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2EJJ
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BU of 2ejj by Molmil
Mutant K129M structure of PH0725 from Pyrococcus horikoshii OT3
分子名称: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, GLYCEROL, S-ADENOSYL-L-HOMOCYSTEINE, ...
著者Shimizu, K, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2007-03-16
公開日2007-09-18
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Mutant K129M structure of PH0725 from Pyrococcus horikoshii OT3
to be published
7MXV
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Crystal structure of human exonuclease 1 Exo1 (WT) in complex with 5' recessed-end DNA (ur)
分子名称: DNA (5'-D(*CP*GP*CP*TP*AP*GP*TP*CP*GP*AP*CP*AP*T)-3'), DNA (5'-D(P*TP*CP*GP*AP*CP*TP*AP*GP*CP*G)-3'), Exonuclease 1, ...
著者Shi, Y, Beese, L.S.
登録日2021-05-19
公開日2023-05-10
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.211 Å)
主引用文献Structures of reaction intermediates reveal transient Mg2+-binding events that dynamically coordinate Human Exonuclease I activities
To Be Published
7MXT
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Crystal structure of human exonuclease 1 Exo1 (WT) in complex with 5' recessed-end DNA (cmr)
分子名称: DNA (5'-D(*CP*GP*CP*TP*AP*GP*TP*CP*GP*AP*CP*AP*T)-3'), DNA (5'-D(P*CP*GP*AP*CP*TP*AP*GP*CP*G)-3'), Exonuclease 1, ...
著者Shi, Y, Beese, L.S.
登録日2021-05-19
公開日2023-05-10
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (3.048 Å)
主引用文献Structures of reaction intermediates reveal transient Mg2+-binding events that dynamically coordinate Human Exonuclease I activities
To Be Published
7MXQ
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Crystal structure of human exonuclease 1 Exo1 (WT) in complex with 5' recessed-end DNA (r-1)
分子名称: DNA (5'-D(*CP*GP*CP*TP*AP*GP*TP*CP*GP*AP*CP*AP*T)-3'), DNA (5'-D(P*TP*CP*GP*AP*CP*TP*AP*GP*CP*G)-3'), Exonuclease 1, ...
著者Shi, Y, Beese, L.S.
登録日2021-05-19
公開日2023-05-10
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (3.23 Å)
主引用文献Structures of reaction intermediates reveal transient Mg2+-binding events that dynamically coordinate Human Exonuclease I activities
To Be Published
2C37
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RNASE PH CORE OF THE ARCHAEAL EXOSOME IN COMPLEX WITH U8 RNA
分子名称: 5-O-phosphono-beta-D-ribofuranose, CHLORIDE ION, PROBABLE EXOSOME COMPLEX EXONUCLEASE 1, ...
著者Lorentzen, E, Conti, E.
登録日2005-10-04
公開日2005-11-23
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Structural Basis of 3' End RNA Recognition and Exoribonucleolytic Cleavage by an Exosome Rnase Ph Core.
Mol.Cell, 20, 2005
8FUI
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HIV-1 wild type protease with GRL-02519A, with N-(2,5-dimethylphenyl)-4-(pyridin-3-yl)pyrimidin-2-amine as P2-P3 group
分子名称: ACETATE ION, CHLORIDE ION, FORMIC ACID, ...
著者Wang, Y.-F, Wong-Sam, A.E, Ghosh, A.K, Weber, I.T.
登録日2023-01-17
公開日2023-05-24
最終更新日2024-05-22
実験手法X-RAY DIFFRACTION (1.25 Å)
主引用文献Exploration of imatinib and nilotinib-derived templates as the P2-Ligand for HIV-1 protease inhibitors: Design, synthesis, protein X-ray structural studies, and biological evaluation.
Eur.J.Med.Chem., 255, 2023
8FUJ
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BU of 8fuj by Molmil
HIV-1 wild type protease with GRL-03419A, with N-(2,5-dimethylphenyl)-4-(pyridin-3-yl)pyrimidin-2-amine as P2-P3 group and 3,5-difluorophenylmethyl as the P1 group
分子名称: CHLORIDE ION, FORMIC ACID, GLYCEROL, ...
著者Wang, Y.-F, Agniswamy, J, Ghosh, A.K, Weber, I.T.
登録日2023-01-17
公開日2023-05-24
最終更新日2024-05-22
実験手法X-RAY DIFFRACTION (1.12 Å)
主引用文献Exploration of imatinib and nilotinib-derived templates as the P2-Ligand for HIV-1 protease inhibitors: Design, synthesis, protein X-ray structural studies, and biological evaluation.
Eur.J.Med.Chem., 255, 2023
8POB
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BU of 8pob by Molmil
Crystal structure of Hen Egg White Lysozyme co-crystallized with 10 mM TbXo4-SO3
分子名称: 6-[[4-[(6-carboxypyridin-2-yl)methyl]-7-(3-sulfopropyl)-1,4,7-triazonan-1-yl]methyl]pyridine-2-carboxylic acid, CHLORIDE ION, Lysozyme C, ...
著者Alsalman, Z, Girard, E.
登録日2023-07-04
公開日2024-07-10
最終更新日2024-07-17
実験手法X-RAY DIFFRACTION (1.74 Å)
主引用文献Influence of Chemical Modifications of the Crystallophore on Protein Nucleating Properties and Supramolecular Interactions Network.
Chemistry, 30, 2024
7NQ6
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High resolution crystal structure of C-terminal domain (residues 715-866) of Nucleoporin-98
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, CHLORIDE ION, Nuclear pore complex protein Nup96, ...
著者Trakhanov, S, Goerlich, D, Huyton, T.
登録日2021-03-01
公開日2021-04-07
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献High resolution crystal structure of C-terminal domain (residues 715-866) of Nucleoporin-98
To Be Published
8PUJ
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The surface-exposed lipo-protein of BtuG2 in complex with cyanocobalamin.
分子名称: COB(II)INAMIDE, HYDROXIDE ION, SODIUM ION, ...
著者Whittaker, J, Martinez-Felices, J.M, Guskov, A, Slotboom, D.J.
登録日2023-07-17
公開日2024-07-24
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献The surface-exposed lipo-protein of BtuG3 in complex with cyanocobinamide.
To Be Published
8PTF
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BU of 8ptf by Molmil
The surface-exposed lipo-protein of BtuG2 in complex with cyanocobalamin.
分子名称: COB(II)INAMIDE, SODIUM ION, YncE family protein, ...
著者Whittaker, J, Felices Martinez, J.M, Guskov, A, Slotboom, D.J.
登録日2023-07-14
公開日2024-07-24
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献The surface-exposed lipo-protein of BtuG1 in complex with cyanocobinamide.
To Be Published
7NQA
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BU of 7nqa by Molmil
Crystal structure of Nucleoporin-98 nanobody MS98-6 complex solved at 2.2A resolution
分子名称: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Anti-Nup98 Nanobody MS98-6, Nuclear pore complex protein Nup98-Nup96, ...
著者Sola-Colom, M, Trakhanov, S, Goerlich, D.
登録日2021-03-01
公開日2021-07-21
最終更新日2024-05-22
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献A checkpoint function for Nup98 in nuclear pore formation suggested by novel inhibitory nanobodies.
Embo J., 2024
2BJB
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Mycobacterium Tuberculosis Epsp Synthase In Unliganded State
分子名称: 3-PHOSPHOSHIKIMATE 1-CARBOXYVINYLTRANSFERASE, ACETATE ION, SODIUM ION
著者Bourenkov, G.P, Kachalova, G.S, Strizhov, N, Bruning, M, Vagin, A, Bartunik, H.D.
登録日2005-02-01
公開日2006-03-09
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Mycobacterium Tuberculosis Epsp Synthase in Unliganded State
To be Published
8PNX
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BU of 8pnx by Molmil
Crystal structure of D-amino acid aminotransferase from Blastococcus saxobsidens in PMP form
分子名称: 1,2-ETHANEDIOL, 4'-DEOXY-4'-AMINOPYRIDOXAL-5'-PHOSPHATE, Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase, ...
著者Matyuta, I.O, Boyko, K.M, Nikolaeva, A.Y, Shilova, S.A, Popov, V.O.
登録日2023-07-03
公開日2024-07-10
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Structural determinants of dual substrate recognition in the transaminase from Blastococcus saxobsidens specific to D-amino acids and R-amines
To Be Published
8PIW
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BU of 8piw by Molmil
Crystal structure of Hen Egg White Lysozyme co-crystallized with 10 mM TbXo4-NMet2
分子名称: 6-[[4-[(6-carboxypyridin-2-yl)methyl]-7-[3-(dimethylamino)propyl]-1,4,7-triazonan-1-yl]methyl]pyridine-2-carboxylic acid, CHLORIDE ION, Lysozyme C, ...
著者Alsalman, Z, Girard, E.
登録日2023-06-22
公開日2024-07-10
最終更新日2024-07-17
実験手法X-RAY DIFFRACTION (1.72 Å)
主引用文献Influence of Chemical Modifications of the Crystallophore on Protein Nucleating Properties and Supramolecular Interactions Network.
Chemistry, 30, 2024
8PJD
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BU of 8pjd by Molmil
Crystal Structure of Mus musculus Protein Arginine Methyltransferase 2 94-445
分子名称: ACETATE ION, Protein arginine N-methyltransferase 2, S-ADENOSYL-L-HOMOCYSTEINE, ...
著者Cura, V, Troffer-Charlier, N, Marechal, N, Bonnefond, L, Cavarelli, J.
登録日2023-06-23
公開日2024-07-10
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Crystal Structure of Mus musculus Protein Arginine Methyltransferase 2 94-445
To Be Published
7O1U
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BU of 7o1u by Molmil
X-ray structure of furin in complex with the guanylhydrazone-based inhibitor 1 (BEV241)
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, CHLORIDE ION, ...
著者Dahms, S.O, Brandstetter, H.
登録日2021-03-30
公開日2021-09-01
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献OFF-State-Specific Inhibition of the Proprotein Convertase Furin.
Acs Chem.Biol., 16, 2021
8PTD
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BU of 8ptd by Molmil
The surface-exposed lipo-protein of BtuG1 in complex with cyanocobalamin.
分子名称: COBALAMIN, GLYCEROL, HYDROXIDE ION, ...
著者Whittaker, J, Felices Martinez, J.M, Guskov, A, Slotboom, D.J.
登録日2023-07-14
公開日2024-07-24
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献The surface-exposed lipo-protein of BtuG1 in complex with cyanocobalamin.
To Be Published
7O86
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BU of 7o86 by Molmil
1.73A X-ray crystal structure of the conserved C-terminal (CCT) of human SPAK
分子名称: CALCIUM ION, MAGNESIUM ION, SODIUM ION, ...
著者Elvers, K.T, Bax, B.D, Lipka-Lloyd, M, Mehellou, Y.
登録日2021-04-14
公開日2021-09-22
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.73 Å)
主引用文献Structures of the Human SPAK and OSR1 Conserved C-Terminal (CCT) Domains.
Chembiochem, 23, 2022
2C21
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BU of 2c21 by Molmil
Specificity of the Trypanothione-dependednt Leishmania major Glyoxalase I: Structure and biochemical comparison with the human enzyme
分子名称: (4R)-2-METHYLPENTANE-2,4-DIOL, (4S)-2-METHYL-2,4-PENTANEDIOL, NICKEL (II) ION, ...
著者Ariza, A, Vickers, T.J, Greig, N, Armour, K.A, Eggleston, I.M, Fairlamb, A.H, Bond, C.S.
登録日2005-09-23
公開日2006-02-01
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Specificity of the Trypanothione-Dependent Leishmania Major Glyoxalase I: Structure and Biochemical Comparison with the Human Enzyme.
Mol.Microbiol., 59, 2006
8PWK
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human HINT1 in complex with compound AT8003
分子名称: Histidine triad nucleotide-binding protein 1, SODIUM ION, [(2~{R},3~{R},4~{R},5~{R})-5-[2-azanyl-6-(methylamino)purin-9-yl]-4-fluoranyl-4-methyl-3-oxidanyl-oxolan-2-yl]methyl dihydrogen phosphate
著者Zimberger, C, Canard, B, Ferron, F.
登録日2023-07-20
公開日2024-07-31
実験手法X-RAY DIFFRACTION (2.095 Å)
主引用文献The activation chain of the broad-spectrum antiviral bemnifosbuvir at atomic resolution
Plos Biol., 2024
7OG3
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BU of 7og3 by Molmil
IRED-88
分子名称: NAD(P)-dependent oxidoreductase, NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, SODIUM ION
著者Faller, M, Koch, E.
登録日2021-05-06
公開日2021-10-06
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.904 Å)
主引用文献Machine-Directed Evolution of an Imine Reductase for Activity and Stereoselectivity
Acs Catalysis, 2021
2BPU
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BU of 2bpu by Molmil
The Kedge Holmium Derivative of Hen Egg-White Lysozyme at high resolution from Single Wavelength Anomalous Diffraction
分子名称: CHLORIDE ION, HOLMIUM ATOM, LYSOZYME C, ...
著者Jakoncic, J, Di Michiel, M, Zhong, Z, Honkimaki, V, Jouanneau, Y, Stojanoff, V.
登録日2005-04-25
公開日2006-08-24
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (1.35 Å)
主引用文献Anomalous Diffraction at Ultra-High Energy for Protein Crystallography.
J.Appl.Crystallogr., 39, 2006
8Q1F
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BU of 8q1f by Molmil
D10N,P146A variant of beta-phosphoglucomutase from Lactococcus lactis in complex with native beta-glucose 1,6-bisphosphate intermediate
分子名称: 1,2-ETHANEDIOL, 1,6-di-O-phosphono-beta-D-glucopyranose, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, ...
著者Cruz-Navarrete, F.A, Baxter, N.J, Flinders, A.J, Buzoianu, A, Cliff, M.J, Baker, P.J, Waltho, J.P.
登録日2023-07-31
公開日2024-08-07
実験手法X-RAY DIFFRACTION (1.01 Å)
主引用文献Peri active site catalysis of proline isomerisation is the molecular basis of allomorphy in beta-phosphoglucomutase.
Commun Biol, 7, 2024
1AT5
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HEN EGG WHITE LYSOZYME WITH A SUCCINIMIDE RESIDUE
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CHLORIDE ION, LYSOZYME, ...
著者Noguchi, S, Miyawaki, K, Satow, Y.
登録日1997-08-18
公開日1998-02-25
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Succinimide and isoaspartate residues in the crystal structures of hen egg-white lysozyme complexed with tri-N-acetylchitotriose.
J.Mol.Biol., 278, 1998

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