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8T0I
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Backbone Dialkylation in Peptide Hairpins: (R)-Ethylpropylglycine variant
分子名称: Immunoglobulin G-binding protein G
著者Heath, S.L, Horne, W.S, Lengyel, G.A.
登録日2023-06-01
公開日2023-08-16
最終更新日2023-11-15
実験手法SOLUTION NMR
主引用文献Effects of chirality and side chain length in C alpha , alpha-dialkylated residues on beta-hairpin peptide folded structure and stability.
Org.Biomol.Chem., 21, 2023
5VMY
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BU of 5vmy by Molmil
Kaiso (ZBTB33) zinc finger DNA binding domain in complex with a hemi CpG-methylated DNA resembling the specific Kaiso binding sequence (KBS)
分子名称: CHLORIDE ION, DNA (5'-D(*CP*GP*TP*TP*AP*TP*TP*CP*GP*CP*GP*GP*GP*AP*AP*GP*CP*A)-3'), DNA (5'-D(*TP*GP*CP*TP*TP*CP*CP*(5CM)P*GP*(5CM)P*GP*AP*AP*TP*AP*AP*CP*G)-3'), ...
著者Nikolova, E.N, Stanfield, R.L, Martinez-Yamout, M.A, Dyson, H.J, Wright, P.E.
登録日2017-04-28
公開日2018-04-04
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.002 Å)
主引用文献CH···O Hydrogen Bonds Mediate Highly Specific Recognition of Methylated CpG Sites by the Zinc Finger Protein Kaiso.
Biochemistry, 57, 2018
5VMW
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Kaiso (ZBTB33) zinc finger DNA binding domain in complex with a double CpG-methylated DNA resembling the specific Kaiso binding sequence (KBS)
分子名称: CHLORIDE ION, DNA (5'-D(*CP*GP*TP*TP*AP*TP*TP*(5CM)P*GP*(5CM)P*GP*GP*GP*AP*AP*GP*CP*A)-3'), DNA (5'-D(*TP*GP*CP*TP*TP*CP*CP*(5CM)P*GP*(5CM)P*GP*AP*AP*TP*AP*AP*CP*G)-3'), ...
著者Nikolova, E.N, Stanfield, R.L, Martinez-Yamout, M.A, Dyson, H.J, Wright, P.E.
登録日2017-04-28
公開日2018-04-04
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.397 Å)
主引用文献CH···O Hydrogen Bonds Mediate Highly Specific Recognition of Methylated CpG Sites by the Zinc Finger Protein Kaiso.
Biochemistry, 57, 2018
1E4R
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Solution structure of the mouse defensin mBD-8
分子名称: Beta-defensin 8
著者Bauer, F, Schweimer, K, Kluver, E, Adermann, K, Forssmann, W.G, Roesch, P, Sticht, H.
登録日2000-07-12
公開日2001-07-12
最終更新日2018-06-20
実験手法SOLUTION NMR
主引用文献Structure determination of human and murine beta-defensins reveals structural conservation in the absence of significant sequence similarity.
Protein Sci., 10, 2001
6K4I
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The partially disordered conformation of ubiquitin (Q41N variant)
分子名称: ubiquitin
著者Wakamoto, T, Ikeya, T, Kitazawa, S, Baxter, N.J, Williamson, M.P, Kitahara, R.
登録日2019-05-24
公開日2019-10-30
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献Paramagnetic relaxation enhancement-assisted structural characterization of a partially disordered conformation of ubiquitin.
Protein Sci., 28, 2019
1EMY
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CRYSTAL STRUCTURE OF ASIAN ELEPHANT (ELEPHAS MAXIMUS) CYANO-MET MYOGLOBIN AT 1.78 ANGSTROMS RESOLUTION. PHE 29 (B10) ACCOUNTS FOR ITS UNUSUAL LIGAND BINDING PROPERTIES
分子名称: CYANIDE ION, MYOGLOBIN, PROTOPORPHYRIN IX CONTAINING FE
著者Bisig, D.A, Piontek, K.
登録日1995-02-22
公開日1995-04-20
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (1.78 Å)
主引用文献Crystal structure of Asian elephant (Elephas maximus) cyano-metmyoglobin at 1.78-A resolution. Phe29(B10) accounts for its unusual ligand binding properties.
J.Biol.Chem., 270, 1995
1EP8
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CRYSTAL STRUCTURE OF A MUTATED THIOREDOXIN, D30A, FROM CHLAMYDOMONAS REINHARDTII
分子名称: THIOREDOXIN CH1, H-TYPE
著者Menchise, V, Corbier, C, Didierjean, C, Saviano, M, Benedetti, E, Jacquot, J.P, Aubry, A.
登録日2000-03-28
公開日2001-12-12
最終更新日2021-11-03
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Crystal structure of the wild-type and D30A mutant thioredoxin h of Chlamydomonas reinhardtii and implications for the catalytic mechanism.
Biochem.J., 359, 2001
1ELG
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NATURE OF THE INACTIVATION OF ELASTASE BY N-PEPTIDYL-O-AROYL HYDROXYLAMINE AS A FUNCTION OF PH
分子名称: (TERT-BUTYLOXYCARBONYL)-ALANYL-ALANYL-AMINE, CALCIUM ION, PORCINE PANCREATIC ELASTASE
著者Ding, X, Rasmussen, B, Demuth, H.-U, Ringe, D, Steinmetz, A.C.U.
登録日1995-03-13
公開日1995-07-10
最終更新日2024-06-05
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献Nature of the inactivation of elastase by N-peptidyl-O-aroyl hydroxylamine as a function of pH.
Biochemistry, 34, 1995
1EDW
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SOLUTION STRUCTURE OF THIRD INTRADISKAL LOOP OF BOVINE RHODOPSIN (RESIDUES 268-293)
分子名称: RHODOPSIN
著者Yeagle, P.L, Salloum, A, Chopra, A, Bhawsar, N, Ali, L.
登録日2000-01-28
公開日2000-08-09
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献Structures of the intradiskal loops and amino terminus of the G-protein receptor, rhodopsin.
J.Pept.Res., 55, 2000
1EEG
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A(GGGG)A HEXAD PAIRING ALIGMENT FOR THE D(G-G-A-G-G-A-G) SEQUENCE
分子名称: DNA (5'-D(*GP*GP*AP*GP*GP*A)-3')
著者Kettani, A, Gorin, A, Majumdar, A, Hermann, T, Skripkin, E, Zhao, H, Jones, R, Patel, D.J.
登録日2000-01-31
公開日2000-04-02
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献A dimeric DNA interface stabilized by stacked A.(G.G.G.G).A hexads and coordinated monovalent cations.
J.Mol.Biol., 297, 2000
1EKL
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TYPE III ANTIFREEZE PROTEIN ISOFORM HPLC 12 E35K
分子名称: PROTEIN (ANTIFREEZE PROTEIN TYPE III)
著者Graether, S.P, Deluca, C.I, Baardsnes, J, Hill, G.A, Davies, P.L, Jia, Z.
登録日1999-01-21
公開日1999-04-29
最終更新日2023-08-09
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献Quantitative and qualitative analysis of type III antifreeze protein structure and function.
J.Biol.Chem., 274, 1999
1EQX
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SOLUTION STRUCTURE DETERMINATION AND MUTATIONAL ANALYSIS OF THE PAPILLOMAVIRUS E6-INTERACTING PEPTIDE OF E6AP
分子名称: PAPILLOMAVIRUS E6-ASSOCIATED PROTEIN
著者Be, X, Hong, Y, Androphy, E.J, Chen, J.J, Baleja, J.D.
登録日2000-04-06
公開日2001-02-28
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献Solution structure determination and mutational analysis of the papillomavirus E6 interacting peptide of E6AP.
Biochemistry, 40, 2001
1EDX
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SOLUTION STRUCTURE OF AMINO TERMINUS OF BOVINE RHODOPSIN (RESIDUES 1-40)
分子名称: RHODOPSIN
著者Yeagle, P.L, Salloum, A, Chopra, A, Bhawsar, N, Ali, L.
登録日2000-01-28
公開日2000-08-09
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献Structures of the intradiskal loops and amino terminus of the G-protein receptor, rhodopsin.
J.Pept.Res., 55, 2000
1SPK
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Solution Structure of RSGI RUH-010, an SH3 Domain from Mouse cDNA
分子名称: RIKEN cDNA 1300006M19
著者Suzuki, Y, Abe, T, Hirota, H, Hayashi, F, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2004-03-17
公開日2004-09-17
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献Solution Structure of RSGI RUH-010, an SH3 Domain from Mouse cDNA
To be Published
1E4S
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Solution structure of the human defensin hBD-1
分子名称: BETA-DEFENSIN 1
著者Bauer, F, Schweimer, K, Kluver, E, Adermann, K, Forssmann, W.G, Roesch, P, Sticht, H.
登録日2000-07-12
公開日2001-07-12
最終更新日2011-07-13
実験手法SOLUTION NMR
主引用文献Structure Determination of Human and Murine Beta-Defensins Reveals Structural Conservation in the Absence of Significant Sequence Similarity
Protein Sci., 10, 2001
1EDV
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SOLUTION STRUCTURE OF 2ND INTRADISKAL LOOP OF BOVINE RHODOPSIN (RESIDUES 172-205)
分子名称: RHODOPSIN
著者Yeagle, P.L, Salloum, A, Chopra, A, Bhawsar, N, Ali, L.
登録日2000-01-28
公開日2000-08-09
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献Structures of the intradiskal loops and amino terminus of the G-protein receptor, rhodopsin.
J.Pept.Res., 55, 2000
1EEK
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SOLUTION STRUCTURE OF A NONPOLAR, NON HYDROGEN BONDED BASE PAIR SURROGATE IN DNA.
分子名称: 5'-D(*CP*GP*CP*AP*TP*(DFT)P*GP*TP*TP*AP*CP*C)-3', 5'-D(*GP*GP*TP*AP*AP*CP*(MBZ)P*AP*TP*GP*CP*G)-3'
著者Kool, E.T, Krugh, T.R, Guckian, K.M.
登録日2000-02-01
公開日2000-02-16
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献Solution Structure of a Nonpolar, Non-Hydrogen-Bonded Base Pair Surrogate in DNA
J.Am.Chem.Soc., 122, 2000
1E91
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Structure of the complex of the Mad1-Sin3B interaction domains
分子名称: MAD PROTEIN (MAX DIMERIZER), PAIRED AMPHIPATHIC HELIX PROTEIN SIN3B
著者Spronk, C.A.E.M, Tessari, M, Kaan, A.M, Jansen, J.F.A, Vermeulen, M, Stunnenberg, H.G, Vuister, G.W.
登録日2000-10-04
公開日2000-11-20
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献The MAD1-Sin3B Interaction Involves a Novel Helical Fold
Nat.Struct.Biol., 7, 2000
1IK1
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Solution Structure of an RNA Hairpin from HRV-14
分子名称: 5'-R(*GP*GP*UP*AP*CP*UP*AP*UP*GP*UP*AP*CP*CP*A)-3'
著者Huang, H, Alexandrov, A, Chen, X, Barnes III, T.W, Zhang, H, Dutta, K, Pascal, S.M.
登録日2001-05-01
公開日2001-07-18
最終更新日2024-05-01
実験手法SOLUTION NMR
主引用文献Structure of an RNA hairpin from HRV-14.
Biochemistry, 40, 2001
6ZX6
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Antiparallel basket-type G-quadruplex DNA structure formed in human Bcl-2 promoter containing 8-oxoG
分子名称: bcl2ex-oxoG19
著者Bielskute, S, Plavec, J, Podbevsek, P.
登録日2020-07-29
公開日2021-03-10
最終更新日2024-06-19
実験手法SOLUTION NMR
主引用文献Oxidative lesions modulate G-quadruplex stability and structure in the human BCL2 promoter.
Nucleic Acids Res., 49, 2021
6ZX7
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Antiparallel basket-type G-quadruplex DNA structure formed in human Bcl-2 promoter
分子名称: bcl2ex
著者Bielskute, S, Plavec, J, Podbevsek, P.
登録日2020-07-29
公開日2021-03-10
最終更新日2024-06-19
実験手法SOLUTION NMR
主引用文献Oxidative lesions modulate G-quadruplex stability and structure in the human BCL2 promoter.
Nucleic Acids Res., 49, 2021
5XNG
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EFK17A structure in Microgel MAA60
分子名称: Cathelicidin antimicrobial peptide
著者Datta, A, Bhunia, A.
登録日2017-05-22
公開日2018-04-18
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Conformational Aspects of High Content Packing of Antimicrobial Peptides in Polymer Microgels
ACS Appl Mater Interfaces, 9, 2017
5XRX
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EFK17DA structure in Microgel MAA60
分子名称: Cathelicidin antimicrobial peptide
著者Datta, A, Bhunia, A.
登録日2017-06-10
公開日2018-04-18
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Conformational Aspects of High Content Packing of Antimicrobial Peptides in Polymer Microgels
ACS Appl Mater Interfaces, 9, 2017
6V0L
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PDGFR-b Promoter Forms a G-Vacancy Quadruplex that Can be Complemented by dGMP: Molecular Structure and Recognition of Guanine Derivatives and Metabolites
分子名称: 2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE, DNA (5'-D(*(3D1)P*AP*GP*GP*GP*AP*GP*GP*GP*CP*GP*GP*CP*GP*GP*GP*AP*CP*A)-3')
著者Wang, K.B, Dickerhoff, J, Wu, G, Yang, D.
登録日2019-11-18
公開日2020-03-11
最終更新日2024-05-01
実験手法SOLUTION NMR
主引用文献PDGFR-beta Promoter Forms a Vacancy G-Quadruplex that Can Be Filled in by dGMP: Solution Structure and Molecular Recognition of Guanine Metabolites and Drugs.
J.Am.Chem.Soc., 142, 2020
6N8F
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RNA Duplex containing the internal loop 5'-GCUU/3'-UUCG
分子名称: RNA (5'-R(*CP*GP*CP*AP*GP*CP*UP*UP*AP*CP*GP*C)-3'), RNA (5'-R(*GP*CP*GP*UP*GP*CP*UP*UP*UP*GP*CP*G)-3')
著者Berger, K.D, Kennedy, S.D, Turner, D.H.
登録日2018-11-29
公開日2019-02-13
最終更新日2024-05-01
実験手法SOLUTION NMR
主引用文献Nuclear Magnetic Resonance Reveals That GU Base Pairs Flanking Internal Loops Can Adopt Diverse Structures.
Biochemistry, 58, 2019

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