACID, PENTAETHYLENE GLYCOL, ... 著者 Ma, Q, Wang, C. 登録日 2022-09-28 公開日 2023-08-16 実験手法 X-RAY DIFFRACTION (1.931 Å) 主引用文献 Catalytic site flexibility facilitates the substrate and catalytic promiscuity of Vibrio dual lipase/transferase. Nat Commun, 14, 2023
2RLJ	NMR Structure of Ebola fusion peptide in SDS micelles at pH 7 分子名称: Envelope glycoprotein 著者 Freitas, M.S, Gaspar, L.P, Lorenzoni, M, Almeida, F.C, Tinoco, L.W, Almeida, M.S, Maia, L.F, Degreve, L, Valente, A.P, Silva, J.L. 登録日 2007-07-05 公開日 2007-08-07 最終更新日 2024-05-29 実験手法 SOLUTION NMR 主引用文献 Structure of the Ebola fusion peptide in a membrane-mimetic environment and the interaction with lipid rafts. J.Biol.Chem., 282, 2007
2RM8	The solution structure of phototactic transducer protein HtrII linker region from Natronomonas pharaonis 分子名称: Sensory rhodopsin II transducer 著者 Hayashi, K, Sudo, Y, Jee, J, Mishima, M, Hara, H, Kamo, N, Kojima, C. 登録日 2007-10-15 公開日 2007-12-04 最終更新日 2024-05-29 実験手法 SOLUTION NMR 主引用文献 Structural Analysis of the Phototactic Transducer Protein HtrII Linker Region from Natronomonas pharaonis Biochemistry, 46, 2007
1IX8	Aspartate Aminotransferase Active Site Mutant V39F/N194A 分子名称: Aspartate Aminotransferase, PYRIDOXAL-5'-PHOSPHATE 著者 Hayashi, H, Mizuguchi, H, Miyahara, I, Nakajima, Y, Hirotsu, K, Kagamiyama, H. 登録日 2002-06-14 公開日 2002-07-03 最終更新日 2023-12-27 実験手法 X-RAY DIFFRACTION (2.2 Å) 主引用文献 Conformational change in aspartate aminotransferase on substrate binding induces strain in the catalytic group and enhances catalysis J.BIOL.CHEM., 278, 2003
6A64	Placental protein 13/galectin-13 variant R53HR55NH57RD33G with Lactose 分子名称: Galactoside-binding soluble lectin 13, beta-D-galactopyranose-(1-4)-beta-D-glucopyranose 著者 Su, J. 登録日 2018-06-26 公開日 2018-12-26 最終更新日 2020-07-29 実験手法 X-RAY DIFFRACTION (1.63 Å) 主引用文献 Resetting the ligand binding site of placental protein 13/galectin-13 recovers its ability to bind lactose Biosci. Rep., 38, 2018
2RMJ	Solution structure of RIG-I C-terminal domain 分子名称: Probable ATP-dependent RNA helicase DDX58 著者 Takahasi, K, Yoneyama, M, Nihishori, T, Hirai, R, Narita, R, Gale Jr, M, Fujita, T, Inagaki, F. 登録日 2007-10-23 公開日 2008-03-25 最終更新日 2024-05-29 実験手法 SOLUTION NMR 主引用文献 Nonself RNA-Sensing Mechanism of RIG-I Helicase and Activation of Antiviral Immune Responses Mol.Cell, 29, 2008
8H0C	Structure of the thermolabile hemolysin from Vibrio alginolyticus (in complex with arachidonic acid) 分子名称: 3-PYRIDINIUM-1-YLPROPANE-1-SULFONATE, ARACHIDONIC ACID, MAGNESIUM ION, ... 著者 Ma, Q, Wang, C. 登録日 2022-09-28 公開日 2023-08-16 実験手法 X-RAY DIFFRACTION (1.98 Å) 主引用文献 Catalytic site flexibility facilitates the substrate and catalytic promiscuity of Vibrio dual lipase/transferase. Nat Commun, 14, 2023
2RO5	RDC-refined solution structure of the N-terminal DNA recognition domain of the Bacillus subtilis transition-state regulator SpoVT 分子名称: Stage V sporulation protein T 著者 Sullivan, D.M, Bobay, B.G, Kojetin, D.J, Thompson, R.J, Rance, M, Strauch, M.A, Cavanagh, J. 登録日 2008-03-08 公開日 2008-11-11 最終更新日 2024-05-01 実験手法 SOLUTION NMR 主引用文献 Insights into the nature of DNA binding of AbrB-like transcription factors Structure, 16, 2008
2RPA	The solution structure of N-terminal domain of microtubule severing enzyme 分子名称: Katanin p60 ATPase-containing subunit A1 著者 Iwaya, N, Kuwahara, Y, Unzai, S, Nagata, T, Tomii, K, Goda, N, Tochio, H, Shirakawa, M, Hiroaki, H. 登録日 2008-05-13 公開日 2009-05-26 最終更新日 2024-05-29 実験手法 SOLUTION NMR 主引用文献 A common substrate recognition mode conserved between katanin P60 and VPS4 governs microtubule severing and membrane skeleton reorganization J.Biol.Chem., 285, 2010
8H0A	Structure of the thermolabile hemolysin from Vibrio alginolyticus (in complex with lauric acid) 分子名称: DI(HYDROXYETHYL)ETHER, LAURIC ACID, MAGNESIUM ION, ... 著者 Ma, Q, Wang, C. 登録日 2022-09-28 公開日 2023-08-16 実験手法 X-RAY DIFFRACTION (1.94 Å) 主引用文献 Catalytic site flexibility facilitates the substrate and catalytic promiscuity of Vibrio dual lipase/transferase. Nat Commun, 14, 2023
2RPR	Solution structure of the fifth FLYWCH domain of FLYWCH-type zinc finger-containing protein 1 分子名称: FLYWCH-type zinc finger-containing protein 1, ZINC ION 著者 Enomoto, M, Saito, K, Tochio, N, Kigawa, T, Yokoyama, S, Nameki, N. 登録日 2008-07-24 公開日 2009-08-04 最終更新日 2024-05-29 実験手法 SOLUTION NMR 主引用文献 Solution structure of the fifth FLYWCH domain of FLYWCH-type zinc finger-containing protein 1 To be Published
2RQ6	Solution structure of the epsilon subunit of the F1-atpase from thermosynechococcus elongatus BP-1 分子名称: ATP synthase epsilon chain 著者 Yagi, H, Konno, H, Murakami-Fuse, T, Oroguchi, H, Akutsu, T, Ikeguchi, M, Hisabori, T. 登録日 2009-03-03 公開日 2010-01-12 最終更新日 2024-05-29 実験手法 SOLUTION NMR 主引用文献 Structural and functional analysis of the intrinsic inhibitor subunit epsilon of F1-ATPase from photosynthetic organisms. Biochem.J., 425, 2010
2RQM	NMR Solution Structure of Mesoderm Development (MESD) - open conformation 分子名称: Mesoderm development candidate 2 著者 Koehler, C, Lighthouse, J.K, Werther, T, Andersen, O.M, Diehl, A, Schmieder, P, Holdener, B.C, Oschkinat, H. 登録日 2009-08-14 公開日 2009-08-25 最終更新日 2024-05-01 実験手法 SOLUTION NMR 主引用文献 The Structure of MESD45-184 Brings Light into the Mechanism of LDLR Family Folding Structure, 19, 2011
2RR6	Solution structure of the leucine rich repeat of human acidic leucine-rich nuclear phosphoprotein 32 family member B 分子名称: Acidic leucine-rich nuclear phosphoprotein 32 family member B 著者 Tochio, N, Umehara, T, Tsuda, K, Koshiba, S, Harada, T, Watanabe, S, Tanaka, A, Kigawa, T, Yokoyama, S. 登録日 2010-05-25 公開日 2010-06-09 最終更新日 2024-05-01 実験手法 SOLUTION NMR 主引用文献 Solution structure of histone chaperone ANP32B: interaction with core histones H3-H4 through its acidic concave domain. J.Mol.Biol., 401, 2010
2TLI	THERMOLYSIN (5% ISOPROPANOL SOAKED CRYSTALS) 分子名称: CALCIUM ION, DIMETHYL SULFOXIDE, ISOPROPYL ALCOHOL, ... 著者 English, A.C, Done, S.H, Groom, C.R, Hubbard, R.E. 登録日 1998-10-28 公開日 2000-02-18 最終更新日 2024-02-21 実験手法 X-RAY DIFFRACTION (1.95 Å) 主引用文献 Locating interaction sites on proteins: the crystal structure of thermolysin soaked in 2% to 100% isopropanol. Proteins, 37, 1999
2RVC	Solution structure of Zalpha domain of goldfish ZBP-containing protein kinase 分子名称: Interferon-inducible and double-stranded-dependent eIF-2kinase 著者 Lee, A, Park, C, Park, J, Kwon, M, Choi, Y, Kim, K, Choi, B, Lee, J. 登録日 2015-07-08 公開日 2016-02-03 最終更新日 2024-05-01 実験手法 SOLUTION NMR 主引用文献 Solution structure of the Z-DNA binding domain of PKR-like protein kinase from Carassius auratus and quantitative analyses of the intermediate complex during B-Z transition. Nucleic Acids Res., 44, 2016
1J2U	Creatininase Zn 分子名称: SULFATE ION, ZINC ION, creatinine amidohydrolase 著者 Yoshimoto, T, Tanaka, N, Kanada, N, Inoue, T, Nakajima, Y, Haratake, M, Nakamura, K.T, Xu, Y, Ito, K. 登録日 2003-01-11 公開日 2004-01-27 最終更新日 2023-12-27 実験手法 X-RAY DIFFRACTION (1.85 Å) 主引用文献 Crystal structures of creatininase reveal the substrate binding site and provide an insight into the catalytic mechanism J.Mol.Biol., 337, 2004
8HG0	Cryo-EM structure of SARS-CoV-2 prototype spike protein receptor-binding domain in complex with white-tailed deer ACE2 分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Angiotensin-converting enzyme, Spike protein S1, ... 著者 Han, P, Meng, Y.M, Qi, J.X. 登録日 2022-11-13 公開日 2023-08-30 最終更新日 2024-10-09 実験手法 ELECTRON MICROSCOPY (3.51 Å) 主引用文献 Structural basis of white-tailed deer, Odocoileus virginianus , ACE2 recognizing all the SARS-CoV-2 variants of concern with high affinity. J.Virol., 97, 2023

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