PDB: 97814 件ウェブページステータス検索Chemie searchBIRD

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7TLX	Crystal Structure of cytochrome c from Pseudomonas putida S16 分子名称: C-type cytochrome, HEME C 著者 Wu, K, Dulchavsky, M, Stull, F, Bardwell, J.C.A. 登録日 2022-01-19 公開日 2022-04-06 最終更新日 2023-10-18 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 The enzyme pseudooxynicotine amine oxidase from Pseudomonas putida S16 is not an oxidase, but a dehydrogenase. J.Biol.Chem., 298, 2022
2X68	The ternary complex of PrnB (the second enzyme in pyrrolnitrin biosynthesis pathway), 7-Cl-L-tryptophan and cyanide 分子名称: 7-CHLOROTRYPTOPHAN, CYANIDE ION, PRNB, ... 著者 Zhu, X, van pee, K.-H, Naismith, J.H. 登録日 2010-02-15 公開日 2010-03-02 最終更新日 2023-12-20 実験手法 X-RAY DIFFRACTION (2.13 Å) 主引用文献 The Ternary Complex of Prnb (the Second Enzyme in Pyrrolnitrin Biosynthesis Pathway), Tryptophan and Cyanide Yields New Mechanistic Insights Into the Indolamine Dioxygenase Superfamily. J.Biol.Chem., 285, 2010
4FL4	Scaffoldin conformation and dynamics revealed by a ternary complex from the Clostridium thermocellum cellulosome 分子名称: CALCIUM ION, Cellulosome anchoring protein cohesin region, Glycoside hydrolase family 9, ... 著者 Currie, M.A, Adams, J.J, Faucher, F, Bayer, E.A, Jia, Z, Smith, S.P, Montreal-Kingston Bacterial Structural Genomics Initiative (BSGI) 登録日 2012-06-14 公開日 2012-06-27 最終更新日 2024-02-28 実験手法 X-RAY DIFFRACTION (2.8 Å) 主引用文献 Scaffoldin Conformation and Dynamics Revealed by a Ternary Complex from the Clostridium thermocellum Cellulosome. J.Biol.Chem., 287, 2012
2X67	The ternary complex of PrnB (the second enzyme in pyrrolnitrin biosynthesis pathway), tryptophan and cyanide 分子名称: CYANIDE ION, PRNB, PROTOPORPHYRIN IX CONTAINING FE, ... 著者 Zhu, X, van pee, K.-H, Naismith, J.H. 登録日 2010-02-15 公開日 2010-03-02 最終更新日 2023-12-20 実験手法 X-RAY DIFFRACTION (2.16 Å) 主引用文献 The Ternary Complex of Prnb (the Second Enzyme in Pyrrolnitrin Biosynthesis Pathway), Tryptophan and Cyanide Yields New Mechanistic Insights Into the Indolamine Dioxygenase Superfamily. J.Biol.Chem., 285, 2010
4KI5	Cystal structure of human factor VIII C2 domain in a ternary complex with murine inhbitory antibodies 3E6 and G99 分子名称: Coagulation factor VIII, MURINE MONOCLONAL 3E6 FAB HEAVY CHAIN, MURINE MONOCLONAL 3E6 FAB LIGHT CHAIN, ... 著者 Walter, J.D, Meeks, S.L, Healey, J.F, Lollar, P, Spiegel, P.C. 登録日 2013-05-01 公開日 2014-01-15 実験手法 X-RAY DIFFRACTION (2.47 Å) 主引用文献 Structure of the factor VIII C2 domain in a ternary complex with 2 inhibitor antibodies reveals classical and nonclassical epitopes. Blood, 122, 2013
3QEP	RB69 DNA Polymerase (L561A/S565G/Y567A) Ternary Complex with dTTP Opposite Difluorotoluene Nucleoside 分子名称: CALCIUM ION, DNA (5'-D(*GP*CP*GP*GP*AP*CP*TP*GP*CP*TP*TP*AP*(DOC))-3'), DNA (5'-D(*TP*CP*GP*(DFT)P*GP*TP*AP*AP*GP*CP*AP*GP*TP*CP*CP*GP*CP*G)-3'), ... 著者 Xia, S, Konigsberg, W.H, Wang, J. 登録日 2011-01-20 公開日 2011-08-31 最終更新日 2024-02-21 実験手法 X-RAY DIFFRACTION (1.8 Å) 主引用文献 Hydrogen-bonding capability of a templating difluorotoluene nucleotide residue in an RB69 DNA polymerase ternary complex. J.Am.Chem.Soc., 133, 2011
4I3Y	Crystal structure of Staphylococcal inositol monophosphatase-1: 100 mM LiCl soaked inhibitory complex 分子名称: GLYCEROL, Inositol monophosphatase family protein, MAGNESIUM ION, ... 著者 Dutta, A, Bhattacharyya, S, Dutta, D, Das, A.K. 登録日 2012-11-26 公開日 2013-11-27 最終更新日 2023-11-08 実験手法 X-RAY DIFFRACTION (2.04 Å) 主引用文献 Structural elucidation of the binding site and mode of inhibition of Li(+) and Mg(2+) in inositol monophosphatase. Febs J., 281, 2014
6DFR	CRYSTAL STRUCTURES OF ESCHERICHIA COLI DIHYDROFOLATE REDUCTASE. THE NADP+ HOLOENZYME AND THE FOLATE(DOT)NADP+ TERNARY COMPLEX. SUBSTRATE BINDING AND A MODEL FOR THE TRANSITION STATE 分子名称: CALCIUM ION, DIHYDROFOLATE REDUCTASE, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE 著者 Bystroff, C, Oatley, S.J, Kraut, J. 登録日 1988-10-21 公開日 1990-07-15 最終更新日 2024-03-13 実験手法 X-RAY DIFFRACTION (2.4 Å) 主引用文献 Crystal structures of Escherichia coli dihydrofolate reductase: the NADP+ holoenzyme and the folate.NADP+ ternary complex. Substrate binding and a model for the transition state. Biochemistry, 29, 1990
8JKZ	Cryo-EM structure of the prokaryotic SPARSA system complex 分子名称: NICOTINAMIDE-ADENINE-DINUCLEOTIDE, Piwi domain protein, Sir2 superfamily protein 著者 Xu, X, Zhen, X, Long, F. 登録日 2023-06-02 公開日 2024-01-24 実験手法 ELECTRON MICROSCOPY (3.6 Å) 主引用文献 Structural basis of antiphage immunity generated by a prokaryotic Argonaute-associated SPARSA system. Nat Commun, 15, 2024
8JL0	Cryo-EM structure of the prokaryotic SPARSA system complex 分子名称: DNA (5'-D(P*AP*CP*GP*AP*CP*GP*TP*CP*TP*AP*AP*GP*AP*AP*AP*CP*CP*AP*TP*TP*AP*T)-3'), NICOTINAMIDE-ADENINE-DINUCLEOTIDE, Piwi domain protein, ... 著者 Xu, X, Zhen, X, Long, F. 登録日 2023-06-02 公開日 2024-01-24 実験手法 ELECTRON MICROSCOPY (3.1 Å) 主引用文献 Structural basis of antiphage immunity generated by a prokaryotic Argonaute-associated SPARSA system. Nat Commun, 15, 2024
2ANG	CRYSTAL STRUCTURE OF HUMAN ANGIOGENIN OF THE MET(-1) FORM 分子名称: ANGIOGENIN, CITRIC ACID 著者 Leonidas, D.D, Allen, S.C, Acharya, K.R. 登録日 1998-11-12 公開日 1999-04-02 最終更新日 2023-08-23 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Refined crystal structures of native human angiogenin and two active site variants: implications for the unique functional properties of an enzyme involved in neovascularisation during tumour growth. J.Mol.Biol., 285, 1999
4DRW	Crystal Structure of the Ternary Complex between S100A10, an Annexin A2 N-terminal Peptide and an AHNAK Peptide 分子名称: Neuroblast differentiation-associated protein AHNAK, Protein S100-A10/Annexin A2 chimeric protein 著者 Rezvanpour, A, Lee, T.-W, Junop, M.S, Shaw, G.S. 登録日 2012-02-17 公開日 2012-10-24 最終更新日 2023-09-13 実験手法 X-RAY DIFFRACTION (3.5 Å) 主引用文献 Structure of an asymmetric ternary protein complex provides insight for membrane interaction. Structure, 20, 2012
5XEP	Crystal structure of BRP39, a chitinase-like protein, at 2.6 Angstorm resolution 分子名称: 1,2-ETHANEDIOL, Chitinase-3-like protein 1 著者 Mohanty, A.K, Fisher, A.J, Choudhary, S, Kaushik, J.K. 登録日 2017-04-05 公開日 2018-04-11 最終更新日 2023-11-22 実験手法 X-RAY DIFFRACTION (2.6 Å) 主引用文献 Crystal Structure of BRP39, a signalling glycoprotein expressed during mammary gland apoptosis. To be published
8QLP	CryoEM structure of the RNA/DNA bound SPARTA (BabAgo/TIR-APAZ) tetrameric complex 分子名称: DNA (5'-D(*AP*CP*TP*AP*AP*TP*AP*GP*AP*TP*TP*AP*GP*AP*GP*CP*CP*GP*TP*C)-3'), MAGNESIUM ION, RNA (5'-R(*AP*UP*GP*AP*CP*GP*GP*CP*UP*CP*UP*AP*AP*UP*CP*UP*AP*UP*UP*AP*GP*U)-3'), ... 著者 Finocchio, G, Koopal, B, Potocnik, A, Heijstek, C, Jinek, M, Swarts, D. 登録日 2023-09-20 公開日 2024-01-31 最終更新日 2024-03-06 実験手法 ELECTRON MICROSCOPY (3.14 Å) 主引用文献 Target DNA-dependent activation mechanism of the prokaryotic immune system SPARTA. Nucleic Acids Res., 52, 2024
8QLO	CryoEM structure of the apo SPARTA (BabAgo/TIR-APAZ) complex 分子名称: Short prokaryotic Argonaute, Toll/interleukin-1 receptor domain-containing protein 著者 Finocchio, G, Koopal, B, Potocnik, A, Heijstek, C, Jinek, M, Swarts, D. 登録日 2023-09-20 公開日 2024-01-31 最終更新日 2024-03-06 実験手法 ELECTRON MICROSCOPY (2.57 Å) 主引用文献 Target DNA-dependent activation mechanism of the prokaryotic immune system SPARTA. Nucleic Acids Res., 52, 2024
6N4O	Human Argonaute2-miR-122 bound to a seed and supplementary paired target 分子名称: Protein argonaute-2, RNA (5'-R(*CP*CP*AP*UP*UP*GP*UP*CP*AP*CP*AP*CP*UP*CP*CP*AP*AP*A)-3'), RNA (5'-R(P*UP*GP*GP*AP*GP*UP*GP*UP*GP*AP*CP*AP*AP*UP*GP*GP*UP*GP*UP*UP*U)-3') 著者 Sheu-Gruttadauria, J, MacRae, I.J. 登録日 2018-11-19 公開日 2019-05-08 最終更新日 2023-10-11 実験手法 X-RAY DIFFRACTION (2.899 Å) 主引用文献 Beyond the seed: structural basis for supplementary microRNA targeting by human Argonaute2. Embo J., 38, 2019
9J7T	De Novo Designed Cell-Penetrating Peptide Self-Assembly Featuring Distinctive Tertiary Structure 分子名称: GLYCEROL, LKa14 著者 Park, J, Hyun, S, Lee, S.J. 登録日 2024-08-19 公開日 2024-09-04 実験手法 X-RAY DIFFRACTION (1.92 Å) 主引用文献 De Novo Designed Cell-Penetrating Peptide Self-Assembly Featuring Distinctive Tertiary Structure Acs Omega, 9, 2024
4WHB	Crystal structure of phenylurea hydrolase B 分子名称: Phenylurea hydrolase B, ZINC ION 著者 Sugrue, E, Carr, P.D, Khurana, J.L, Jackson, C.J. 登録日 2014-09-21 公開日 2015-02-11 最終更新日 2023-09-27 実験手法 X-RAY DIFFRACTION (2.958 Å) 主引用文献 Evolutionary Expansion of the Amidohydrolase Superfamily in Bacteria in Response to the Synthetic Compounds Molinate and Diuron. Appl.Environ.Microbiol., 81, 2015
4WL1	Structure of WzzE Polysaccharide Co-polymerase 分子名称: Lipopolysaccharide biosynthesis protein WzzE 著者 Kalynych, S, Cherney, M, Cygler, M. 登録日 2014-10-05 公開日 2014-10-29 最終更新日 2023-09-27 実験手法 X-RAY DIFFRACTION (5.989 Å) 主引用文献 Quaternary structure of WzzB and WzzE polysaccharide copolymerases. Protein Sci., 24, 2015
4WGX	Crystal Structure of Molinate Hydrolase 分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, COBALT (II) ION, Molinate hydrolase 著者 Sugrue, E, Carr, P.D, Fraser, N.J, Hopkins, D.H, Jackson, C.J. 登録日 2014-09-19 公開日 2015-02-11 最終更新日 2023-12-27 実験手法 X-RAY DIFFRACTION (2.29 Å) 主引用文献 Evolutionary Expansion of the Amidohydrolase Superfamily in Bacteria in Response to the Synthetic Compounds Molinate and Diuron. Appl.Environ.Microbiol., 81, 2015
6AR5	Structure of a Thermostable Group II Intron Reverse Transcriptase with Template-Primer and Its Functional and Evolutionary Implications (Duplex Only) 分子名称: DNA, RNA 著者 Stamos, J.L, Lentzsch, A.M, Lambowitz, A.M. 登録日 2017-08-21 公開日 2017-11-29 最終更新日 2024-03-13 実験手法 X-RAY DIFFRACTION (2.413 Å) 主引用文献 Structure of a Thermostable Group II Intron Reverse Transcriptase with Template-Primer and Its Functional and Evolutionary Implications. Mol. Cell, 68, 2017
4AO7	Zinc bound structure of a novel cold-adapted esterase from an Arctic intertidal metagenomic library 分子名称: ESTERASE, ZINC ION 著者 Fu, J, Leiros, H.-K.S, Pascale, D.d, Johnson, K.A, Blencke, H.M, Landfald, B. 登録日 2012-03-23 公開日 2012-08-08 最終更新日 2024-05-08 実験手法 X-RAY DIFFRACTION (1.85 Å) 主引用文献 Functional and Structural Studies of a Novel Cold-Adapted Esterase from an Arctic Intertidal Metagenomic Library. Appl.Microbiol.Biotechnol., 97, 2013
6AR1	Structure of a Thermostable Group II Intron Reverse Transcriptase with Template-Primer and Its Functional and Evolutionary Implications (RT/Duplex (Nat)) 分子名称: 2'-DEOXYADENOSINE 5'-TRIPHOSPHATE, DNA, GsI-IIC RT, ... 著者 Stamos, J.L, Lentzsch, A.M, Lambowitz, A.M. 登録日 2017-08-21 公開日 2017-11-29 最終更新日 2023-10-04 実験手法 X-RAY DIFFRACTION (3.01 Å) 主引用文献 Structure of a Thermostable Group II Intron Reverse Transcriptase with Template-Primer and Its Functional and Evolutionary Implications. Mol. Cell, 68, 2017
4AO6	Native structure of a novel cold-adapted esterase from an Arctic intertidal metagenomic library 分子名称: ESTERASE 著者 Fu, J, Leiros, H.-K.S, Pascale, D.d, Johnson, K.A, Blencke, H.M, Landfald, B. 登録日 2012-03-23 公開日 2012-08-08 最終更新日 2024-05-08 実験手法 X-RAY DIFFRACTION (1.6 Å) 主引用文献 Functional and Structural Studies of a Novel Cold-Adapted Esterase from an Arctic Intertidal Metagenomic Library. Appl.Microbiol.Biotechnol., 97, 2013
6AR3	Structure of a Thermostable Group II Intron Reverse Transcriptase with Template-Primer and Its Functional and Evolutionary Implications (RT/Duplex (Se-Met)) 分子名称: 2'-DEOXYADENOSINE 5'-TRIPHOSPHATE, DNA, GsI-IIC RT, ... 著者 Stamos, J.L, Lentzsch, A.M, Lambowitz, A.M. 登録日 2017-08-21 公開日 2017-11-29 最終更新日 2023-11-15 実験手法 X-RAY DIFFRACTION (3.41 Å) 主引用文献 Structure of a Thermostable Group II Intron Reverse Transcriptase with Template-Primer and Its Functional and Evolutionary Implications. Mol. Cell, 68, 2017

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