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6MYV
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Sialidase26 co-crystallized with DANA-Gc
分子名称: 2,6-anhydro-3,5-dideoxy-5-[(hydroxyacetyl)amino]-D-glycero-L-altro-non-2-enonic acid, Sialidase26
著者Zaramela, L.S, Martino, C, Alisson-Silva, F, Rees, S.D, Diaz, S.L, Chuzel, L, Ganatra, M.B, Taron, C.H, Zuniga, C, Huang, J, Siegel, D, Chang, G, Varki, A, Zengler, K.
登録日2018-11-02
公開日2019-10-02
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Gut bacteria responding to dietary change encode sialidases that exhibit preference for red meat-associated carbohydrates.
Nat Microbiol, 4, 2019
6MNJ
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Hadza microbial sialidase Hz136
分子名称: Hz136
著者Rees, S.D, Zaramela, L, Zengler, K, Chang, G.
登録日2018-10-01
公開日2019-10-02
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Gut bacteria responding to dietary change encode sialidases that exhibit preference for red meat-associated carbohydrates.
Nat Microbiol, 4, 2019
6W2U
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Mayaro Virus glycoprotein E1 ectodomain and glycoportien E2 ectodomain asymmetric unit
分子名称: Spike glycoprotein E1, Spike glycoprotein E2
著者Miller, A.S, Kuhn, R.J.
登録日2020-03-08
公開日2020-10-07
最終更新日2024-03-06
実験手法ELECTRON MICROSCOPY (4.8 Å)
主引用文献Human mAbs Broadly Protect against Arthritogenic Alphaviruses by Recognizing Conserved Elements of the Mxra8 Receptor-Binding Site.
Cell Host Microbe, 28, 2020
6C99
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Crystal structure of FcRn bound to UCB-303
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Beta-2-microglobulin, CITRIC ACID, ...
著者Fox III, D, Abendroth, J, Porter, J, Deboves, H.
登録日2018-01-25
公開日2018-05-30
最終更新日2024-11-06
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Insight into small molecule binding to the neonatal Fc receptor by X-ray crystallography and 100 kHz magic-angle-spinning NMR.
PLoS Biol., 16, 2018
7KYW
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Crystal structure of timothy grass allergen Phl p 12.0101 reveals an unusual profilin dimer
分子名称: CITRIC ACID, Profilin-1
著者O'Malley, A, Kapingidza, A.B, Hyduke, N, Dolamore, C, Chruszcz, M.
登録日2020-12-09
公開日2021-03-31
最終更新日2024-11-06
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Crystal structure of timothy grass allergen Phl p 12.0101 reveals an unusual profilin dimer.
Acta Biochim.Pol., 68, 2021
7JJL
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Crystal structure of Importin Alpha 3 in complex with human LSD1 NLS
分子名称: Importin subunit alpha-3, Lysine-specific histone demethylase 1A
著者Tu, W.J, McCuaig, R, Tan, H.Y.A, Hardy, K, Seddiki, N, Ali, S, Dahlstrom, J.E, Bean, E.G, Dunn, J, Forwood, J.K, Tsimbalyuk, S, Smith, K, Yip, D, Malik, L, Prasana, T, Milburn, P, Rao, S.
登録日2020-07-27
公開日2020-08-05
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Targeting Nuclear LSD1 to Reprogram Cancer Cells and Reinvigorate Exhausted T Cells via a Novel LSD1-EOMES Switch.
Front Immunol, 11, 2020
9B53
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RhAAV4282 Full Capsid
分子名称: Capsid protein VP1
著者Dagotto, G, Jenni, S, Li, Z, Barouch, D.H.
登録日2024-03-22
公開日2024-11-13
実験手法ELECTRON MICROSCOPY (2.58 Å)
主引用文献Identification of a novel neutralization epitope in rhesus AAVs.
Mol Ther Methods Clin Dev, 32, 2024
9B52
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RhAAV4282 Empty Capsid
分子名称: Capsid protein VP1
著者Dagotto, G, Jenni, S, Li, Z, Barouch, D.H.
登録日2024-03-22
公開日2024-11-13
実験手法ELECTRON MICROSCOPY (2.57 Å)
主引用文献Identification of a novel neutralization epitope in rhesus AAVs.
Mol Ther Methods Clin Dev, 32, 2024
7JZL
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SARS-CoV-2 spike in complex with LCB1 (2RBDs open)
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, LCB1, ...
著者Park, Y.J, Veesler, D, Seattle Structural Genomics Center for Infectious Disease (SSGCID)
登録日2020-09-02
公開日2020-09-23
最終更新日2024-10-30
実験手法ELECTRON MICROSCOPY (2.7 Å)
主引用文献De novo design of picomolar SARS-CoV-2 miniprotein inhibitors.
Science, 370, 2020
7JJI
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Structure of SARS-CoV-2 3Q-2P full-length prefusion spike trimer (C3 symmetry)
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2-hydroxyethyl 2-deoxy-3,5-bis-O-(2-hydroxyethyl)-6-O-(2-{[(9E)-octadec-9-enoyl]oxy}ethyl)-alpha-L-xylo-hexofuranoside, ...
著者Bangaru, S, Turner, H.L, Ozorowski, G, Antanasijevic, A, Ward, A.B.
登録日2020-07-26
公開日2020-08-26
最終更新日2024-11-13
実験手法ELECTRON MICROSCOPY (3.6 Å)
主引用文献Structural analysis of full-length SARS-CoV-2 spike protein from an advanced vaccine candidate.
Science, 370, 2020
6VWW
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Crystal Structure of NSP15 Endoribonuclease from SARS CoV-2.
分子名称: ACETIC ACID, CHLORIDE ION, GLYCEROL, ...
著者Kim, Y, Jedrzejczak, R, Maltseva, N, Endres, M, Godzik, A, Michalska, K, Joachimiak, A, Center for Structural Genomics of Infectious Diseases (CSGID)
登録日2020-02-20
公開日2020-03-04
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Crystal structure of Nsp15 endoribonuclease NendoU from SARS-CoV-2.
Protein Sci., 29, 2020
6VKM
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Crystal Structure of Stabilized GP from Makona Variant of Ebola Virus
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Virion spike glycoprotein
著者Gilman, M.S.A, Rutten, L, Langedijk, J.P.M, McLellan, J.S.
登録日2020-01-21
公開日2020-04-15
最終更新日2024-11-06
実験手法X-RAY DIFFRACTION (3.5 Å)
主引用文献Structure-Based Design of Prefusion-Stabilized Filovirus Glycoprotein Trimers.
Cell Rep, 30, 2020
6NOS
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PD-L1 IgV domain V76T with fragment
分子名称: 1-[5-(3,5-dichlorophenyl)furan-2-yl]-N-methylmethanamine, Programmed cell death 1 ligand 1
著者Zhao, B, Perry, E.
登録日2019-01-16
公開日2019-02-20
最終更新日2024-10-30
実験手法X-RAY DIFFRACTION (2.701 Å)
主引用文献Fragment-based screening of programmed death ligand 1 (PD-L1).
Bioorg. Med. Chem. Lett., 29, 2019
6NM8
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IgV-V76T BMS compound 105
分子名称: N-({2,6-dimethoxy-4-[(2-methyl[1,1'-biphenyl]-3-yl)methoxy]phenyl}methyl)-D-alanine, Programmed cell death 1 ligand 1
著者Perry, E, Zhao, B, Fesik, S.
登録日2019-01-10
公開日2019-02-20
最終更新日2024-11-06
実験手法X-RAY DIFFRACTION (2.792 Å)
主引用文献Fragment-based screening of programmed death ligand 1 (PD-L1).
Bioorg. Med. Chem. Lett., 29, 2019
6W01
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The 1.9 A Crystal Structure of NSP15 Endoribonuclease from SARS CoV-2 in the Complex with a Citrate
分子名称: 1,2-ETHANEDIOL, CITRIC ACID, DI(HYDROXYETHYL)ETHER, ...
著者Kim, Y, Jedrzejczak, R, Maltseva, N, Endres, M, Godzik, A, Michalska, K, Joachimiak, A, Center for Structural Genomics of Infectious Diseases (CSGID)
登録日2020-02-28
公開日2020-03-11
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Crystal structure of Nsp15 endoribonuclease NendoU from SARS-CoV-2.
Protein Sci., 29, 2020
7KCZ
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CRYSTAL STRUCTURE OF RHESUS MACAQUE (MACACA MULATTA) IGG1 FC FRAGMENT- FC-GAMMA RECEPTOR III COMPLEX V158 MUTANT
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-3)-[2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, IgG1 Fc, ...
著者Tolbert, W.D, Pazgier, M.
登録日2020-10-07
公開日2021-10-13
最終更新日2024-10-16
実験手法X-RAY DIFFRACTION (3.15 Å)
主引用文献Decoding human-macaque interspecies differences in Fc-effector functions: The structural basis for CD16-dependent effector function in Rhesus macaques.
Front Immunol, 13, 2022
7KFA
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PCSK9 in complex with PCSK9i a 13mer cyclic peptide LDLR disruptor
分子名称: 1-[2,6,10.14-TETRAMETHYL-HEXADECAN-16-YL]-2-[2,10,14-TRIMETHYLHEXADECAN-16-YL]GLYCEROL, CALCIUM ION, Proprotein convertase subtilisin/kexin type 9, ...
著者Chopra, R, Xu, M, Spraggon, G.
登録日2020-10-13
公開日2021-11-10
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.45 Å)
主引用文献Identification of a PCSK9-LDLR disruptor peptide with in vivo function.
Cell Chem Biol, 29, 2022
7KEV
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PCSK9 in complex with a cyclic peptide LDLR disruptor
分子名称: CALCIUM ION, Proprotein convertase subtilisin/kexin type 9, Proprotein convertase subtilisin/kexin type 9 Propeptide, ...
著者Spraggon, G, Chopra, R.
登録日2020-10-12
公開日2021-11-24
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Identification of a PCSK9-LDLR disruptor peptide with in vivo function.
Cell Chem Biol, 29, 2022
8VAO
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Simulation-driven design of prefusion stabilized SARS-CoV-2 spike S2 antigen
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Spike protein S2
著者Zhou, L, McLellan, J.S.
登録日2023-12-11
公開日2024-07-10
最終更新日2024-09-18
実験手法ELECTRON MICROSCOPY (2.8 Å)
主引用文献Simulation-driven design of stabilized SARS-CoV-2 spike S2 immunogens.
Nat Commun, 15, 2024
8V27
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H2BK120ub-modified nucleosome ubiquitin position 3
分子名称: 601 DNA (147-MER), Histone H2A, Histone H2B 1.1, ...
著者Hicks, C.W, Wolberger, C.
登録日2023-11-21
公開日2024-08-28
最終更新日2024-09-25
実験手法ELECTRON MICROSCOPY (3.34 Å)
主引用文献Ubiquitinated histone H2B as gatekeeper of the nucleosome acidic patch.
Nucleic Acids Res., 52, 2024
8V28
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H2BK120ub-modified nucleosome ubiquitin position 4
分子名称: 601 DNA (147-MER), Histone H2A, Histone H2B 1.1, ...
著者Hicks, C.W, Wolberger, C.
登録日2023-11-22
公開日2024-08-28
最終更新日2024-09-25
実験手法ELECTRON MICROSCOPY (3.36 Å)
主引用文献Ubiquitinated histone H2B as gatekeeper of the nucleosome acidic patch.
Nucleic Acids Res., 52, 2024
8V26
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H2BK120ub-modified nucleosome ubiquitin position 2
分子名称: 601 DNA (147-MER), Histone H2A, Histone H2B 1.1, ...
著者Hicks, C.W, Wolberger, C.
登録日2023-11-21
公開日2024-08-28
最終更新日2024-11-13
実験手法ELECTRON MICROSCOPY (3.33 Å)
主引用文献Ubiquitinated histone H2B as gatekeeper of the nucleosome acidic patch.
Nucleic Acids Res., 52, 2024
8CZV
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Structure of MERS 3CL protease in complex with the cyclopropane based inhibitor 17d
分子名称: 3C-like proteinase, [(1~{S},2~{R})-2-[4,4-bis(fluoranyl)cyclohexyl]cyclopropyl]methyl ~{N}-[(2~{S})-1-[[(1~{R},2~{S})-1-[bis(oxidanyl)-oxidanylidene-$l^{5}-sulfanyl]-1-oxidanyl-3-[(3~{S})-2-oxidanylidenepyrrolidin-3-yl]propan-2-yl]amino]-4-methyl-1-oxidanylidene-pentan-2-yl]carbamate, [(1~{S},2~{R})-2-[4,4-bis(fluoranyl)cyclohexyl]cyclopropyl]methyl ~{N}-[(2~{S})-1-[[(1~{S},2~{S})-1-[bis(oxidanyl)-oxidanylidene-$l^{5}-sulfanyl]-1-oxidanyl-3-[(3~{S})-2-oxidanylidenepyrrolidin-3-yl]propan-2-yl]amino]-4-methyl-1-oxidanylidene-pentan-2-yl]carbamate
著者Liu, L, Lovell, S, Battaile, K.P, Nguyen, H.N, Chamandi, S.D, Picard, H.R, Madden, T.K, Thruman, H.A, Kim, Y, Groutas, W.C, Chang, K.O.
登録日2022-05-25
公開日2022-06-22
最終更新日2024-10-23
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Broad-Spectrum Cyclopropane-Based Inhibitors of Coronavirus 3C-like Proteases: Biochemical, Structural, and Virological Studies.
Acs Pharmacol Transl Sci, 6, 2023
8CTK
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Cryo-EM structure of SARS-CoV-2 M protein in a lipid nanodisc
分子名称: Membrane protein
著者Dolan, K.A, Brohawn, S.G.
登録日2022-05-15
公開日2022-06-22
最終更新日2024-06-12
実験手法ELECTRON MICROSCOPY (3.52 Å)
主引用文献Structure of SARS-CoV-2 M protein in lipid nanodiscs.
Elife, 11, 2022
8CZU
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Structure of MERS 3CL protease in complex with the cyclopropane based inhibitor 16d
分子名称: 3C-like proteinase, [(1~{S},2~{S})-2-(cyclohexylmethyl)cyclopropyl]methyl ~{N}-[(2~{S})-1-[[(2~{S})-1-[bis(oxidanyl)-oxidanylidene-$l^{5}-sulfanyl]-1-oxidanyl-3-[(3~{R})-2-oxidanylidene-3,4-dihydropyrrol-3-yl]propan-2-yl]amino]-4-methyl-1-oxidanylidene-pentan-2-yl]carbamate
著者Liu, L, Lovell, S, Battaile, K.P, Nguyen, H.N, Chamandi, S.D, Picard, H.R, Madden, T.K, Thruman, H.A, Kim, Y, Groutas, W.C, Chang, K.O.
登録日2022-05-25
公開日2022-06-22
最終更新日2024-10-23
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Broad-Spectrum Cyclopropane-Based Inhibitors of Coronavirus 3C-like Proteases: Biochemical, Structural, and Virological Studies.
Acs Pharmacol Transl Sci, 6, 2023

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