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7EAZ
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Cryo-EM structure of SARS-CoV-2 Spike D614G variant, one RBD-up conformation 1
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Spike glycoprotein, ...
著者Yang, T.J, Yu, P.Y, Chang, Y.C, Hsu, S.T.D.
登録日2021-03-08
公開日2021-06-23
最終更新日2025-06-25
実験手法ELECTRON MICROSCOPY (3.5 Å)
主引用文献D614G mutation in the SARS-CoV-2 spike protein enhances viral fitness by desensitizing it to temperature-dependent denaturation.
J.Biol.Chem., 297, 2021
5T38
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BU of 5t38 by Molmil
Crystal Structure of the N-terminal domain of EvdMO1 with SAH bound
分子名称: EvdMO1, S-ADENOSYL-L-HOMOCYSTEINE
著者McCulloch, K.M, Berndt, S, Yamakawa, I, Chen, Q, Loukachevitch, L.V, Starbird, C, Perry, N.A, Iverson, T.M.
登録日2016-08-25
公開日2017-09-06
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (1.1502 Å)
主引用文献The Structure of the Bifunctional Everninomicin Biosynthetic Enzyme EvdMO1 Suggests Independent Activity of the Fused Methyltransferase-Oxidase Domains.
Biochemistry, 57, 2018
4KN8
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Crystal structure of Bs-TpNPPase
分子名称: Thermostable NPPase
著者Guo, Z, Wang, F, Huang, J, Gong, W, Ji, C.
登録日2013-05-09
公開日2014-04-09
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.502 Å)
主引用文献Crystal Structure of Thermostable p-nitrophenylphosphatase from Bacillus Stearothermophilus (Bs-TpNPPase)
PROTEIN PEPT.LETT., 21, 2014
7EB5
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Cryo-EM structure of SARS-CoV-2 Spike D614G variant, two RBD-up conformation 2
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Spike glycoprotein
著者Yang, T.J, Yu, P.Y, Chang, Y.C, Hsu, S.T.D.
登録日2021-03-08
公開日2021-06-23
最終更新日2025-06-18
実験手法ELECTRON MICROSCOPY (3.4 Å)
主引用文献D614G mutation in the SARS-CoV-2 spike protein enhances viral fitness by desensitizing it to temperature-dependent denaturation.
J.Biol.Chem., 297, 2021
7EB3
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Cryo-EM structure of SARS-CoV-2 Spike D614G variant, one RBD-up conformation 3
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Spike glycoprotein, ...
著者Yang, T.J, Yu, P.Y, Chang, Y.C, Hsu, S.T.D.
登録日2021-03-08
公開日2021-06-23
最終更新日2025-07-02
実験手法ELECTRON MICROSCOPY (3.6 Å)
主引用文献D614G mutation in the SARS-CoV-2 spike protein enhances viral fitness by desensitizing it to temperature-dependent denaturation.
J.Biol.Chem., 297, 2021
7EB4
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BU of 7eb4 by Molmil
Cryo-EM structure of SARS-CoV-2 Spike D614G variant, two RBD-up conformation 1
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Spike glycoprotein, ...
著者Yang, T.J, Yu, P.Y, Chang, Y.C, Hsu, S.T.D.
登録日2021-03-08
公開日2021-06-23
最終更新日2025-06-25
実験手法ELECTRON MICROSCOPY (3.5 Å)
主引用文献D614G mutation in the SARS-CoV-2 spike protein enhances viral fitness by desensitizing it to temperature-dependent denaturation.
J.Biol.Chem., 297, 2021
2BED
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BU of 2bed by Molmil
Structure of FPT bound to inhibitor SCH207736
分子名称: (11S)-8-CHLORO-11-[1-(METHYLSULFONYL)PIPERIDIN-4-YL]-6-PIPERAZIN-1-YL-11H-BENZO[5,6]CYCLOHEPTA[1,2-B]PYRIDINE, FARNESYL DIPHOSPHATE, Protein farnesyltransferase beta subunit, ...
著者Strickland, C.
登録日2005-10-24
公開日2006-08-08
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Enhanced FTase activity achieved via piperazine interaction with catalytic zinc.
Bioorg.Med.Chem.Lett., 16, 2006
8Z1G
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BU of 8z1g by Molmil
Cryo-EM structure of human ELAC2-pre-tRNA
分子名称: Homo sapiens mitochondrion pre-tRNA-Tyr, PHOSPHATE ION, ZINC ION, ...
著者Liu, Z.M, Xue, C.Y.
登録日2024-04-11
公開日2024-12-18
最終更新日2025-07-02
実験手法ELECTRON MICROSCOPY (3.7 Å)
主引用文献Structural insights into human ELAC2 as a tRNA 3' processing enzyme.
Nucleic Acids Res., 52, 2024
4JE3
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BU of 4je3 by Molmil
An Iml3-Chl4 heterodimer links the core centromere to factors required for accurate chromosome segregation
分子名称: Central kinetochore subunit CHL4, Central kinetochore subunit IML3
著者Hinshaw, S.M, Harrison, S.C.
登録日2013-02-26
公開日2013-10-16
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.282 Å)
主引用文献An iml3-chl4 heterodimer links the core centromere to factors required for accurate chromosome segregation.
Cell Rep, 5, 2013
8TOW
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BU of 8tow by Molmil
Structure of a mutated photosystem II complex reveals perturbation of the oxygen-evolving complex
分子名称: (3R)-beta,beta-caroten-3-ol, 1,2-DI-O-ACYL-3-O-[6-DEOXY-6-SULFO-ALPHA-D-GLUCOPYRANOSYL]-SN-GLYCEROL, 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE, ...
著者Flesher, D.A, Liu, J, Wang, J, Gisriel, C.J, Yang, K.R, Batista, V.S, Debus, R.J, Brudvig, G.W.
登録日2023-08-04
公開日2024-06-19
最終更新日2024-10-23
実験手法ELECTRON MICROSCOPY (2.14 Å)
主引用文献Mutation-induced shift of the photosystem II active site reveals insight into conserved water channels.
J.Biol.Chem., 300, 2024
7NER
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BU of 7ner by Molmil
Crystal structure of the v-Src SH3 domain Q128R mutant
分子名称: SULFATE ION, TETRAETHYLENE GLYCOL, v-Src SH3 domain
著者Camara-Artigas, A, Salinas-Garcia, M.C.
登録日2021-02-04
公開日2021-06-02
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.55 Å)
主引用文献The impact of oncogenic mutations of the viral Src kinase on the structure and stability of the SH3 domain.
Acta Crystallogr D Struct Biol, 77, 2021
5NNJ
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BU of 5nnj by Molmil
Dimer structure of Sortilin ectodomain crystal form 3, 4.0 Angstrom
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Sortilin, beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose
著者Leloup, N.O.L, Janssen, B.J.C.
登録日2017-04-09
公開日2017-11-29
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (4 Å)
主引用文献Low pH-induced conformational change and dimerization of sortilin triggers endocytosed ligand release.
Nat Commun, 8, 2017
7NES
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BU of 7nes by Molmil
Crystal structure of the v-Src SH3 domain N117D-V124L mutant
分子名称: GLYCINE, v-Src SH3 domain
著者Camara-Artigas, A, Salinas-Garcia, M.C.
登録日2021-02-04
公開日2021-06-02
最終更新日2024-05-15
実験手法X-RAY DIFFRACTION (1.35 Å)
主引用文献The impact of oncogenic mutations of the viral Src kinase on the structure and stability of the SH3 domain.
Acta Crystallogr D Struct Biol, 77, 2021
2BOD
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BU of 2bod by Molmil
Catalytic domain of endo-1,4-glucanase Cel6A from Thermobifida fusca in complex with methyl cellobiosyl-4-thio-beta-cellobioside
分子名称: ENDOGLUCANASE E-2, beta-D-glucopyranose-(1-4)-beta-D-glucopyranose-(1-4)-4-thio-beta-D-glucopyranose-(1-4)-methyl beta-D-glucopyranoside
著者Larsson, A.M, Bergfors, T, Dultz, E, Irwin, D.C, Roos, A, Driguez, H, Wilson, D.B, Jones, T.A.
登録日2005-04-10
公開日2005-10-05
最終更新日2024-10-16
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Crystal Structure of Thermobifida Fusca Endoglucanase Cel6A in Complex with Substrate and Inhibitor: The Role of Tyrosine Y73 in Substrate Ring Distortion.
Biochemistry, 44, 2005
8QU7
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BU of 8qu7 by Molmil
Crystal structure of the Plasmodium falciparum Apical membrane antigen (AMA1) in complex with single domain i-body WD34
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, Apical membrane antigen 1, ...
著者Maddumage, J.C, Kvansakul, M.
登録日2023-10-14
公開日2024-07-03
最終更新日2024-11-20
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献A broadly cross-reactive i-body to AMA1 potently inhibits blood and liver stages of Plasmodium parasites.
Nat Commun, 15, 2024
7ENY
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BU of 7eny by Molmil
Crystal structure of hydroxysteroid dehydrogenase from Escherichia coli
分子名称: 7alpha-hydroxysteroid dehydrogenase
著者Kim, K.-H, Lee, C.W, Pardhe, D.P, Hwang, J, Do, H, Lee, Y.M, Lee, J.H, Oh, T.-J.
登録日2021-04-21
公開日2021-07-14
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.703 Å)
主引用文献Crystal structure of an apo 7 alpha-hydroxysteroid dehydrogenase reveals key structural changes induced by substrate and co-factor binding.
J.Steroid Biochem.Mol.Biol., 212, 2021
2J3X
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BU of 2j3x by Molmil
Crystal structure of the enzymatic component C2-I of the C2-toxin from Clostridium botulinum at pH 3.0 (mut-S361R)
分子名称: C2 TOXIN COMPONENT I, GLYCEROL, SULFATE ION
著者Schleberger, C, Hochmann, H, Barth, H, Aktories, K, Schulz, G.E.
登録日2006-08-23
公開日2006-10-11
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献Structure and Action of the Binary C2 Toxin from Clostridium Botulinum.
J.Mol.Biol., 364, 2006
2Z8L
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BU of 2z8l by Molmil
Crystal Structure of the Staphylococcal superantigen-like protein SSL5 at pH 4.6 complexed with sialyl Lewis X
分子名称: Exotoxin 3, GLYCEROL, N-acetyl-alpha-neuraminic acid-(2-3)-beta-D-galactopyranose-(1-4)-[alpha-L-fucopyranose-(1-3)]2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Baker, H.M, Basu, I, Chung, M.C, Caradoc Davies, T, Fraser, J.D, Baker, E.N.
登録日2007-09-06
公開日2007-11-27
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献Crystal structures of the staphylococcal toxin SSL5 in complex with sialyl Lewis X reveal a conserved binding site that shares common features with viral and bacterial sialic acid binding proteins
J.Mol.Biol., 374, 2007
6VKD
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BU of 6vkd by Molmil
Crystal Structure of Inhibitor JNJ-36689282 in Complex with Prefusion RSV F Glycoprotein
分子名称: 1-cyclopropyl-3-({1-[3-(methylsulfonyl)propyl]-1H-pyrrolo[3,2-c]pyridin-2-yl}methyl)-1,3-dihydro-2H-imidazo[4,5-c]pyridin-2-one, CHLORIDE ION, Prefusion RSV F (DS-Cav1), ...
著者McLellan, J.S.
登録日2020-01-20
公開日2020-05-27
最終更新日2024-10-23
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Discovery of 3-({5-Chloro-1-[3-(methylsulfonyl)propyl]-1H-indol-2-yl}methyl)-1-(2,2,2-trifluoroethyl)-1,3-dihydro-2H-imidazo[4,5-c]pyridin-2-one (JNJ-53718678), a Potent and Orally Bioavailable Fusion Inhibitor of Respiratory Syncytial Virus.
J.Med.Chem., 63, 2020
1ZB7
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BU of 1zb7 by Molmil
Crystal Structure of Botulinum Neurotoxin Type G Light Chain
分子名称: CITRATE ANION, ZINC ION, neurotoxin
著者Arndt, J.W, Yu, W, Bi, F, Stevens, R.C.
登録日2005-04-07
公開日2005-07-05
最終更新日2024-10-30
実験手法X-RAY DIFFRACTION (2.35 Å)
主引用文献Crystal structure of botulinum neurotoxin type g light chain: serotype divergence in substrate recognition
Biochemistry, 44, 2005
3LFO
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Crystal structure of T. celer L30e E90A/R92A variant
分子名称: 50S ribosomal protein L30e
著者Chan, C.H, Wong, K.B.
登録日2010-01-18
公開日2010-04-14
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Stabilizing salt-bridge enhances protein thermostability by reducing the heat capacity change of unfolding.
Plos One, 6, 2011
1ZJG
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13mer-co
分子名称: 5'-D(*AP*TP*GP*GP*GP*GP*CP*GP*GP*GP*GP*CP*T)-3', 5'-D(*TP*AP*GP*CP*CP*CP*CP*GP*CP*CP*CP*CP*A)-3', COBALT HEXAMMINE(III), ...
著者Dohm, J.A, Hsu, M.H, Hwu, J.R, Huang, R.C, Moudrianakis, E.N, Lattman, E.E, Gittis, A.G.
登録日2005-04-28
公開日2005-05-10
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Influence of Ions, Hydration, and the Transcriptional Inhibitor P4N on the Conformations of the Sp1 Binding Site.
J.Mol.Biol., 349, 2005
3BQ1
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BU of 3bq1 by Molmil
Insertion ternary complex of Dbh DNA polymerase
分子名称: 2'-3'-DIDEOXYGUANOSINE-5'-TRIPHOSPHATE, CALCIUM ION, DNA (5'-D(*DGP*DAP*DAP*DGP*DCP*DCP*DGP*DGP*DCP*DG)-3'), ...
著者Pata, J.D, Wilson, R.C.
登録日2007-12-19
公開日2008-04-08
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Structural insights into the generation of single-base deletions by the Y family DNA polymerase dbh.
Mol.Cell, 29, 2008
4JIU
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BU of 4jiu by Molmil
Crystal structure of the metallopeptidase zymogen of Pyrococcus abyssi abylysin
分子名称: GLYCEROL, Proabylysin, ZINC ION
著者Lopez-Pelegrin, M, Cerda-Costa, N, Martinez-Jimenez, F, Cintas-Pedrola, A, Canals, A, Peinado, J.R, Marti-Renom, M.A, Lopez-Otin, C, Arolas, J.L, Gomis-Ruth, F.X.
登録日2013-03-07
公開日2013-06-12
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (1.15 Å)
主引用文献A novel family of soluble minimal scaffolds provides structural insight into the catalytic domains of integral membrane metallopeptidases
J.Biol.Chem., 288, 2013
3VBC
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BU of 3vbc by Molmil
Crystal Structure of iL-17 receptor B SEFIR domain
分子名称: Interleukin-17 receptor B
著者Zhang, B, Liu, C, Li, X, Deng, J.
登録日2012-01-02
公開日2013-02-06
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Crystal Structure of IL-17 Receptor B SEFIR Domain.
J.Immunol., 190, 2013

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