Loading
PDBj
メニューPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help

4HDQ
DownloadVisualize
BU of 4hdq by Molmil
Crystal Structure of the Ternary Complex of KRIT1 bound to both the Rap1 GTPase and the Heart of Glass (HEG1) cytoplasmic tail
分子名称: GLYCEROL, Krev interaction trapped protein 1, MAGNESIUM ION, ...
著者Gingras, A.R.
登録日2012-10-02
公開日2013-07-10
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献The Structure of the Ternary Complex of Krev Interaction Trapped 1 (KRIT1) Bound to Both the Rap1 GTPase and the Heart of Glass (HEG1) Cytoplasmic Tail.
J.Biol.Chem., 288, 2013
4HDO
DownloadVisualize
BU of 4hdo by Molmil
Crystal structure of the binary Complex of KRIT1 bound to the Rap1 GTPase
分子名称: GLYCEROL, Krev interaction trapped protein 1, MAGNESIUM ION, ...
著者Gingras, A.R.
登録日2012-10-02
公開日2013-07-10
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.67 Å)
主引用文献The Structure of the Ternary Complex of Krev Interaction Trapped 1 (KRIT1) Bound to Both the Rap1 GTPase and the Heart of Glass (HEG1) Cytoplasmic Tail.
J.Biol.Chem., 288, 2013
4CW5
DownloadVisualize
BU of 4cw5 by Molmil
Crystal structure of the enoyl reductase domain of DfnA from Bacillus amyloliquefaciens
分子名称: DFNA, FLAVIN MONONUCLEOTIDE
著者Jakob, R.P, Buhkari, H.S.T, Maier, T.
登録日2014-04-01
公開日2014-12-17
最終更新日2024-10-23
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Evolutionary Origins of the Multienzyme Architecture of Giant Fungal Fatty Acid Synthase.
Structure, 22, 2014
6RD6
DownloadVisualize
BU of 6rd6 by Molmil
CryoEM structure of Polytomella F-ATP synthase, focussed refinement of upper peripheral stalk
分子名称: ASA-2: Polytomella F-ATP synthase associated subunit 2, ATP synthase subunit alpha, Mitochondrial ATP synthase associated protein ASA4, ...
著者Murphy, B.J, Klusch, N, Yildiz, O, Kuhlbrandt, W.
登録日2019-04-12
公開日2019-07-03
最終更新日2024-05-22
実験手法ELECTRON MICROSCOPY (2.75 Å)
主引用文献Rotary substates of mitochondrial ATP synthase reveal the basis of flexible F 1 -F o coupling.
Science, 364, 2019
6RD8
DownloadVisualize
BU of 6rd8 by Molmil
CryoEM structure of Polytomella F-ATP synthase, c-ring position 2, focussed refinement of Fo and peripheral stalk
分子名称: ASA-10: Polytomella F-ATP synthase associated subunit 10, ASA-9: Polytomella F-ATP synthase associated subunit 9, ATP synthase associated protein ASA1, ...
著者Murphy, B.J, Klusch, N, Yildiz, O, Kuhlbrandt, W.
登録日2019-04-12
公開日2019-07-03
最終更新日2024-10-23
実験手法ELECTRON MICROSCOPY (3.08 Å)
主引用文献Rotary substates of mitochondrial ATP synthase reveal the basis of flexible F 1 -F o coupling.
Science, 364, 2019
1GT8
DownloadVisualize
BU of 1gt8 by Molmil
DIHYDROPYRIMIDINE DEHYDROGENASE (DPD) FROM PIG, TERNARY COMPLEX WITH NADPH AND URACIL-4-ACETIC ACID
分子名称: DIHYDROPYRIMIDINE DEHYDROGENASE, FLAVIN MONONUCLEOTIDE, FLAVIN-ADENINE DINUCLEOTIDE, ...
著者Dobritzsch, D, Ricagno, S, Schneider, G, Schnackerz, K.D, Lindqvist, Y.
登録日2002-01-14
公開日2002-04-11
最終更新日2024-05-01
実験手法X-RAY DIFFRACTION (3.3 Å)
主引用文献Crystal structure of the productive ternary complex of dihydropyrimidine dehydrogenase with NADPH and 5-iodouracil. Implications for mechanism of inhibition and electron transfer.
J. Biol. Chem., 277, 2002
1GTE
DownloadVisualize
BU of 1gte by Molmil
DIHYDROPYRIMIDINE DEHYDROGENASE (DPD) FROM PIG, BINARY COMPLEX WITH 5-IODOURACIL
分子名称: 5-IODOURACIL, DIHYDROPYRIMIDINE DEHYDROGENASE, FLAVIN MONONUCLEOTIDE, ...
著者Dobritzsch, D, Ricagno, S, Schneider, G, Schnackerz, K.D, Lindqvist, Y.
登録日2002-01-15
公開日2002-04-11
最終更新日2024-05-01
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献Crystal structure of the productive ternary complex of dihydropyrimidine dehydrogenase with NADPH and 5-iodouracil. Implications for mechanism of inhibition and electron transfer.
J. Biol. Chem., 277, 2002
6RD4
DownloadVisualize
BU of 6rd4 by Molmil
CryoEM structure of Polytomella F-ATP synthase, Full dimer, composite map
分子名称: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, ASA-10: Polytomella F-ATP synthase associated subunit 10, ...
著者Murphy, B.J, Klusch, N, Yildiz, O, Kuhlbrandt, W.
登録日2019-04-12
公開日2019-07-03
最終更新日2024-05-22
実験手法ELECTRON MICROSCOPY (2.9 Å)
主引用文献Rotary substates of mitochondrial ATP synthase reveal the basis of flexible F 1 -F o coupling.
Science, 364, 2019
6RD7
DownloadVisualize
BU of 6rd7 by Molmil
CryoEM structure of Polytomella F-ATP synthase, c-ring position 1, focussed refinement of Fo and peripheral stalk
分子名称: ASA-10: Polytomella F-ATP synthase associated subunit 10, ASA-9: Polytomella F-ATP synthase associated subunit 9, ATP synthase associated protein ASA1, ...
著者Murphy, B.J, Klusch, N, Yildiz, O, Kuhlbrandt, W.
登録日2019-04-12
公開日2019-07-03
最終更新日2024-11-13
実験手法ELECTRON MICROSCOPY (2.73 Å)
主引用文献Rotary substates of mitochondrial ATP synthase reveal the basis of flexible F 1 -F o coupling.
Science, 364, 2019
6RD5
DownloadVisualize
BU of 6rd5 by Molmil
CryoEM structure of Polytomella F-ATP synthase, focussed refinement of Fo and peripheral stalk, C2 symmetry
分子名称: (1S)-2-{[(2-AMINOETHOXY)(HYDROXY)PHOSPHORYL]OXY}-1-[(PALMITOYLOXY)METHYL]ETHYL STEARATE, ASA-10: Polytomella F-ATP synthase associated subunit 10, ATP synthase associated protein ASA1, ...
著者Murphy, B.J, Klusch, N, Yildiz, O, Kuhlbrandt, W.
登録日2019-04-12
公開日2019-07-03
最終更新日2024-05-22
実験手法ELECTRON MICROSCOPY (2.69 Å)
主引用文献Rotary substates of mitochondrial ATP synthase reveal the basis of flexible F 1 -F o coupling.
Science, 364, 2019
4JTA
DownloadVisualize
BU of 4jta by Molmil
Crystal structure of Kv1.2-2.1 paddle chimera channel in complex with Charybdotoxin
分子名称: (1R)-2-{[(S)-{[(2S)-2,3-dihydroxypropyl]oxy}(hydroxy)phosphoryl]oxy}-1-[(hexadecanoyloxy)methyl]ethyl (9Z)-octadec-9-enoate, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, POTASSIUM ION, ...
著者MacKinnon, R, Banerjee, A, Lee, A, Campbell, E.
登録日2013-03-23
公開日2013-06-12
最終更新日2024-11-27
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Structure of a pore-blocking toxin in complex with a eukaryotic voltage-dependent K(+) channel.
Elife, 2, 2013
5X8U
DownloadVisualize
BU of 5x8u by Molmil
Crystal Structure of the wild Human ROR gamma Ligand Binding Domain.
分子名称: Nuclear receptor ROR-gamma, Nuclear receptor coactivator 1
著者Noguchi, M, Nomura, A, Murase, K, Doi, S, Yamaguchi, K, Adachi, T.
登録日2017-03-03
公開日2017-06-07
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Ternary complex of human ROR gamma ligand-binding domain, inverse agonist and SMRT peptide shows a unique mechanism of corepressor recruitment
Genes Cells, 22, 2017
5X8W
DownloadVisualize
BU of 5x8w by Molmil
Crystal Structure of the mutant Human ROR gamma Ligand Binding Domain.
分子名称: Nuclear receptor ROR-gamma, Nuclear receptor coactivator 1
著者Noguchi, M, Nomura, A, Murase, K, Doi, S, Yamaguchi, K, Adachi, T.
登録日2017-03-03
公開日2017-06-07
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Ternary complex of human ROR gamma ligand-binding domain, inverse agonist and SMRT peptide shows a unique mechanism of corepressor recruitment
Genes Cells, 22, 2017
9B9H
DownloadVisualize
BU of 9b9h by Molmil
Crystal structure of the ternary complex of DCAF1 and WDR5 with PROTAC, OICR-40333
分子名称: DDB1- and CUL4-associated factor 1, N-{(1P)-5'-({(17E)-18-[(3P)-4-{[(1S)-3-amino-1-(3-chloro-4-fluorophenyl)-3-oxopropyl]carbamoyl}-3-(4-chloro-2-fluorophenyl)-1H-pyrrol-2-yl]-16-oxo-3,6,9,12-tetraoxa-15-azaoctadec-17-en-1-yl}carbamoyl)-2'-fluoro-4-[(3R,5S)-3,4,5-trimethylpiperazin-1-yl][1,1'-biphenyl]-3-yl}-6-oxo-4-(trifluoromethyl)-1,6-dihydropyridine-3-carboxamide, WD repeat-containing protein 5
著者Mabanglo, M.F, Wilson, B.J, Alvarez, H.G, Hoffer, L, Al-awar, R, Vedadi, M.
登録日2024-04-02
公開日2024-11-06
最終更新日2024-12-04
実験手法X-RAY DIFFRACTION (2.06 Å)
主引用文献Crystal structures of DCAF1-PROTAC-WDR5 ternary complexes provide insight into DCAF1 substrate specificity.
Nat Commun, 15, 2024
9B9W
DownloadVisualize
BU of 9b9w by Molmil
Crystal structure of the ternary complex of DCAF1 and WDR5 with PROTAC, OICR-40792
分子名称: (4P)-N-[(1R)-3-amino-1-(3-chloro-4-fluorophenyl)-3-oxopropyl]-4-(4-chloro-2-fluorophenyl)-5-[(25E)-1-{(1P)-6-fluoro-3'-[4-fluoro-2-(trifluoromethyl)benzamido]-4'-[(3R,5S)-3,4,5-trimethylpiperazin-1-yl][1,1'-biphenyl]-3-yl}-1,24-dioxo-5,8,11,14,17,20-hexaoxa-2,23-diazahexacos-25-en-26-yl]-1H-pyrrole-3-carboxamide, DDB1- and CUL4-associated factor 1, WD repeat-containing protein 5
著者Mabanglo, M.F, Wilson, B.J, Mamai, A, Hoffer, L, Al-awar, R, Vedadi, M.
登録日2024-04-03
公開日2024-11-06
最終更新日2024-12-04
実験手法X-RAY DIFFRACTION (1.92 Å)
主引用文献Crystal structures of DCAF1-PROTAC-WDR5 ternary complexes provide insight into DCAF1 substrate specificity.
Nat Commun, 15, 2024
9B9T
DownloadVisualize
BU of 9b9t by Molmil
Crystal structure of the ternary complex of DCAF1 and WDR5 with PROTAC, OICR-40407
分子名称: DDB1- and CUL4-associated factor 1, N-{(1P)-5'-[(17-{(4P)-4-[(2P)-4-{[(1R)-3-amino-1-(3-chloro-4-fluorophenyl)-3-oxopropyl]carbamoyl}-3-(4-chloro-2-fluorophenyl)-1H-pyrrol-2-yl]-1H-pyrazol-1-yl}-16-oxo-3,6,9,12-tetraoxa-15-azaheptadecan-1-yl)carbamoyl]-2'-fluoro-4-[(3R,5S)-3,4,5-trimethylpiperazin-1-yl][1,1'-biphenyl]-3-yl}-6-oxo-4-(trifluoromethyl)-1,6-dihydropyridine-3-carboxamide, WD repeat-containing protein 5
著者Mabanglo, M.F, Wilson, B.J, Krausser, C, Hoffer, L, Al-awar, R, Vedadi, M.
登録日2024-04-03
公開日2024-11-06
最終更新日2024-12-04
実験手法X-RAY DIFFRACTION (2.05 Å)
主引用文献Crystal structures of DCAF1-PROTAC-WDR5 ternary complexes provide insight into DCAF1 substrate specificity.
Nat Commun, 15, 2024
9BA2
DownloadVisualize
BU of 9ba2 by Molmil
Crystal structure of the binary complex of DCAF1 and WDR5
分子名称: DDB1- and CUL4-associated factor 1, IMIDAZOLE, WD repeat-containing protein 5
著者Mabanglo, M.F, Wilson, B.J, Srivastava, S, Al-awar, R, Vedadi, M.
登録日2024-04-03
公開日2024-11-06
最終更新日2024-12-04
実験手法X-RAY DIFFRACTION (2.97 Å)
主引用文献Crystal structures of DCAF1-PROTAC-WDR5 ternary complexes provide insight into DCAF1 substrate specificity.
Nat Commun, 15, 2024
2WBL
DownloadVisualize
BU of 2wbl by Molmil
Three-dimensional structure of a binary ROP-PRONE complex
分子名称: RAC-LIKE GTP-BINDING PROTEIN ARAC2, RHO OF PLANTS GUANINE NUCLEOTIDE EXCHANGE FACTOR 8
著者Thomas, C, Fricke, I, Weyand, M, Berken, A.
登録日2009-03-02
公開日2009-04-14
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献3D Structure of a Binary Rop-Prone Complex: The Final Intermediate for a Complete Set of Molecular Snapshots of the Ropgef Reaction.
Biol.Chem., 390, 2009
9DLW
DownloadVisualize
BU of 9dlw by Molmil
Crystal structure of the ternary complex of DCAF1 and WDR5 with PROTAC, OICR-41114
分子名称: DDB1- and CUL4-associated factor 1, N-{(1P)-5'-({(32E)-33-[(3P)-4-{[(1S)-3-amino-1-(3-chloro-4-fluorophenyl)-3-oxopropyl]carbamoyl}-3-(4-chloro-2-fluorophenyl)-1H-pyrrol-2-yl]-31-oxo-3,6,9,12,15,18,21,24,27-nonaoxa-30-azatritriacont-32-en-1-yl}carbamoyl)-2'-fluoro-4-[(3R,5S)-3,4,5-trimethylpiperazin-1-yl][1,1'-biphenyl]-3-yl}-6-oxo-4-(trifluoromethyl)-1,6-dihydropyridine-3-carboxamide, WD repeat-containing protein 5
著者Mabanglo, M.F, Mamai, A, Wilson, B.J, Hoffer, L, Al-awar, R, Vedadi, M.
登録日2024-09-11
公開日2024-11-06
最終更新日2024-12-04
実験手法X-RAY DIFFRACTION (2.07 Å)
主引用文献Crystal structures of DCAF1-PROTAC-WDR5 ternary complexes provide insight into DCAF1 substrate specificity.
Nat Commun, 15, 2024
3IAB
DownloadVisualize
BU of 3iab by Molmil
Crystal structure of RNase P /RNase MRP proteins Pop6, Pop7 in a complex with the P3 domain of RNase MRP RNA
分子名称: P3 domain of the RNA component of RNase MRP, Ribonucleases P/MRP protein subunit POP6, Ribonucleases P/MRP protein subunit POP7, ...
著者Perederina, A, Esakova, O.A, Quan, C, Khanova, E, Krasilnikov, A.S.
登録日2009-07-13
公開日2010-01-26
最終更新日2024-10-30
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Eukaryotic ribonucleases P/MRP: the crystal structure of the P3 domain
Embo J., 29, 2010
4R0D
DownloadVisualize
BU of 4r0d by Molmil
Crystal structure of a eukaryotic group II intron lariat
分子名称: GROUP IIB INTRON LARIAT, IRIDIUM HEXAMMINE ION, LIGATED EXONS, ...
著者Robart, A.R, Chan, R.T, Peters, J.K, Rajashankar, K.R, Toor, N.
登録日2014-07-30
公開日2014-10-01
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (3.676 Å)
主引用文献Crystal structure of a eukaryotic group II intron lariat.
Nature, 514, 2014
4R3N
DownloadVisualize
BU of 4r3n by Molmil
Crystal structure of the ternary complex of sp-ASADH with NADP and 1,2,3-Benzenetricarboxylic acid
分子名称: 1,2-ETHANEDIOL, ACETATE ION, Aspartate-semialdehyde dehydrogenase, ...
著者Pavlovsky, A.G, Viola, R.E.
登録日2014-08-16
公開日2014-12-10
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.35 Å)
主引用文献A cautionary tale of structure-guided inhibitor development against an essential enzyme in the aspartate-biosynthetic pathway.
Acta Crystallogr.,Sect.D, 70, 2014
1GTH
DownloadVisualize
BU of 1gth by Molmil
DIHYDROPYRIMIDINE DEHYDROGENASE (DPD) FROM PIG, TERNARY COMPLEX WITH NADPH AND 5-IODOURACIL
分子名称: (5S)-5-IODODIHYDRO-2,4(1H,3H)-PYRIMIDINEDIONE, 5-IODOURACIL, DIHYDROPYRIMIDINE DEHYDROGENASE, ...
著者Dobritzsch, D, Ricagno, S, Schneider, G, Schnackerz, K.D, Lindqvist, Y.
登録日2002-01-15
公開日2002-04-11
最終更新日2024-05-01
実験手法X-RAY DIFFRACTION (2.25 Å)
主引用文献Crystal structure of the productive ternary complex of dihydropyrimidine dehydrogenase with NADPH and 5-iodouracil. Implications for mechanism of inhibition and electron transfer.
J. Biol. Chem., 277, 2002
7U1N
DownloadVisualize
BU of 7u1n by Molmil
Crystal structure of the Anopheles darlingi AD-118 long form D7 salivary protein
分子名称: 1,2-ETHANEDIOL, 2-(2-METHOXYETHOXY)ETHANOL, 2-ETHOXYETHANOL, ...
著者Alvarenga, P.H, Gittis, A.G, Garboczi, D.N, Andersen, J.F.
登録日2022-02-21
公開日2022-05-25
最終更新日2024-10-23
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Functional aspects of evolution in a cluster of salivary protein genes from mosquitoes.
Insect Biochem.Mol.Biol., 146, 2022
3ORG
DownloadVisualize
BU of 3org by Molmil
Crystal Structure of a eukaryotic CLC transporter
分子名称: CHLORIDE ION, CmCLC
著者Feng, L, MacKinnon, R.
登録日2010-09-07
公開日2010-10-06
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (3.5 Å)
主引用文献Structure of a eukaryotic CLC transporter defines an intermediate state in the transport cycle.
Science, 330, 2010

238582

件を2025-07-09に公開中

PDB statisticsPDBj update infoContact PDBjnumon