PDB: 1446 件ウェブページステータス検索Chemie searchBIRD

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6J50	RNA polymerase II elongation complex bound with Spt4/5 and foreign DNA, stalled at SHL(-1) of the nucleosome (tilted conformation) 分子名称: DNA (198-MER), DNA (41-MER), DNA-directed RNA polymerase subunit, ... 著者 Ehara, H, Kujirai, T, Fujino, Y, Shirouzu, M, Kurumizaka, H, Sekine, S. 登録日 2019-01-10 公開日 2019-02-20 最終更新日 2024-03-27 実験手法 ELECTRON MICROSCOPY (4.7 Å) 主引用文献 Structural insight into nucleosome transcription by RNA polymerase II with elongation factors. Science, 363, 2019
6J4X	RNA polymerase II elongation complex bound with Elf1 and Spt4/5, stalled at SHL(-1) of the nucleosome (+1A) 分子名称: DNA (198-MER), DNA-directed RNA polymerase subunit, DNA-directed RNA polymerase subunit beta, ... 著者 Ehara, H, Kujirai, T, Fujino, Y, Shirouzu, M, Kurumizaka, H, Sekine, S. 登録日 2019-01-10 公開日 2019-02-20 最終更新日 2024-03-27 実験手法 ELECTRON MICROSCOPY (4.3 Å) 主引用文献 Structural insight into nucleosome transcription by RNA polymerase II with elongation factors. Science, 363, 2019
6J51	RNA polymerase II elongation complex bound with Spt4/5 and foreign DNA, stalled at SHL(-1) of the nucleosome, weak Elf1 (+1 position) 分子名称: DNA (198-MER), DNA (36-MER), DNA-directed RNA polymerase subunit, ... 著者 Ehara, H, Kujirai, T, Fujino, Y, Shirouzu, M, Kurumizaka, H, Sekine, S. 登録日 2019-01-10 公開日 2019-02-20 最終更新日 2024-03-27 実験手法 ELECTRON MICROSCOPY (4.2 Å) 主引用文献 Structural insight into nucleosome transcription by RNA polymerase II with elongation factors. Science, 363, 2019
6J4Y	RNA polymerase II elongation complex bound with Elf1 and Spt4/5, stalled at SHL(-1) of the nucleosome (+1B) 分子名称: DNA (198-MER), DNA-directed RNA polymerase subunit, DNA-directed RNA polymerase subunit beta, ... 著者 Ehara, H, Kujirai, T, Fujino, Y, Shirouzu, M, Kurumizaka, H, Sekine, S. 登録日 2019-01-10 公開日 2019-02-20 最終更新日 2024-03-27 実験手法 ELECTRON MICROSCOPY (4.3 Å) 主引用文献 Structural insight into nucleosome transcription by RNA polymerase II with elongation factors. Science, 363, 2019
6IR9	RNA polymerase II elongation complex bound with Elf1 and Spt4/5, stalled at SHL(-1) of the nucleosome 分子名称: DNA (198-MER), DNA-directed RNA polymerase subunit, DNA-directed RNA polymerase subunit beta, ... 著者 Ehara, H, Kujirai, T, Fujino, Y, Shirouzu, M, Kurumizaka, H, Sekine, S. 登録日 2018-11-12 公開日 2019-02-20 最終更新日 2024-03-27 実験手法 ELECTRON MICROSCOPY (3.8 Å) 主引用文献 Structural insight into nucleosome transcription by RNA polymerase II with elongation factors. Science, 363, 2019
6J4Z	RNA polymerase II elongation complex bound with Spt4/5 and foreign DNA, stalled at SHL(-1) of the nucleosome 分子名称: DNA (198-MER), DNA (42-MER), DNA-directed RNA polymerase subunit, ... 著者 Ehara, H, Kujirai, T, Fujino, Y, Shirouzu, M, Kurumizaka, H, Sekine, S. 登録日 2019-01-10 公開日 2019-02-20 最終更新日 2024-03-27 実験手法 ELECTRON MICROSCOPY (4.1 Å) 主引用文献 Structural insight into nucleosome transcription by RNA polymerase II with elongation factors. Science, 363, 2019
6J4W	RNA polymerase II elongation complex bound with Elf1 and Spt4/5, stalled at SHL(-5) of the nucleosome 分子名称: DNA (198-MER), DNA-directed RNA polymerase subunit, DNA-directed RNA polymerase subunit beta, ... 著者 Ehara, H, Kujirai, T, Fujino, Y, Shirouzu, M, Kurumizaka, H, Sekine, S. 登録日 2019-01-10 公開日 2019-02-20 最終更新日 2024-03-27 実験手法 ELECTRON MICROSCOPY (7.9 Å) 主引用文献 Structural insight into nucleosome transcription by RNA polymerase II with elongation factors. Science, 363, 2019
1A1D	YEAST RNA POLYMERASE SUBUNIT RPB8, NMR, MINIMIZED AVERAGE STRUCTURE, ALPHA CARBONS ONLY 分子名称: RNA POLYMERASE 著者 Krapp, S, Kelly, G, Reischl, J, Weinzierl, R, Matthews, S. 登録日 1997-12-10 公開日 1999-03-02 最終更新日 2024-04-10 実験手法 SOLUTION NMR 主引用文献 Eukaryotic RNA polymerase subunit RPB8 is a new relative of the OB family. Nat.Struct.Biol., 5, 1998
1YTY	Structural basis for recognition of UUUOH 3'-terminii of nascent RNA pol III transcripts by La autoantigen 分子名称: 5'-R(*UP*GP*CP*UP*GP*UP*UP*UP*U)-3', Lupus La protein 著者 Teplova, M, Yuan, Y.R, Ilin, S, Malinina, L, Phan, A.T, Teplov, A, Patel, D.J. 登録日 2005-02-11 公開日 2006-01-17 最終更新日 2011-07-13 実験手法 X-RAY DIFFRACTION (2.29 Å) 主引用文献 Structural Basis for Recognition and Sequestration of UUU(OH) 3' Temini of Nascent RNA Polymerase III Transcripts by La, a Rheumatic Disease Autoantigen. Mol.Cell, 21, 2006
1ZH5	Structural basis for recognition of UUUOH 3'-terminii of nascent RNA pol III transcripts by La autoantigen 分子名称: 5'-R(*UP*GP*CP*UP*GP*UP*UP*UP*U)-3', Lupus La protein, SULFATE ION 著者 Teplova, M, Yuan, Y.R, Ilin, S, Malinina, L, Phan, A.T, Teplov, A, Patel, D.J. 登録日 2005-04-22 公開日 2006-01-17 最終更新日 2011-07-13 実験手法 X-RAY DIFFRACTION (1.85 Å) 主引用文献 Structural Basis for Recognition and Sequestration of UUU(OH) 3' Temini of Nascent RNA Polymerase III Transcripts by La, a Rheumatic Disease Autoantigen. Mol.Cell, 21, 2006
5OT2	RNA polymerase II elongation complex in the presence of 3d-Napht-A 分子名称: 2-ethyl-7-methoxy-naphthalene, DNA non-template strand, DNA template strand, ... 著者 Malvezzi, S, Farnung, L, Aloisi, C, Angelov, T, Cramer, P, Sturla, S.J. 登録日 2017-08-19 公開日 2017-11-01 最終更新日 2019-07-10 実験手法 X-RAY DIFFRACTION (3.2 Å) 主引用文献 Mechanism of RNA polymerase II stalling by DNA alkylation. Proc. Natl. Acad. Sci. U.S.A., 114, 2017
5XON	RNA Polymerase II elongation complex bound with Spt4/5 and TFIIS 分子名称: DNA (48-MER), DNA-directed RNA polymerase subunit, DNA-directed RNA polymerase subunit beta, ... 著者 Ehara, H, Yokoyama, T, Shigematsu, H, Shirouzu, M, Sekine, S. 登録日 2017-05-29 公開日 2017-08-16 最終更新日 2024-03-27 実験手法 ELECTRON MICROSCOPY (3.83 Å) 主引用文献 Structure of the complete elongation complex of RNA polymerase II with basal factors Science, 357, 2017
7OBA	Cryo-EM structure of human RNA Polymerase I in complex with RRN3 分子名称: DNA-directed RNA polymerase I subunit RPA1, DNA-directed RNA polymerase I subunit RPA12, DNA-directed RNA polymerase I subunit RPA2, ... 著者 Misiaszek, A.D, Girbig, M, Mueller, C.W. 登録日 2021-04-21 公開日 2021-12-08 最終更新日 2021-12-22 実験手法 ELECTRON MICROSCOPY (3.1 Å) 主引用文献 Cryo-EM structures of human RNA polymerase I. Nat.Struct.Mol.Biol., 28, 2021
7OBB	Cryo-EM structure of human RNA Polymerase I Open Complex 分子名称: DNA non-template strand, DNA template strand, DNA-directed RNA polymerase I subunit RPA1, ... 著者 Misiaszek, A.D, Girbig, M, Mueller, C.W. 登録日 2021-04-21 公開日 2021-12-08 最終更新日 2021-12-22 実験手法 ELECTRON MICROSCOPY (3.3 Å) 主引用文献 Cryo-EM structures of human RNA polymerase I. Nat.Struct.Mol.Biol., 28, 2021
7OB9	Cryo-EM structure of human RNA Polymerase I in elongation state 分子名称: DNA non-template strand, DNA template strand, DNA-directed RNA polymerase I subunit RPA1, ... 著者 Misiaszek, A.D, Girbig, M, Mueller, C.W. 登録日 2021-04-21 公開日 2021-12-08 最終更新日 2021-12-22 実験手法 ELECTRON MICROSCOPY (2.7 Å) 主引用文献 Cryo-EM structures of human RNA polymerase I. Nat.Struct.Mol.Biol., 28, 2021
2R92	Elongation complex of RNA polymerase II with artificial RdRP scaffold 分子名称: DNA-directed RNA polymerase II subunit RPB1, DNA-directed RNA polymerase II subunit RPB11, DNA-directed RNA polymerase II subunit RPB2, ... 著者 Lehmann, E, Brueckner, F, Cramer, P. 登録日 2007-09-12 公開日 2007-11-27 最終更新日 2017-10-25 実験手法 X-RAY DIFFRACTION (3.8 Å) 主引用文献 Molecular basis of RNA-dependent RNA polymerase II activity. Nature, 450, 2007
7Z1L	Structure of yeast RNA Polymerase III Pre-Termination Complex (PTC) 分子名称: (3R,5S,7R,8R,9S,10S,12S,13R,14S,17R)-10,13-dimethyl-17-[(2R)-pentan-2-yl]-2,3,4,5,6,7,8,9,11,12,14,15,16,17-tetradecahydro-1H-cyclopenta[a]phenanthrene-3,7,12-triol, DNA-directed RNA polymerase III subunit RPC1, DNA-directed RNA polymerase III subunit RPC10, ... 著者 Girbig, M, Mueller, C.W. 登録日 2022-02-24 公開日 2022-08-31 最終更新日 2022-09-21 実験手法 ELECTRON MICROSCOPY (2.8 Å) 主引用文献 Architecture of the yeast Pol III pre-termination complex and pausing mechanism on poly(dT) termination signals. Cell Rep, 40, 2022
7Z1M	Structure of yeast RNA Polymerase III Elongation Complex (EC) 分子名称: (3R,5S,7R,8R,9S,10S,12S,13R,14S,17R)-10,13-dimethyl-17-[(2R)-pentan-2-yl]-2,3,4,5,6,7,8,9,11,12,14,15,16,17-tetradecahydro-1H-cyclopenta[a]phenanthrene-3,7,12-triol, DNA-directed RNA polymerase III subunit RPC1, DNA-directed RNA polymerase III subunit RPC10, ... 著者 Girbig, M, Mueller, C.W. 登録日 2022-02-24 公開日 2022-08-31 最終更新日 2022-09-21 実験手法 ELECTRON MICROSCOPY (3.4 Å) 主引用文献 Architecture of the yeast Pol III pre-termination complex and pausing mechanism on poly(dT) termination signals. Cell Rep, 40, 2022
7Z1O	Structure of yeast RNA Polymerase III PTC + NTPs 分子名称: CHAPSO, DNA-directed RNA polymerase III subunit RPC1, DNA-directed RNA polymerase III subunit RPC10, ... 著者 Girbig, M, Mueller, C.W. 登録日 2022-02-24 公開日 2022-08-31 最終更新日 2022-09-21 実験手法 ELECTRON MICROSCOPY (2.7 Å) 主引用文献 Architecture of the yeast Pol III pre-termination complex and pausing mechanism on poly(dT) termination signals. Cell Rep, 40, 2022
7Z1N	Structure of yeast RNA Polymerase III Delta C53-C37-C11 分子名称: CHAPSO, DNA-directed RNA polymerase III subunit RPC1, DNA-directed RNA polymerase III subunit RPC2, ... 著者 Girbig, M, Mueller, C.W. 登録日 2022-02-24 公開日 2022-08-31 最終更新日 2022-09-21 実験手法 ELECTRON MICROSCOPY (3.9 Å) 主引用文献 Architecture of the yeast Pol III pre-termination complex and pausing mechanism on poly(dT) termination signals. Cell Rep, 40, 2022
7KEF	RNA polymerase II elongation complex with unnatural base dTPT3, rNaM in swing state 分子名称: (1S)-1,4-anhydro-1-(3-methoxynaphthalen-2-yl)-5-O-phosphono-D-ribitol, DNA-directed RNA polymerase II subunit RPB1, DNA-directed RNA polymerase II subunit RPB11, ... 著者 Oh, J, Wang, D. 登録日 2020-10-10 公開日 2021-06-23 最終更新日 2023-10-18 実験手法 X-RAY DIFFRACTION (3.89 Å) 主引用文献 Transcriptional processing of an unnatural base pair by eukaryotic RNA polymerase II. Nat.Chem.Biol., 17, 2021
7KED	RNA polymerase II elongation complex with unnatural base dTPT3 分子名称: DNA-directed RNA polymerase II subunit RPB1, DNA-directed RNA polymerase II subunit RPB11, DNA-directed RNA polymerase II subunit RPB2, ... 著者 Oh, J, Wang, W, Wang, D. 登録日 2020-10-10 公開日 2021-06-23 最終更新日 2023-10-18 実験手法 X-RAY DIFFRACTION (3.6 Å) 主引用文献 Transcriptional processing of an unnatural base pair by eukaryotic RNA polymerase II. Nat.Chem.Biol., 17, 2021
7KEE	RNA polymerase II elongation complex with unnatural base dTPT3, rNaMTP bound to E-site 分子名称: (1S)-1,4-anhydro-5-O-[(R)-hydroxy{[(S)-hydroxy(phosphonooxy)phosphoryl]oxy}phosphoryl]-1-(3-methoxynaphthalen-2-yl)-D-ribitol, DNA-directed RNA polymerase II subunit RPB1, DNA-directed RNA polymerase II subunit RPB11, ... 著者 Oh, J, Wang, D. 登録日 2020-10-10 公開日 2021-06-23 最終更新日 2023-10-18 実験手法 X-RAY DIFFRACTION (3.45 Å) 主引用文献 Transcriptional processing of an unnatural base pair by eukaryotic RNA polymerase II. Nat.Chem.Biol., 17, 2021
5XOG	RNA Polymerase II elongation complex bound with Spt5 KOW5 and Elf1 分子名称: DIPHOSPHOMETHYLPHOSPHONIC ACID ADENOSYL ESTER, DNA (30-MER), DNA (39-MER), ... 著者 Ehara, H, Shirouzu, M, Sekine, S. 登録日 2017-05-28 公開日 2017-08-16 最終更新日 2024-03-27 実験手法 X-RAY DIFFRACTION (3 Å) 主引用文献 Structure of the complete elongation complex of RNA polymerase II with basal factors Science, 357, 2017
6A5L	RNA polymerase II elongation complex stalled at SHL(-1) of the nucleosome, with foreign DNA 分子名称: DNA (198-MER), DNA (42-MER), DNA-directed RNA polymerase subunit, ... 著者 Kujirai, T, Ehara, H, Fujino, Y, Shirouzu, M, Sekine, S, Kurumizaka, H. 登録日 2018-06-24 公開日 2018-10-03 最終更新日 2024-03-27 実験手法 ELECTRON MICROSCOPY (5.6 Å) 主引用文献 Structural basis of the nucleosome transition during RNA polymerase II passage. Science, 362, 2018

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