PDB: 1629 件ウェブページステータス検索Chemie searchBIRD

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5V6G	Crystal structure of Influenza A virus Matrix Protein M1(NLS-88R) 分子名称: Matrix protein 1 著者 Musayev, F.N, Safo, M.K, Desai, U.R, Xie, H, Mosier, P.D, Chiang, M.-J. 登録日 2017-03-16 公開日 2017-04-12 最終更新日 2023-10-04 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Maintaining pH-dependent conformational flexibility of M1 is critical for efficient influenza A virus replication. Emerg Microbes Infect, 6, 2017
5V8A	Crystal structure of Influenza A virus matrix protein M1 (NLS-88R, pH 7.3) 分子名称: Matrix protein 1 著者 Musayev, F.N, Safo, M.K, Desai, U.R, Xie, H, Mosier, P.D, Zhou, Q, Chiang, M.-J, Kosikova, M. 登録日 2017-03-21 公開日 2017-04-19 最終更新日 2023-10-04 実験手法 X-RAY DIFFRACTION (3 Å) 主引用文献 Maintaining pH-dependent conformational flexibility of M1 is critical for efficient influenza A virus replication. Emerg Microbes Infect, 6, 2017
5V7B	Crystal structure of Influenza A virus matrix protein M1 (NLS-88E) 分子名称: Matrix protein 1 著者 Musayev, F.N, Safo, M.K, Desai, U.R, Xie, H, Mosier, P.D, Chiang, M.-J. 登録日 2017-03-20 公開日 2017-04-12 最終更新日 2023-10-04 実験手法 X-RAY DIFFRACTION (2.5 Å) 主引用文献 Maintaining pH-dependent conformational flexibility of M1 is critical for efficient influenza A virus replication. Emerg Microbes Infect, 6, 2017
5V7S	Crystal structure of Influenza A virus matrix protein M1 (NLS-88E, pH 6.2) 分子名称: Matrix protein 1, PHOSPHATE ION 著者 Musayev, F.N, Safo, M.K, Althufairi, B, Desai, U.R, Xie, H, Mosier, P.D, Chiang, M.-J, Zhou, Q. 登録日 2017-03-20 公開日 2017-04-12 最終更新日 2023-10-04 実験手法 X-RAY DIFFRACTION (2.5 Å) 主引用文献 Maintaining pH-dependent conformational flexibility of M1 is critical for efficient influenza A virus replication. Emerg Microbes Infect, 6, 2017
3GNE	Crystal structure of alginate lyase vAL-1 from Chlorella virus 分子名称: CITRATE ANION, GLYCEROL, VAL-1 著者 Ogura, K, Yamasaki, M, Hashidume, T, Yamada, T, Mikami, B, Hashimoto, W, Murata, K. 登録日 2009-03-17 公開日 2009-10-20 最終更新日 2024-03-20 実験手法 X-RAY DIFFRACTION (1.2 Å) 主引用文献 Crystal structure of family 14 polysaccharide lyase with pH-dependent modes of action J.Biol.Chem., 284, 2009
6I6B	Crystal structure of the KDEL receptor in the peptide free state. 分子名称: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, ER lumen protein-retaining receptor 2 著者 Braeuer, P, Newstead, S. 登録日 2018-11-15 公開日 2019-02-27 最終更新日 2024-05-01 実験手法 X-RAY DIFFRACTION (2.59 Å) 主引用文献 Structural basis for pH-dependent retrieval of ER proteins from the Golgi by the KDEL receptor. Science, 363, 2019
6I6J	Crystal structure of the KDEL receptor bound to synthetic nanobody. 分子名称: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, ER lumen protein-retaining receptor 2, Sybody 著者 Braeuer, P, Newstead, S. 登録日 2018-11-15 公開日 2019-02-27 最終更新日 2024-01-24 実験手法 X-RAY DIFFRACTION (2.23 Å) 主引用文献 Structural basis for pH-dependent retrieval of ER proteins from the Golgi by the KDEL receptor. Science, 363, 2019
7A7B	Bacillithiol Disulfide Reductase Bdr (YpdA) from Staphylococcus aureus 分子名称: FLAVIN-ADENINE DINUCLEOTIDE, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, YpdA family putative bacillithiol disulfide reductase Bdr 著者 Hammerstad, M, Hersleth, H.-P. 登録日 2020-08-27 公開日 2020-12-30 最終更新日 2024-01-31 実験手法 X-RAY DIFFRACTION (2.9 Å) 主引用文献 The Crystal Structures of Bacillithiol Disulfide Reductase Bdr (YpdA) Provide Structural and Functional Insight into a New Type of FAD-Containing NADPH-Dependent Oxidoreductase. Biochemistry, 59, 2020
7A76	Bacillithiol Disulfide Reductase Bdr (YpdA) from Bacillus cereus 分子名称: FLAVIN-ADENINE DINUCLEOTIDE, SODIUM ION, THIOREDOXIN REDUCTASE 著者 Hammerstad, M, Gudim, I, Hersleth, H.-P. 登録日 2020-08-27 公開日 2020-12-30 最終更新日 2024-05-01 実験手法 X-RAY DIFFRACTION (1.65 Å) 主引用文献 The Crystal Structures of Bacillithiol Disulfide Reductase Bdr (YpdA) Provide Structural and Functional Insight into a New Type of FAD-Containing NADPH-Dependent Oxidoreductase. Biochemistry, 59, 2020
6I6H	Crystal structure of the KDEL receptor in the peptide bound state 分子名称: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, AEKDEL peptide, ER lumen protein-retaining receptor 2 著者 Braeuer, P, Newstead, S. 登録日 2018-11-15 公開日 2019-02-27 最終更新日 2024-01-24 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Structural basis for pH-dependent retrieval of ER proteins from the Golgi by the KDEL receptor. Science, 363, 2019
6FTQ	Crystal structure of human beta-ureidopropionase (beta-alanine synthase) - mutant T299C 分子名称: Beta-ureidopropionase 著者 Dobritzsch, D, Maurer, D. 登録日 2018-02-23 公開日 2018-11-21 最終更新日 2024-01-17 実験手法 X-RAY DIFFRACTION (2.08 Å) 主引用文献 Crystal structure and pH-dependent allosteric regulation of human beta-ureidopropionase, an enzyme involved in anticancer drug metabolism. Biochem. J., 475, 2018
7APR	Bacillithiol Disulfide Reductase Bdr (YpdA) from Staphylococcus aureus 分子名称: FLAVIN-ADENINE DINUCLEOTIDE, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, YpdA family putative bacillithiol disulfide reductase Bdr 著者 Hammerstad, M, Hersleth, H.-P. 登録日 2020-10-19 公開日 2020-12-30 最終更新日 2024-01-31 実験手法 X-RAY DIFFRACTION (3.1 Å) 主引用文献 The Crystal Structures of Bacillithiol Disulfide Reductase Bdr (YpdA) Provide Structural and Functional Insight into a New Type of FAD-Containing NADPH-Dependent Oxidoreductase. Biochemistry, 59, 2020
8JIH	human telomere two-quartet G-quadruplex at pH 5.0 分子名称: DNA (5'-D(*TP*AP*GP*GP*GP*TP*TP*AP*GP*GP*GP*TP*TP*AP*GP*GP*GP*TP*TP*AP*GP*G)-3') 著者 Wang, B, Galer, P, Plavec, J. 登録日 2023-05-26 公開日 2024-04-03 最終更新日 2024-05-08 実験手法 SOLUTION NMR 主引用文献 Unveiling the structural mechanism of a G-quadruplex pH-Driven switch. Biochimie, 214, 2023
8JIC	human telomere two-quartet G-quadruplex at pH 7.0 分子名称: DNA (5'-D(*TP*AP*GP*GP*GP*TP*TP*AP*GP*GP*GP*TP*TP*AP*GP*GP*GP*TP*TP*AP*GP*G)-3') 著者 Wang, B, Galer, P, Plavec, J. 登録日 2023-05-26 公開日 2024-04-03 最終更新日 2024-05-08 実験手法 SOLUTION NMR 主引用文献 Unveiling the structural mechanism of a G-quadruplex pH-Driven switch. Biochimie, 214, 2023
2MX9	NMR structure of N-terminal domain from A. ventricosus minor ampullate spidroin (MiSp) at pH 5.5 分子名称: Minor ampullate spidroin 著者 Otikovs, M, Jaudzems, K, Chen, G, Nordling, K, Rising, A, Johansson, J. 登録日 2014-12-17 公開日 2015-08-19 実験手法 SOLUTION NMR 主引用文献 Diversified Structural Basis of a Conserved Molecular Mechanism for pH-Dependent Dimerization in Spider Silk N-Terminal Domains. Chembiochem, 16, 2015
2MX8	NMR structure of N-terminal domain from A. ventricosus minor ampullate spidroin (MiSp) at pH 7.2 分子名称: Minor ampullate spidroin 著者 Otikovs, M, Jaudzems, K, Chen, G, Nordling, K, Rising, A, Johansson, J. 登録日 2014-12-17 公開日 2015-08-19 最終更新日 2024-10-09 実験手法 SOLUTION NMR 主引用文献 Diversified Structural Basis of a Conserved Molecular Mechanism for pH-Dependent Dimerization in Spider Silk N-Terminal Domains. Chembiochem, 16, 2015
6Q29	Crystal structure of Laccase from Thermus thermophilus HB27 with an open conformation of beta-hairpin (Average deposted dose 2.5 MGy) 分子名称: COPPER (II) ION, Laccase, TETRAETHYLENE GLYCOL, ... 著者 Miranda-Blancas, R, Rudino-Pinera, E. 登録日 2019-08-07 公開日 2020-08-12 最終更新日 2023-10-11 実験手法 X-RAY DIFFRACTION (1.702 Å) 主引用文献 The beta-hairpin from the Thermus thermophilus HB27 laccase works as a pH-dependent switch to regulate laccase activity. J.Struct.Biol., 213, 2021
6TYR	Crystal structure of Laccase from Thermus thermophilus HB27 with a close conformation of its beta-hairpin 分子名称: CITRIC ACID, COPPER (II) ION, GLYCEROL, ... 著者 Miranda-Blancas, R, Rudino-Pinera, E. 登録日 2019-08-09 公開日 2020-08-12 最終更新日 2023-10-11 実験手法 X-RAY DIFFRACTION (1.813 Å) 主引用文献 The beta-hairpin from the Thermus thermophilus HB27 laccase works as a pH-dependent switch to regulate laccase activity. J.Struct.Biol., 213, 2021
5GU7	Crystal Structure of human ERp44 form II 分子名称: Endoplasmic reticulum resident protein 44 著者 Watanabe, S, Inaba, K. 登録日 2016-08-26 公開日 2017-04-12 最終更新日 2023-11-08 実験手法 X-RAY DIFFRACTION (2.05 Å) 主引用文献 Structural basis of pH-dependent client binding by ERp44, a key regulator of protein secretion at the ER-Golgi interface Proc. Natl. Acad. Sci. U.S.A., 114, 2017
5GU6	Crystal structure of Human ERp44 form I 分子名称: CHLORIDE ION, Endoplasmic reticulum resident protein 44 著者 Watanabe, S, Inaba, K. 登録日 2016-08-26 公開日 2017-04-12 最終更新日 2023-11-08 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Structural basis of pH-dependent client binding by ERp44, a key regulator of protein secretion at the ER-Golgi interface Proc. Natl. Acad. Sci. U.S.A., 114, 2017
6W5S	NPC1 structure in GDN micelles at pH 8.0 分子名称: (2S)-3-(hexadecanoyloxy)-2-[(9Z)-octadec-9-enoyloxy]propyl 2-(trimethylammonio)ethyl phosphate, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ... 著者 Yan, N, Qian, H.W, Wu, X.L. 登録日 2020-03-13 公開日 2020-06-17 最終更新日 2020-07-29 実験手法 ELECTRON MICROSCOPY (3 Å) 主引用文献 Structural Basis of Low-pH-Dependent Lysosomal Cholesterol Egress by NPC1 and NPC2. Cell, 182, 2020
6W5V	NPC1-NPC2 complex structure at pH 5.5 分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CHOLESTEROL, ... 著者 Yan, N, Qian, H.W, Wu, X.L. 登録日 2020-03-13 公開日 2020-06-17 最終更新日 2020-07-29 実験手法 ELECTRON MICROSCOPY (4 Å) 主引用文献 Structural Basis of Low-pH-Dependent Lysosomal Cholesterol Egress by NPC1 and NPC2. Cell, 182, 2020
7JWY	Structure of SARS-CoV-2 spike at pH 4.5 分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Spike glycoprotein 著者 Zhou, T, Tsybovsky, Y, Kwong, P.D. 登録日 2020-08-26 公開日 2020-11-25 最終更新日 2021-12-15 実験手法 ELECTRON MICROSCOPY (2.5 Å) 主引用文献 Cryo-EM Structures of SARS-CoV-2 Spike without and with ACE2 Reveal a pH-Dependent Switch to Mediate Endosomal Positioning of Receptor-Binding Domains. Cell Host Microbe, 28, 2020
6W5R	NPC1 structure in Nanodisc 分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CHOLESTEROL, ... 著者 Yan, N, Qian, H.W, Wu, X.L. 登録日 2020-03-13 公開日 2020-06-17 最終更新日 2020-07-29 実験手法 ELECTRON MICROSCOPY (3.6 Å) 主引用文献 Structural Basis of Low-pH-Dependent Lysosomal Cholesterol Egress by NPC1 and NPC2. Cell, 182, 2020
6W5U	NPC1 structure in GDN micelles at pH 5.5, conformation b 分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CHOLESTEROL, ... 著者 Yan, N, Qian, H.W, Wu, X.L. 登録日 2020-03-13 公開日 2020-06-17 最終更新日 2020-07-29 実験手法 ELECTRON MICROSCOPY (3.9 Å) 主引用文献 Structural Basis of Low-pH-Dependent Lysosomal Cholesterol Egress by NPC1 and NPC2. Cell, 182, 2020

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