Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

4KPV
DownloadVisualize
BU of 4kpv by Molmil
Crystal structure of the complex of ribosome inactivating protein from Momordica balsamina with Pyrimidine-2,4(1H,3H)-dione at 2.57 A resolution
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, URACIL, rRNA N-glycosidase
著者Yamini, S, Pandey, S, Kushwaha, G.S, Sinha, M, Kaur, P, Sharma, S, Singh, T.P.
登録日2013-05-14
公開日2013-05-29
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.57 Å)
主引用文献Crystal structure of the complex of ribosome inactivating protein from Momordica balsamina with Pyrimidine-2,4(1H,3H)-dione at 2.57 A resolution
To be Published
5WQF
DownloadVisualize
BU of 5wqf by Molmil
Structure of fungal meroterpenoid isomerase Trt14
分子名称: CALCIUM ION, Isomerase trt14, N-PROPANOL
著者Mori, T, Iwabuchi, T, Matsuda, Y, Abe, I.
登録日2016-11-26
公開日2017-07-26
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2.001 Å)
主引用文献Molecular basis for the unusual ring reconstruction in fungal meroterpenoid biogenesis
Nat. Chem. Biol., 13, 2017
5WPB
DownloadVisualize
BU of 5wpb by Molmil
Crystal structure of fragment 3-(3-(pyridin-2-ylmethoxy)quinoxalin-2-yl)propanoic acid bound in the ubiquitin binding pocket of the HDAC6 zinc-finger domain
分子名称: 3-{3-[(pyridin-2-yl)methoxy]quinoxalin-2-yl}propanoic acid, Histone deacetylase 6, UNKNOWN ATOM OR ION, ...
著者Harding, R.J, Tempel, W, Ferreira de Freitas, R, Franzoni, I, Ravichandran, M, Lautens, M, Santhakumar, V, Schapira, M, Bountra, C, Edwards, A.M, Arrowsmith, C.H, Structural Genomics Consortium (SGC)
登録日2017-08-04
公開日2017-08-23
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.55 Å)
主引用文献Small Molecule Antagonists of the Interaction between the Histone Deacetylase 6 Zinc-Finger Domain and Ubiquitin.
J. Med. Chem., 60, 2017
3RDE
DownloadVisualize
BU of 3rde by Molmil
Crystal structure of the catalytic domain of porcine leukocyte 12-lipoxygenase
分子名称: 3-{4-[(tridec-2-yn-1-yloxy)methyl]phenyl}propanoic acid, Arachidonate 12-lipoxygenase, 12S-type, ...
著者Funk, M.O, Xu, S, Marnett, L.J, Mueser, T.C.
登録日2011-04-01
公開日2012-04-18
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (1.892 Å)
主引用文献Crystal structure of 12-lipoxygenase catalytic-domain-inhibitor complex identifies a substrate-binding channel for catalysis.
Structure, 20, 2012
4KMG
DownloadVisualize
BU of 4kmg by Molmil
Crystal structure of cytochrome c6B from Synechococcus sp. WH8102
分子名称: Cytochrome C6 (Soluble cytochrome F) (Cytochrome c553), HEME C, SODIUM ION
著者Zatwarnicki, P, Krzywda, S, Barciszewski, J, Jaskolski, M, Szczepaniak, A.
登録日2013-05-08
公開日2014-03-26
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献Cytochrome c6B of Synechococcus sp. WH 8102 - Crystal structure and basic properties of novel c6-like family representative.
Biochem.Biophys.Res.Commun., 443, 2014
4GR6
DownloadVisualize
BU of 4gr6 by Molmil
Crystal structure of AtRbcX2 from Arabidopsis thaliana
分子名称: 1,2-ETHANEDIOL, AtRbcX2
著者Grudnik, P, Golik, P, Kolesinski, P, Dubin, G, Szczepaniak, A.
登録日2012-08-24
公開日2013-01-30
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Insights into eukaryotic Rubisco assembly - Crystal structures of RbcX chaperones from Arabidopsis thaliana.
Biochim.Biophys.Acta, 1830, 2013
7MM7
DownloadVisualize
BU of 7mm7 by Molmil
Crystal structure of HCV NS3/4A protease in complex with NR02-23
分子名称: (2S)-1,1,1-trifluoropropan-2-yl {(2R,4S,6S,12Z,13aS,14aR,16aS)-2-[(7-methoxy-3-methylquinoxalin-2-yl)oxy]-14a-[(1-methylcyclopropane-1-sulfonyl)carbamoyl]-5,16-dioxo-1,2,3,5,6,7,8,9,10,11,13a,14,14a,15,16,16a-hexadecahydrocyclopropa[e]pyrrolo[1,2-a][1,4]diazacyclopentadecin-6-yl}carbamate, 1,2-ETHANEDIOL, NS3/4a protease, ...
著者Zephyr, J, Schiffer, C.A.
登録日2021-04-29
公開日2022-03-09
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.862 Å)
主引用文献Deciphering the Molecular Mechanism of HCV Protease Inhibitor Fluorination as a General Approach to Avoid Drug Resistance.
J.Mol.Biol., 434, 2022
7MMI
DownloadVisualize
BU of 7mmi by Molmil
Crystal structure of HCV NS3/4A D168A protease in complex with NR02-23
分子名称: (2S)-1,1,1-trifluoropropan-2-yl {(2R,4S,6S,12Z,13aS,14aR,16aS)-2-[(7-methoxy-3-methylquinoxalin-2-yl)oxy]-14a-[(1-methylcyclopropane-1-sulfonyl)carbamoyl]-5,16-dioxo-1,2,3,5,6,7,8,9,10,11,13a,14,14a,15,16,16a-hexadecahydrocyclopropa[e]pyrrolo[1,2-a][1,4]diazacyclopentadecin-6-yl}carbamate, NS3/4A protease, ZINC ION
著者Zephyr, J, Schiffer, C.A.
登録日2021-04-29
公開日2022-03-09
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Deciphering the Molecular Mechanism of HCV Protease Inhibitor Fluorination as a General Approach to Avoid Drug Resistance.
J.Mol.Biol., 434, 2022
7MML
DownloadVisualize
BU of 7mml by Molmil
Crystal structure of HCV NS3/4A D168A protease in complex with NR01-145
分子名称: (2R)-1,1,1-trifluoropropan-2-yl {(2R,4R,6S,12Z,13aS,14aR,16aS)-2-[(7-methoxy-3-methylquinoxalin-2-yl)oxy]-14a-[(1-methylcyclopropane-1-sulfonyl)carbamoyl]-5,16-dioxo-1,2,3,5,6,7,8,9,10,11,13a,14,14a,15,16,16a-hexadecahydrocyclopropa[e]pyrrolo[1,2-a][1,4]diazacyclopentadecin-6-yl}carbamate, NS3 protease, SULFATE ION, ...
著者Zephyr, J, Schiffer, C.A.
登録日2021-04-29
公開日2022-03-16
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.701 Å)
主引用文献Deciphering the Molecular Mechanism of HCV Protease Inhibitor Fluorination as a General Approach to Avoid Drug Resistance.
J.Mol.Biol., 434, 2022
7MMA
DownloadVisualize
BU of 7mma by Molmil
Crystal structure of HCV NS3/4A protease in complex with NR01-145
分子名称: (2R)-1,1,1-trifluoropropan-2-yl {(2R,4R,6S,12Z,13aS,14aR,16aS)-2-[(7-methoxy-3-methylquinoxalin-2-yl)oxy]-14a-[(1-methylcyclopropane-1-sulfonyl)carbamoyl]-5,16-dioxo-1,2,3,5,6,7,8,9,10,11,13a,14,14a,15,16,16a-hexadecahydrocyclopropa[e]pyrrolo[1,2-a][1,4]diazacyclopentadecin-6-yl}carbamate, 1,2-ETHANEDIOL, NS3 protease, ...
著者Zephyr, J, Schiffer, C.A.
登録日2021-04-29
公開日2022-03-16
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献Deciphering the Molecular Mechanism of HCV Protease Inhibitor Fluorination as a General Approach to Avoid Drug Resistance.
J.Mol.Biol., 434, 2022
4GSD
DownloadVisualize
BU of 4gsd by Molmil
H5.3 Fab Structure
分子名称: H5.3 Fab Heavy Chain, H5.3 Fab Light Chain
著者Spiller, B.W, Winarski, K.L.
登録日2012-08-27
公開日2013-08-21
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2.251 Å)
主引用文献Human antibodies that neutralize respiratory droplet transmissible H5N1 influenza viruses.
J.Clin.Invest., 123, 2013
3Q20
DownloadVisualize
BU of 3q20 by Molmil
Crystal structure of RbcX C103A mutant from Thermosynechococcus elongatus
分子名称: ACETATE ION, HEXANE-1,6-DIOL, RbcX protein
著者Tarnawski, M, Krzywda, S, Szczepaniak, A, Jaskolski, M.
登録日2010-12-19
公開日2011-01-26
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.71 Å)
主引用文献Structure of the RuBisCO chaperone RbcX from the thermophilic cyanobacterium Thermosynechococcus elongatus
Acta Crystallogr.,Sect.F, 67, 2011
1PWU
DownloadVisualize
BU of 1pwu by Molmil
Crystal Structure of Anthrax Lethal Factor complexed with (3-(N-hydroxycarboxamido)-2-isobutylpropanoyl-Trp-methylamide), a known small molecule inhibitor of matrix metalloproteases.
分子名称: 3-(N-HYDROXYCARBOXAMIDO)-2-ISOBUTYLPROPANOYL-TRP-METHYLAMIDE, Lethal factor, ZINC ION
著者Wong, T.Y, Schwarzenbacher, R, Liddington, R.C.
登録日2003-07-02
公開日2004-02-03
最終更新日2023-08-16
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献The structural basis for substrate and inhibitor selectivity of the anthrax lethal factor.
Nat.Struct.Mol.Biol., 11, 2004
5T88
DownloadVisualize
BU of 5t88 by Molmil
Prolyl oligopeptidase from Pyrococcus furiosus
分子名称: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, CHLORIDE ION, PROLINE, ...
著者Ellis-Guardiola, K, Lewis, J, Sukumar, N.
登録日2016-09-06
公開日2017-09-06
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (1.902 Å)
主引用文献Crystal Structure and Conformational Dynamics of Pyrococcus furiosus Prolyl Oligopeptidase.
Biochemistry, 58, 2019
3OC5
DownloadVisualize
BU of 3oc5 by Molmil
Crystal Structure of the vibrio cholerae secreted colonization factor TcpF
分子名称: Toxin coregulated pilus biosynthesis protein F
著者Craig, L, Kolappan, S, Yuen, A.S.W.
登録日2010-08-09
公開日2011-04-20
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Crystal Structure of the Vibrio cholerae Colonization Factor TcpF and Identification of a Functional Immunogenic Site.
J.Mol.Biol., 409, 2011
3LKH
DownloadVisualize
BU of 3lkh by Molmil
Inhibitors of Hepatitis C Virus Polymerase: Synthesis and Characterization of Novel 6-Fluoro-N-[2-Hydroxy-1(S)-Benzamides
分子名称: 2-(2-{[(1S)-1-benzyl-2-hydroxyethyl]amino}-2-oxoethoxy)-N-butyl-6-fluoro-N-methylbenzamide, RNA-directed RNA polymerase
著者Lesburg, C.A.
登録日2010-01-27
公開日2010-03-23
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (2.05 Å)
主引用文献Inhibitors of hepatitis C virus polymerase: synthesis and characterization of novel 2-oxy-6-fluoro-N-((S)-1-hydroxy-3-phenylpropan-2-yl)-benzamides.
Bioorg.Med.Chem.Lett., 20, 2010
3QE2
DownloadVisualize
BU of 3qe2 by Molmil
Crystal Structure of Human NADPH-Cytochrome P450 Reductase
分子名称: CALCIUM ION, FLAVIN MONONUCLEOTIDE, FLAVIN-ADENINE DINUCLEOTIDE, ...
著者Xia, C, Marohnic, C, Panda, S.P, Masters, B.S, Kim, J.-J.P.
登録日2011-01-19
公開日2011-08-03
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献Structural basis for human NADPH-cytochrome P450 oxidoreductase deficiency.
Proc.Natl.Acad.Sci.USA, 108, 2011
3QFT
DownloadVisualize
BU of 3qft by Molmil
Crystal Structure of NADPH-Cytochrome P450 Reductase (FAD/NADPH domain and R457H Mutant)
分子名称: FLAVIN-ADENINE DINUCLEOTIDE, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, NADPH--cytochrome P450 reductase
著者Xia, C, Marohnic, C, Panda, S.P, Masters, B.S, Kim, J.-J.P.
登録日2011-01-22
公開日2011-08-17
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献Structural basis for human NADPH-cytochrome P450 oxidoreductase deficiency.
Proc.Natl.Acad.Sci.USA, 108, 2011
3UH8
DownloadVisualize
BU of 3uh8 by Molmil
N-terminal domain of phage TP901-1 ORF48
分子名称: ORF48
著者Veesler, D, Spinelli, S, Mahony, J, Lichiere, J, Blangy, S, Bricogne, G, Legrand, P, Ortiz-Lombardia, M, Campanacci, V.I, van Sinderen, D, Cambillau, C.
登録日2011-11-03
公開日2012-05-30
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Structure of the phage TP901-1 1.8 MDa baseplate suggests an alternative host adhesion mechanism.
Proc.Natl.Acad.Sci.USA, 109, 2012
3P4A
DownloadVisualize
BU of 3p4a by Molmil
2'Fluoro modified RNA octamer fA2U2
分子名称: 2'Fluoro modified RNA 8-MER, MAGNESIUM ION, STRONTIUM ION
著者Manoharan, M, Akinc, A, Pandey, R.K, Qin, J, Hadwiger, P, John, M, Mills, K, Charisse, K, Maier, M.A, Nechev, L, Greene, E.M, Pallan, P.S, Rozners, E, Rajeev, K.G, Egli, M.
登録日2010-10-06
公開日2011-01-05
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (1.2 Å)
主引用文献Unexpected origins of the enhanced pairing affinity of 2'-fluoro-modified RNA.
Nucleic Acids Res., 39, 2011
1R3J
DownloadVisualize
BU of 1r3j by Molmil
potassium channel KcsA-Fab complex in high concentration of Tl+
分子名称: Antibody Fab fragment heavy chain, Antibody Fab fragment light chain, DIACYL GLYCEROL, ...
著者Zhou, Y, MacKinnon, R.
登録日2003-10-02
公開日2003-11-25
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献The occupancy of ions in the K+ selectivity filter: Charge balance and coupling of ion binding to a protein conformational change underlie high conduction rates
J.Mol.Biol., 333, 2003
3OS2
DownloadVisualize
BU of 3os2 by Molmil
PFV target capture complex (TCC) at 3.32 A resolution
分子名称: DNA (5'-D(*AP*TP*TP*GP*TP*CP*AP*TP*GP*GP*AP*AP*TP*TP*TP*CP*GP*CP*A)-3'), DNA (5'-D(*CP*CP*CP*GP*AP*GP*GP*CP*AP*CP*GP*TP*GP*CP*TP*AP*GP*CP*AP*CP*GP*TP*GP*CP*CP*TP*CP*GP*GP*G)-3'), DNA (5'-D(*TP*GP*CP*GP*AP*AP*AP*TP*TP*CP*CP*AP*TP*GP*AP*CP*A)-3'), ...
著者Maertens, G.N, Hare, S, Cherepanov, P.
登録日2010-09-08
公開日2010-11-17
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (3.32 Å)
主引用文献The mechanism of retroviral integration from X-ray structures of its key intermediates
Nature, 468, 2010
3QFC
DownloadVisualize
BU of 3qfc by Molmil
Crystal Structure of Human NADPH-Cytochrome P450 (V492E mutant)
分子名称: CALCIUM ION, FLAVIN MONONUCLEOTIDE, FLAVIN-ADENINE DINUCLEOTIDE, ...
著者Xia, C, Marohnic, C, Panda, S.P, Masters, B.S, Kim, J.-J.P.
登録日2011-01-21
公開日2011-08-03
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Structural basis for human NADPH-cytochrome P450 oxidoreductase deficiency.
Proc.Natl.Acad.Sci.USA, 108, 2011
3QFV
DownloadVisualize
BU of 3qfv by Molmil
MRCK beta in complex with TPCA-1
分子名称: 1,2-ETHANEDIOL, 2-(carbamoylamino)-5-(4-fluorophenyl)thiophene-3-carboxamide, CDC42BPB protein, ...
著者Heikkila, T.J, Wheatley, E, Crighton, D, Schroder, E, Boakes, A, Kaye, S.J, Mezna, M, Pang, L, Rushbrooke, M, Turnbull, A, Olson, M.F.
登録日2011-01-23
公開日2011-10-12
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.65 Å)
主引用文献Co-crystal structures of inhibitors with MRCK beta , a key regulator of tumor cell invasion.
Plos One, 6, 2011
3QBA
DownloadVisualize
BU of 3qba by Molmil
Reintroducing Electrostatics into Macromolecular Crystallographic Refinement: Z-DNA (X-ray)
分子名称: Z-DNA
著者Fenn, T.D, Schnieders, M.J, Mustyakimov, M, Wu, C, Langan, P, Pande, V.S, Brunger, A.T.
登録日2011-01-12
公開日2011-03-02
最終更新日2024-02-21
実験手法NEUTRON DIFFRACTION (1.53 Å), X-RAY DIFFRACTION
主引用文献Reintroducing electrostatics into macromolecular crystallographic refinement: application to neutron crystallography and DNA hydration.
Structure, 19, 2011

222624

件を2024-07-17に公開中

PDB statisticsPDBj update infoContact PDBjnumon