PDB: 97138 件ウェブページステータス検索Chemie searchBIRD

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3IEJ	Pyrazole-based Cathepsin S Inhibitors with Arylalkynes as P1 Binding Elements 分子名称: 2-[3-{4-chloro-3-[(4-chlorophenyl)ethynyl]phenyl}-1-(3-morpholin-4-ylpropyl)-1,4,6,7-tetrahydro-5H-pyrazolo[4,3-c]pyridin-5-yl]-2-oxoethanol, Cathepsin S 著者 Bembenek, S. 登録日 2009-07-22 公開日 2009-10-06 最終更新日 2021-10-13 実験手法 X-RAY DIFFRACTION (2.18 Å) 主引用文献 Pyrazole-based cathepsin S inhibitors with arylalkynes as P1 binding elements. Bioorg.Med.Chem.Lett., 19, 2009
4I3Y	Crystal structure of Staphylococcal inositol monophosphatase-1: 100 mM LiCl soaked inhibitory complex 分子名称: GLYCEROL, Inositol monophosphatase family protein, MAGNESIUM ION, ... 著者 Dutta, A, Bhattacharyya, S, Dutta, D, Das, A.K. 登録日 2012-11-26 公開日 2013-11-27 最終更新日 2023-11-08 実験手法 X-RAY DIFFRACTION (2.04 Å) 主引用文献 Structural elucidation of the binding site and mode of inhibition of Li(+) and Mg(2+) in inositol monophosphatase. Febs J., 281, 2014
7F1I	Designed enzyme RA61 M48K/I72D mutant: form II 分子名称: Engineered Retroaldolase 著者 Fujioka, T, Oka, M, Numoto, N, Ito, N, Oda, M, Tanaka, F. 登録日 2021-06-09 公開日 2021-11-24 最終更新日 2023-11-29 実験手法 X-RAY DIFFRACTION (1.4 Å) 主引用文献 Varying the Directionality of Protein Catalysts for Aldol and Retro-Aldol Reactions. Chembiochem, 23, 2022
7F1H	Designed enzyme RA61 M48K/I72D mutant: form I 分子名称: Engineered Retroaldolase, FORMIC ACID, GLYCEROL 著者 Fujioka, T, Oka, M, Numoto, N, Ito, N, Oda, M, Tanaka, F. 登録日 2021-06-09 公開日 2021-11-24 最終更新日 2023-11-29 実験手法 X-RAY DIFFRACTION (1.14 Å) 主引用文献 Varying the Directionality of Protein Catalysts for Aldol and Retro-Aldol Reactions. Chembiochem, 23, 2022
7F1J	Designed enzyme RA61 M48K/I72D mutant: form III 分子名称: Engineered Retroaldolase 著者 Fujioka, T, Oka, M, Numoto, N, Ito, N, Oda, M, Tanaka, F. 登録日 2021-06-09 公開日 2021-11-24 最終更新日 2023-11-29 実験手法 X-RAY DIFFRACTION (1.6 Å) 主引用文献 Varying the Directionality of Protein Catalysts for Aldol and Retro-Aldol Reactions. Chembiochem, 23, 2022
7F1K	Designed enzyme RA61 M48K/I72D mutant: form IV 分子名称: Engineered Retroaldolase 著者 Fujioka, T, Oka, M, Numoto, N, Ito, N, Oda, M, Tanaka, F. 登録日 2021-06-09 公開日 2021-11-24 最終更新日 2023-11-29 実験手法 X-RAY DIFFRACTION (1.05 Å) 主引用文献 Varying the Directionality of Protein Catalysts for Aldol and Retro-Aldol Reactions. Chembiochem, 23, 2022
7F1L	Designed enzyme RA61 M48K/I72D mutant: form V 分子名称: CHLORIDE ION, Engineered Retroaldolase, IMIDAZOLE 著者 Fujioka, T, Oka, M, Numoto, N, Ito, N, Oda, M, Tanaka, F. 登録日 2021-06-09 公開日 2021-11-24 最終更新日 2023-11-29 実験手法 X-RAY DIFFRACTION (1.7 Å) 主引用文献 Varying the Directionality of Protein Catalysts for Aldol and Retro-Aldol Reactions. Chembiochem, 23, 2022
4DRW	Crystal Structure of the Ternary Complex between S100A10, an Annexin A2 N-terminal Peptide and an AHNAK Peptide 分子名称: Neuroblast differentiation-associated protein AHNAK, Protein S100-A10/Annexin A2 chimeric protein 著者 Rezvanpour, A, Lee, T.-W, Junop, M.S, Shaw, G.S. 登録日 2012-02-17 公開日 2012-10-24 最終更新日 2023-09-13 実験手法 X-RAY DIFFRACTION (3.5 Å) 主引用文献 Structure of an asymmetric ternary protein complex provides insight for membrane interaction. Structure, 20, 2012
4KI5	Cystal structure of human factor VIII C2 domain in a ternary complex with murine inhbitory antibodies 3E6 and G99 分子名称: Coagulation factor VIII, MURINE MONOCLONAL 3E6 FAB HEAVY CHAIN, MURINE MONOCLONAL 3E6 FAB LIGHT CHAIN, ... 著者 Walter, J.D, Meeks, S.L, Healey, J.F, Lollar, P, Spiegel, P.C. 登録日 2013-05-01 公開日 2014-01-15 実験手法 X-RAY DIFFRACTION (2.47 Å) 主引用文献 Structure of the factor VIII C2 domain in a ternary complex with 2 inhibitor antibodies reveals classical and nonclassical epitopes. Blood, 122, 2013
7TLX	Crystal Structure of cytochrome c from Pseudomonas putida S16 分子名称: C-type cytochrome, HEME C 著者 Wu, K, Dulchavsky, M, Stull, F, Bardwell, J.C.A. 登録日 2022-01-19 公開日 2022-04-06 最終更新日 2023-10-18 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 The enzyme pseudooxynicotine amine oxidase from Pseudomonas putida S16 is not an oxidase, but a dehydrogenase. J.Biol.Chem., 298, 2022
1RQA	Crystallographic Analysis of the Interaction of Nitric Oxide with Quaternary-T Human Hemoglobin. Beta W73E hemoglobin exposed to NO under anaerobic conditions 分子名称: Hemoglobin alpha chain, Hemoglobin beta chain, NITRIC OXIDE, ... 著者 Chan, N.-L, Kavanaugh, J.S, Rogers, P.H, Arnone, A. 登録日 2003-12-04 公開日 2005-01-04 最終更新日 2024-04-03 実験手法 X-RAY DIFFRACTION (2.11 Å) 主引用文献 Crystallographic analysis of the interaction of nitric oxide with quaternary-T human hemoglobin. Biochemistry, 43, 2004
7NGE	Crystal structure of L-Trp/Indoleamine 2,3-dioxygenagse 1 (hIDO1) complex with the JK-loop refined in the closed conformation 分子名称: CHLORIDE ION, GLYCEROL, Indoleamine 2,3-dioxygenase 1, ... 著者 Mirgaux, M, Wouters, J. 登録日 2021-02-09 公開日 2021-12-29 最終更新日 2024-01-31 実験手法 X-RAY DIFFRACTION (2.3 Å) 主引用文献 Temporary Intermediates of L-Trp Along the Reaction Pathway of Human Indoleamine 2,3-Dioxygenase 1 and Identification of an Exo Site. Int J Tryptophan Res, 14, 2021
7NIN	X-ray crystal structure of LsAA9A - CinnamtanninB1 soak 分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, ACETATE ION, Auxiliary activity 9, ... 著者 Frandsen, K.E.H, Tokin, R, Skov, L, Johansen, K.S, Lo Leggio, L. 登録日 2021-02-12 公開日 2021-08-18 最終更新日 2024-01-31 実験手法 X-RAY DIFFRACTION (1.4 Å) 主引用文献 Inhibition of lytic polysaccharide monooxygenase by natural plant extracts. New Phytol., 232, 2021
7NIM	X-ray crystal structure of LsAA9A - cinnamon extract soak 分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, ACETATE ION, Auxiliary activity 9, ... 著者 Frandsen, K.E.H, Tokin, R, Skov, L, Johansen, K.S, Lo Leggio, L. 登録日 2021-02-12 公開日 2021-08-18 最終更新日 2024-01-31 実験手法 X-RAY DIFFRACTION (1.45 Å) 主引用文献 Inhibition of lytic polysaccharide monooxygenase by natural plant extracts. New Phytol., 232, 2021
3GQC	Structure of human Rev1-DNA-dNTP ternary complex 分子名称: 2'-DEOXYCYTIDINE-5'-TRIPHOSPHATE, 5'-D(*AP*TP*CP*CP*TP*CP*CP*CP*CP*TP*AP*(DOC))-3', 5'-D(*TP*AP*AP*GP*GP*TP*AP*GP*GP*GP*GP*AP*GP*GP*AP*T)-3', ... 著者 Swan, M.K, Aggarwal, A.K. 登録日 2009-03-24 公開日 2009-05-19 最終更新日 2023-09-06 実験手法 X-RAY DIFFRACTION (2.5 Å) 主引用文献 Structure of the human Rev1-DNA-dNTP ternary complex. J.Mol.Biol., 390, 2009
5X8X	Crystal Structure of the mutant Human ROR gamma Ligand Binding Domain With Compound A. 分子名称: (3R,4R)-4-[4-cyclopropyl-5-[3-(2-methylpropyl)cyclobutyl]-1,2,4-triazol-3-yl]-N-(2,4-dimethylphenyl)-1-ethanoyl-pyrrolidine-3-carboxamide, Nuclear receptor ROR-gamma, Nuclear receptor corepressor 2 著者 Noguchi, M, Nomura, A, Murase, K, Doi, S, Yamaguchi, K, Adachi, T. 登録日 2017-03-03 公開日 2017-06-07 最終更新日 2023-11-22 実験手法 X-RAY DIFFRACTION (2.6 Å) 主引用文献 Ternary complex of human ROR gamma ligand-binding domain, inverse agonist and SMRT peptide shows a unique mechanism of corepressor recruitment Genes Cells, 22, 2017
4I40	crystal structure of Staphylococcal inositol monophosphatase-1: 50mM LiCl inhibited complex 分子名称: GLYCEROL, Inositol monophosphatase family protein, MAGNESIUM ION, ... 著者 Dutta, A, Bhattacharyya, S, Dutta, D, Das, A.K. 登録日 2012-11-27 公開日 2013-11-27 最終更新日 2023-11-08 実験手法 X-RAY DIFFRACTION (2.5 Å) 主引用文献 Structural elucidation of the binding site and mode of inhibition of Li(+) and Mg(2+) in inositol monophosphatase. Febs J., 281, 2014
2BGM	X-Ray structure of ternary-Secoisolariciresinol Dehydrogenase 分子名称: MATAIRESINOL, NICOTINAMIDE-ADENINE-DINUCLEOTIDE (ACIDIC FORM), RHIZOME SECOISOLARICIRESINOL DEHYDROGENASE 著者 Youn, B, Moinuddin, S.G, Davin, L.B, Lewis, N.G, Kang, C. 登録日 2004-12-23 公開日 2005-01-13 最終更新日 2023-12-13 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Crystal Structures of Apo-Form and Binary/Ternary Complexes of Podophyllum Secoisolariciresinol Dehydrogenase, an Enzyme Involved in Formation of Health-Protecting and Plant Defense Lignans J.Biol.Chem., 280, 2005
8QLP	CryoEM structure of the RNA/DNA bound SPARTA (BabAgo/TIR-APAZ) tetrameric complex 分子名称: DNA (5'-D(*AP*CP*TP*AP*AP*TP*AP*GP*AP*TP*TP*AP*GP*AP*GP*CP*CP*GP*TP*C)-3'), MAGNESIUM ION, RNA (5'-R(*AP*UP*GP*AP*CP*GP*GP*CP*UP*CP*UP*AP*AP*UP*CP*UP*AP*UP*UP*AP*GP*U)-3'), ... 著者 Finocchio, G, Koopal, B, Potocnik, A, Heijstek, C, Jinek, M, Swarts, D. 登録日 2023-09-20 公開日 2024-01-31 最終更新日 2024-03-06 実験手法 ELECTRON MICROSCOPY (3.14 Å) 主引用文献 Target DNA-dependent activation mechanism of the prokaryotic immune system SPARTA. Nucleic Acids Res., 52, 2024
8QLO	CryoEM structure of the apo SPARTA (BabAgo/TIR-APAZ) complex 分子名称: Short prokaryotic Argonaute, Toll/interleukin-1 receptor domain-containing protein 著者 Finocchio, G, Koopal, B, Potocnik, A, Heijstek, C, Jinek, M, Swarts, D. 登録日 2023-09-20 公開日 2024-01-31 最終更新日 2024-03-06 実験手法 ELECTRON MICROSCOPY (2.57 Å) 主引用文献 Target DNA-dependent activation mechanism of the prokaryotic immune system SPARTA. Nucleic Acids Res., 52, 2024
5Z4B	GB1 structure determination in living eukaryotic cells by in-cell NMR spectroscopy 分子名称: Protein LG 著者 Tanaka, T, Teppei, I, Kamoshida, H, Mishima, M, Shirakawa, M, Guentert, P, Ito, Y. 登録日 2018-01-10 公開日 2019-01-23 最終更新日 2024-05-15 実験手法 SOLUTION NMR 主引用文献 High-Resolution Protein 3D Structure Determination in Living Eukaryotic Cells. Angew.Chem.Int.Ed.Engl., 58, 2019
2BGL	X-Ray structure of binary-Secoisolariciresinol Dehydrogenase 分子名称: NICOTINAMIDE-ADENINE-DINUCLEOTIDE (ACIDIC FORM), RHIZOME SECOISOLARICIRESINOL DEHYDROGENASE 著者 Youn, B, Moinuddin, S.G, Davin, L.B, Lewis, N.G, Kang, C. 登録日 2004-12-23 公開日 2005-01-13 最終更新日 2023-12-13 実験手法 X-RAY DIFFRACTION (2.8 Å) 主引用文献 Crystal Structures of Apo-Form and Binary/Ternary Complexes of Podophyllum Secoisolariciresinol Dehydrogenase, an Enzyme Involved in Formation of Health-Protecting and Plant Defense Lignans J.Biol.Chem., 280, 2005
5ZCZ	Solution structure of the T. Thermophilus HB8 TTHA1718 protein in living eukaryotic cells by in-cell NMR spectroscopy 分子名称: Heavy metal binding protein 著者 Tanaka, T, Teppei, I, Kamoshida, H, Mishima, M, Shirakawa, M, Guentert, P, Ito, Y. 登録日 2018-02-22 公開日 2019-08-21 最終更新日 2024-05-29 実験手法 SOLUTION NMR 主引用文献 High-Resolution Protein 3D Structure Determination in Living Eukaryotic Cells. Angew.Chem.Int.Ed.Engl., 58, 2019
5ZD0	Solution structure of human ubiquitin with three alanine mutations in living eukaryotic cells by in-cell NMR spectroscopy 分子名称: ubiquitin 著者 Tanaka, T, Ikeya, T, Kamoshida, H, Mishima, M, Shirakawa, M, Guentert, P, Ito, Y. 登録日 2018-02-22 公開日 2019-08-21 最終更新日 2024-05-29 実験手法 SOLUTION NMR 主引用文献 High-Resolution Protein 3D Structure Determination in Living Eukaryotic Cells. Angew.Chem.Int.Ed.Engl., 58, 2019
6F5Z	Complex between the Haloferax volcanii Trm112 methyltransferase activator and the Hvo_0019 putative methyltransferase 分子名称: 24-sterol C-methyltransferase, GLYCEROL, S-ADENOSYL-L-HOMOCYSTEINE, ... 著者 Graille, M, van Tran, N. 登録日 2017-12-04 公開日 2018-07-11 最終更新日 2024-05-08 実験手法 X-RAY DIFFRACTION (1.35 Å) 主引用文献 Evolutionary insights into Trm112-methyltransferase holoenzymes involved in translation between archaea and eukaryotes. Nucleic Acids Res., 46, 2018

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