PDB: 45953 件ウェブページステータス検索Chemie searchBIRD

---

2L7Z	NMR Structure of A13 homedomain 分子名称: Homeobox protein Hox-A13 著者 Ames, J. 登録日 2010-12-27 公開日 2011-11-09 最終更新日 2024-05-15 実験手法 SOLUTION NMR 主引用文献 Structural basis for sequence specific DNA binding and protein dimerization of HOXA13. Plos One, 6, 2011
5EWK	Scabin toxin from Streptomyces Scabies in complex with inhibitor PJ34 分子名称: N~2~,N~2~-DIMETHYL-N~1~-(6-OXO-5,6-DIHYDROPHENANTHRIDIN-2-YL)GLYCINAMIDE, Putative ADP-Ribosyltransferase Scabin 著者 Ravulapalli, R, Lyons, B, Merrill, A.R. 登録日 2015-11-20 公開日 2016-03-23 最終更新日 2023-09-27 実験手法 X-RAY DIFFRACTION (1.6 Å) 主引用文献 Scabin, a Novel DNA-acting ADP-ribosyltransferase from Streptomyces scabies. J.Biol.Chem., 291, 2016
5EWY	Scabin toxin from Streptomyces Scabies in complex with inhibitor P6E 分子名称: 4-(8-fluoranyl-6-oxidanylidene-1,3,4,5-tetrahydrobenzo[c][1,6]naphthyridin-2-yl)butanoic acid, Putative ADP-Ribosyltransferase Scabin 著者 Ravulapalli, R, Lyons, B, Merrill, A.R. 登録日 2015-11-22 公開日 2016-03-23 最終更新日 2017-11-22 実験手法 X-RAY DIFFRACTION (1.4 Å) 主引用文献 Scabin, a Novel DNA-acting ADP-ribosyltransferase from Streptomyces scabies. J.Biol.Chem., 291, 2016
7TAW	Cryo-EM structure of the Csy-AcrIF24-promoter DNA dimer 分子名称: AcrIF24, CRISPR type I-F/YPEST-associated protein Csy2, CRISPR type I-F/YPEST-associated protein Csy3, ... 著者 Mukherjee, I.A, Chang, L. 登録日 2021-12-21 公開日 2022-09-21 最終更新日 2024-06-05 実験手法 ELECTRON MICROSCOPY (2.7 Å) 主引用文献 Structural basis of AcrIF24 as an anti-CRISPR protein and transcriptional suppressor. Nat.Chem.Biol., 18, 2022
7TAX	Cryo-EM structure of the Csy-AcrIF24-promoter DNA complex 分子名称: AcrIF24, CRISPR type I-F/YPEST-associated protein Csy2, CRISPR type I-F/YPEST-associated protein Csy3, ... 著者 Mukherjee, I.A, Chang, L. 登録日 2021-12-21 公開日 2022-09-21 最終更新日 2024-06-05 実験手法 ELECTRON MICROSCOPY (2.8 Å) 主引用文献 Structural basis of AcrIF24 as an anti-CRISPR protein and transcriptional suppressor. Nat.Chem.Biol., 18, 2022
5GKC	The crystal structure of the CPS-6 H148A/F122A 分子名称: Endonuclease G, mitochondrial 著者 Lin, J.L, Yuan, H.S. 登録日 2016-07-04 公開日 2016-11-23 最終更新日 2023-11-08 実験手法 X-RAY DIFFRACTION (1.892 Å) 主引用文献 Crystal structure of endonuclease G in complex with DNA reveals how it nonspecifically degrades DNA as a homodimer. Nucleic Acids Res., 44, 2016
7QXS	Cryo-EM structure of human telomerase-DNA-TPP1-POT1 complex (with POT1 side chains) 分子名称: Adrenocortical dysplasia homolog (Mouse), isoform CRA_a, Histone H2A, ... 著者 Sekne, Z, Ghanim, G.E, van Roon, A.M.M, Nguyen, T.H.D. 登録日 2022-01-27 公開日 2022-03-02 最終更新日 2022-03-23 実験手法 ELECTRON MICROSCOPY (3.91 Å) 主引用文献 Structural basis of human telomerase recruitment by TPP1-POT1. Science, 375, 2022
7QXB	Cryo-EM map of human telomerase-DNA-TPP1-POT1 complex (sharpened map) 分子名称: Adrenocortical dysplasia homolog (Mouse), isoform CRA_a, Histone H2A, ... 著者 Sekne, Z, Ghanim, G.E, van Roon, A.M.M, Nguyen, T.H.D. 登録日 2022-01-26 公開日 2022-03-02 最終更新日 2022-03-23 実験手法 ELECTRON MICROSCOPY (3.91 Å) 主引用文献 Structural basis of human telomerase recruitment by TPP1-POT1. Science, 375, 2022
4R8U	S-SAD structure of DINB-DNA Complex 分子名称: 5'-O-[(R)-hydroxy{[(R)-hydroxy(phosphonooxy)phosphoryl]amino}phosphoryl]thymidine, DNA, DNA polymerase IV, ... 著者 Kottur, J, Nair, D.T, Weinert, T, Oligeric, V, Wang, M. 登録日 2014-09-03 公開日 2015-01-14 最終更新日 2024-03-20 実験手法 X-RAY DIFFRACTION (2.3 Å) 主引用文献 Fast native-SAD phasing for routine macromolecular structure determination Nat.Methods, 12, 2015
6RLW	Structure of the human 8-oxoguanine DNA Glycosylase hOGG1 in complex with inhibitor TH5487 分子名称: 4-(4-bromanyl-2-oxidanylidene-3~{H}-benzimidazol-1-yl)-~{N}-(4-iodophenyl)piperidine-1-carboxamide, N-glycosylase/DNA lyase 著者 Masuyer, G, Stenmark, P. 登録日 2019-05-03 公開日 2020-07-22 最終更新日 2024-01-24 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Targeting OGG1 arrests cancer cell proliferation by inducing replication stress. Nucleic Acids Res., 48, 2020
5NOC	Solution NMR Structure of the C-terminal domain of ParB (Spo0J) 分子名称: Stage 0 sporulation protein J 著者 Higman, V.A, Fisher, G.L.M, Dillingham, M.S, Crump, M.P. 登録日 2017-04-11 公開日 2017-12-13 最終更新日 2024-06-19 実験手法 SOLUTION NMR 主引用文献 The structural basis for dynamic DNA binding and bridging interactions which condense the bacterial centromere. Elife, 6, 2017
5NVR	Crystal structure of the Rif1 N-terminal domain (RIF1-NTD) from Saccharomyces cerevisiae 分子名称: Telomere length regulator protein RIF1 著者 Bunker, R.D, Shi, T, Thoma, N.H. 登録日 2017-05-04 公開日 2017-06-14 最終更新日 2019-04-03 実験手法 X-RAY DIFFRACTION (3.95 Å) 主引用文献 Rif1 maintains telomeres and mediates DNA repair by encasing DNA ends. Nat. Struct. Mol. Biol., 24, 2017
7JK4	Structure of Drosophila ORC bound to AT-rich DNA and Cdc6 分子名称: ADENOSINE-5'-TRIPHOSPHATE, Cell division control protein, DNA (34-MER), ... 著者 Schmidt, J.M, Bleichert, F. 登録日 2020-07-27 公開日 2020-09-09 最終更新日 2024-03-06 実験手法 ELECTRON MICROSCOPY (3.4 Å) 主引用文献 Structural mechanism for replication origin binding and remodeling by a metazoan origin recognition complex and its co-loader Cdc6. Nat Commun, 11, 2020
7JK2	Structure of Drosophila ORC bound to poly(dA/dT) DNA and Cdc6 (conformation 1) 分子名称: ADENOSINE-5'-TRIPHOSPHATE, Cell division control protein, DNA (33-MER), ... 著者 Schmidt, J.M, Bleichert, F. 登録日 2020-07-27 公開日 2020-09-09 最終更新日 2024-03-06 実験手法 ELECTRON MICROSCOPY (3.2 Å) 主引用文献 Structural mechanism for replication origin binding and remodeling by a metazoan origin recognition complex and its co-loader Cdc6. Nat Commun, 11, 2020
7JK3	Structure of Drosophila ORC bound to GC-rich DNA and Cdc6 分子名称: ADENOSINE-5'-TRIPHOSPHATE, Cell division control protein, DNA (33-MER), ... 著者 Schmidt, J.M, Bleichert, F. 登録日 2020-07-27 公開日 2020-09-09 最終更新日 2024-03-06 実験手法 ELECTRON MICROSCOPY (3.4 Å) 主引用文献 Structural mechanism for replication origin binding and remodeling by a metazoan origin recognition complex and its co-loader Cdc6. Nat Commun, 11, 2020
7JK5	Structure of Drosophila ORC bound to DNA 分子名称: ADENOSINE-5'-TRIPHOSPHATE, DNA (32-MER), MAGNESIUM ION, ... 著者 Schmidt, J.M, Bleichert, F. 登録日 2020-07-27 公開日 2020-09-09 最終更新日 2024-03-06 実験手法 ELECTRON MICROSCOPY (3.9 Å) 主引用文献 Structural mechanism for replication origin binding and remodeling by a metazoan origin recognition complex and its co-loader Cdc6. Nat Commun, 11, 2020
2VZ4	The N-terminal domain of MerR-like protein TipAL bound to promoter DNA 分子名称: 5'-D(*CP*TP*CP*CP*TP*CP*AP*CP*GP*TP *CP*AP*CP*GP*TP*GP*AP*GP*GP*TP*G)-3', HTH-TYPE TRANSCRIPTIONAL ACTIVATOR TIPA 著者 Allan, M.G, Stetefeld, J, Schirmer, T. 登録日 2008-07-30 公開日 2009-11-17 最終更新日 2023-12-13 実験手法 X-RAY DIFFRACTION (2.9 Å) 主引用文献 Structure of the Transcriptionally Inactive Merr Domain Tipan in Complex with DNA To be Published
5ZLN	Crystal structure of mouse TLR9 in complex with two DNAs (CpG DNA and TCGCCA DNA) 分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, DNA (5'-D(*AP*GP*GP*CP*GP*TP*TP*TP*TP*T)-3'), ... 著者 Ishida, H, Ohto, U, Shimizu, T. 登録日 2018-03-28 公開日 2018-04-25 最終更新日 2023-11-22 実験手法 X-RAY DIFFRACTION (2.3 Å) 主引用文献 Structural basis for species-specific activation of mouse Toll-like receptor 9 FEBS Lett., 592, 2018
4M47	structure of human DNA polymerase complexed with 8-BrG in the template base paired with incoming non-hydrolyzable GTP 分子名称: 2'-deoxy-5'-O-[(R)-hydroxy{[(R)-hydroxy(phosphonooxy)phosphoryl]amino}phosphoryl]guanosine, DNA polymerase beta, MAGNESIUM ION, ... 著者 Koag, M.C, Min, K, Monzingo, A.F, Lee, S. 登録日 2013-08-06 公開日 2014-01-22 最終更新日 2024-02-28 実験手法 X-RAY DIFFRACTION (2.37 Å) 主引用文献 Structural basis for promutagenicity of 8-halogenated Guanine. J.Biol.Chem., 289, 2014
4NM1	Structure of human DNA polymerase beta complexed with a nicked DNA containing a 8BrG-C at N-1 position and G-C at N position 分子名称: 5'-D(*CP*CP*GP*AP*CP*GP*(BGM)P*CP*GP*CP*AP*TP*CP*AP*GP*C)-3', 5'-D(*GP*CP*TP*GP*AP*TP*GP*CP*GP*CP*C)-3', 5'-D(P*GP*TP*CP*GP*G)-3', ... 著者 Koag, M.-C, Min, K, Monzingo, A.F, Lee, S. 登録日 2013-11-14 公開日 2014-01-22 最終更新日 2024-02-28 実験手法 X-RAY DIFFRACTION (2.415 Å) 主引用文献 Structural basis for promutagenicity of 8-halogenated Guanine. J.Biol.Chem., 289, 2014
4NM2	Structure of human DNA polymerase beta complexed with a nicked DNA containing a 8BrG-G at N-1 position and G-C at N position 分子名称: 5'-D(*CP*CP*GP*AP*CP*GP*(BGM)P*CP*GP*CP*AP*TP*CP*AP*GP*C)-3', 5'-D(*GP*CP*TP*GP*AP*TP*GP*CP*GP*GP*C)-3', 5'-D(P*GP*TP*CP*GP*G)-3', ... 著者 Koag, M.-C, Min, K, Monzingo, A.F, Lee, S. 登録日 2013-11-14 公開日 2014-01-22 最終更新日 2024-02-28 実験手法 X-RAY DIFFRACTION (2.524 Å) 主引用文献 Structural basis for promutagenicity of 8-halogenated Guanine. J.Biol.Chem., 289, 2014
4NLK	Structure of human DNA polymerase beta complexed with 8BrG in the template base-paired with incoming non-hydrolyzable CTP 分子名称: 2'-deoxy-5'-O-[(R)-hydroxy{[(R)-hydroxy(phosphonooxy)phosphoryl]amino}phosphoryl]cytidine, 5'-D(*CP*CP*GP*AP*CP*(BGM)P*TP*CP*GP*CP*AP*TP*CP*AP*GP*C)-3', 5'-D(*GP*CP*TP*GP*AP*TP*GP*CP*GP*A)-3', ... 著者 Koag, M.-C, Min, K, Monzingo, A.F, Lee, S. 登録日 2013-11-14 公開日 2014-01-22 最終更新日 2024-02-28 実験手法 X-RAY DIFFRACTION (2.494 Å) 主引用文献 Structural basis for promutagenicity of 8-halogenated Guanine. J.Biol.Chem., 289, 2014
4NLN	Structure of human DNA polymerase beta complexed with nicked DNA containing a template 8BrG and incoming CTP 分子名称: 5'-D(*CP*CP*GP*AP*CP*(BGM)P*TP*CP*GP*CP*AP*TP*CP*AP*GP*C)-3', 5'-D(*GP*CP*TP*GP*AP*TP*GP*CP*GP*AP*C)-3', 5'-D(P*GP*TP*CP*GP*G)-3', ... 著者 Koag, M.-C, Min, K, Monzingo, A.F, Lee, S. 登録日 2013-11-14 公開日 2014-01-22 最終更新日 2024-02-28 実験手法 X-RAY DIFFRACTION (2.261 Å) 主引用文献 Structural basis for promutagenicity of 8-halogenated Guanine. J.Biol.Chem., 289, 2014
4NLZ	Structure of human DNA polymerase beta complexed with nicked DNA containing a mismatched template 8BrG and incoming GTP 分子名称: 5'-D(*CP*CP*GP*AP*CP*(BGM)P*TP*CP*GP*CP*AP*TP*CP*AP*GP*C)-3', 5'-D(*GP*CP*TP*GP*AP*TP*GP*CP*GP*AP*G)-3', 5'-D(P*GP*TP*CP*GP*G)-3', ... 著者 Koag, M.-C, Min, K, Monzingo, A.F, Lee, S. 登録日 2013-11-14 公開日 2014-01-22 最終更新日 2024-02-28 実験手法 X-RAY DIFFRACTION (2.683 Å) 主引用文献 Structural basis for promutagenicity of 8-halogenated Guanine. J.Biol.Chem., 289, 2014
3BTP	Crystal structure of Agrobacterium tumefaciens VirE2 in complex with its chaperone VirE1: a novel fold and implications for DNA binding 分子名称: AMMONIUM ION, DI(HYDROXYETHYL)ETHER, Protein virE1, ... 著者 Dym, O, Albeck, S, Unger, T, Elbaum, M, Israel Structural Proteomics Center (ISPC) 登録日 2007-12-30 公開日 2008-08-19 最終更新日 2024-02-21 実験手法 X-RAY DIFFRACTION (2.3 Å) 主引用文献 Crystal structure of the Agrobacterium virulence complex VirE1-VirE2 reveals a flexible protein that can accommodate different partners. Proc.Natl.Acad.Sci.Usa, 105, 2008

<398399400401402403404405406407408409410411412413>