PDB: 1980 件ウェブページステータス検索Chemie searchBIRD

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6XRE	Structure of the p53/RNA polymerase II assembly 分子名称: Cellular tumor antigen p53, DNA-directed RNA polymerase II subunit RPB1, DNA-directed RNA polymerase II subunit RPB11-a, ... 著者 Liou, S.-H, Singh, S, Singer, R.H, Coleman, R.A, Liu, W. 登録日 2020-07-12 公開日 2021-03-24 最終更新日 2024-03-06 実験手法 ELECTRON MICROSCOPY (4.6 Å) 主引用文献 Structure of the p53/RNA polymerase II assembly. Commun Biol, 4, 2021
8BYQ	RNA polymerase II pre-initiation complex with the proximal +1 nucleosome (PIC-Nuc10W) 分子名称: CDK-activating kinase assembly factor MAT1, Cyclin-H, Cyclin-dependent kinase 7, ... 著者 Abril-Garrido, J, Dienemann, C, Grabbe, F, Velychko, T, Lidschreiber, M, Wang, H, Cramer, P. 登録日 2022-12-14 公開日 2023-05-03 最終更新日 2024-07-24 実験手法 ELECTRON MICROSCOPY (4.1 Å) 主引用文献 Structural basis of transcription reduction by a promoter-proximal +1 nucleosome. Mol.Cell, 83, 2023
6EU0	RNA Polymerase III open pre-initiation complex (OC-PIC) 分子名称: DNA-directed RNA polymerase III subunit RPC1, DNA-directed RNA polymerase III subunit RPC10, DNA-directed RNA polymerase III subunit RPC2, ... 著者 Abascal-Palacios, G, Ramsay, E.P, Beuron, F, Morris, E, Vannini, A. 登録日 2017-10-27 公開日 2018-01-17 最終更新日 2024-05-15 実験手法 ELECTRON MICROSCOPY (4 Å) 主引用文献 Structural basis of RNA polymerase III transcription initiation. Nature, 553, 2018
6F44	RNA Polymerase III closed complex CC2. 分子名称: DNA-directed RNA polymerase III subunit RPC1, DNA-directed RNA polymerase III subunit RPC10, DNA-directed RNA polymerase III subunit RPC2, ... 著者 Vorlaender, M.K, Khatter, H, Wetzel, R, Hagen, W.J.H, Mueller, C.W. 登録日 2017-11-29 公開日 2018-01-17 最終更新日 2024-05-15 実験手法 ELECTRON MICROSCOPY (4.2 Å) 主引用文献 Molecular mechanism of promoter opening by RNA polymerase III. Nature, 553, 2018
5C4A	Crystal structure of a transcribing RNA Polymerase II complex reveals a complete transcription bubble 分子名称: DNA-directed RNA polymerase II subunit RPB1, DNA-directed RNA polymerase II subunit RPB11, DNA-directed RNA polymerase II subunit RPB2, ... 著者 Barnes, C.O, Calero, M, Malik, I, Saphr, H, Zhang, Q, Pullara, F, Kaplan, C.D, Calero, G. 登録日 2015-06-17 公開日 2015-08-26 最終更新日 2023-09-27 実験手法 X-RAY DIFFRACTION (4.2 Å) 主引用文献 Crystal Structure of a Transcribing RNA Polymerase II Complex Reveals a Complete Transcription Bubble. Mol.Cell, 59, 2015
5C4X	Crystal structure of a transcribing RNA Polymerase II complex reveals a complete transcription bubble 分子名称: DNA-directed RNA polymerase II subunit RPB1, DNA-directed RNA polymerase II subunit RPB11, DNA-directed RNA polymerase II subunit RPB2, ... 著者 Barnes, C.O, Calero, M, Malik, I, Spahr, H, Zhang, Q, Pullara, F, Kaplan, C.D, Calero, G. 登録日 2015-06-18 公開日 2015-08-26 最終更新日 2023-09-27 実験手法 X-RAY DIFFRACTION (4 Å) 主引用文献 Crystal Structure of a Transcribing RNA Polymerase II Complex Reveals a Complete Transcription Bubble. Mol.Cell, 59, 2015
5X4Z	RNA Polymerase II from Komagataella Pastoris (Type-1 crystal) 分子名称: DNA-directed RNA polymerase subunit, DNA-directed RNA polymerase subunit beta, RNA polymerase II subunit, ... 著者 Ehara, H, Umehara, T, Sekine, S, Yokoyama, S. 登録日 2017-02-14 公開日 2017-05-17 実験手法 X-RAY DIFFRACTION (7.8 Å) 主引用文献 Crystal structure of RNA polymerase II from Komagataella pastoris Biochem. Biophys. Res. Commun., 487, 2017
5XOG	RNA Polymerase II elongation complex bound with Spt5 KOW5 and Elf1 分子名称: DIPHOSPHOMETHYLPHOSPHONIC ACID ADENOSYL ESTER, DNA (30-MER), DNA (39-MER), ... 著者 Ehara, H, Shirouzu, M, Sekine, S. 登録日 2017-05-28 公開日 2017-08-16 最終更新日 2024-03-27 実験手法 X-RAY DIFFRACTION (3 Å) 主引用文献 Structure of the complete elongation complex of RNA polymerase II with basal factors Science, 357, 2017
7NVY	RNA polymerase II pre-initiation complex with closed promoter DNA in proximal position 分子名称: CDK-activating kinase assembly factor MAT1, DNA-directed RNA polymerase II subunit E, DNA-directed RNA polymerase II subunit F, ... 著者 Aibara, S, Schilbach, S, Cramer, P. 登録日 2021-03-16 公開日 2021-05-05 最終更新日 2024-07-10 実験手法 ELECTRON MICROSCOPY (7.3 Å) 主引用文献 Structures of mammalian RNA polymerase II pre-initiation complexes. Nature, 594, 2021
4V1N	Architecture of the RNA polymerase II-Mediator core transcription initiation complex 分子名称: DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB1, DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB11, DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB2, ... 著者 Plaschka, C, Lariviere, L, Wenzeck, L, Hemann, M, Tegunov, D, Petrotchenko, E.V, Borchers, C.H, Baumeister, W, Herzog, F, Villa, E, Cramer, P. 登録日 2014-09-29 公開日 2015-02-04 最終更新日 2024-05-08 実験手法 ELECTRON MICROSCOPY (7.8 Å) 主引用文献 Architecture of the RNA Polymerase II-Mediator Core Initiation Complex. Nature, 518, 2015
4V1O	Architecture of the RNA polymerase II-Mediator core transcription initiation complex 分子名称: DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB1, DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB11, DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB2, ... 著者 Plaschka, C, Lariviere, L, Wenzeck, L, Hemann, M, Tegunov, D, Petrotchenko, E.V, Borchers, C.H, Baumeister, W, Herzog, F, Villa, E, Cramer, P. 登録日 2014-09-29 公開日 2015-02-04 最終更新日 2024-05-08 実験手法 ELECTRON MICROSCOPY (9.7 Å) 主引用文献 Architecture of the RNA Polymerase II-Mediator Core Initiation Complex. Nature, 518, 2015
7B7U	Cryo-EM structure of mammalian RNA polymerase II in complex with human RPAP2 分子名称: DNA-directed RNA polymerase II subunit E, DNA-directed RNA polymerase II subunit F, DNA-directed RNA polymerase II subunit RPB3, ... 著者 Fianu, I, Dienemann, C, Aibara, S, Schilbach, S, Cramer, P. 登録日 2020-12-11 公開日 2021-05-19 最終更新日 2022-02-16 実験手法 ELECTRON MICROSCOPY (2.8 Å) 主引用文献 Cryo-EM structure of mammalian RNA polymerase II in complex with human RPAP2. Commun Biol, 4, 2021
8P4C	Structural insights into human co-transcriptional capping - structure 3 分子名称: DNA (32-MER), DNA (41-MER), DNA-directed RNA polymerase II subunit E, ... 著者 Garg, G, Dienemann, C, Farnung, L, Schwarz, J, Linden, A, Urlaub, H, Cramer, P. 登録日 2023-05-20 公開日 2023-08-16 実験手法 ELECTRON MICROSCOPY (3.8 Å) 主引用文献 Structural insights into human co-transcriptional capping. Mol.Cell, 83, 2023
8P4D	Structural insights into human co-transcriptional capping - structure 4 分子名称: DNA (32-MER), DNA (41-MER), DNA-directed RNA polymerase II subunit E, ... 著者 Garg, G, Dienemann, C, Farnung, L, Schwarz, J, Linden, A, Urlaub, H, Cramer, P. 登録日 2023-05-20 公開日 2023-08-16 実験手法 ELECTRON MICROSCOPY (3.6 Å) 主引用文献 Structural insights into human co-transcriptional capping. Mol.Cell, 83, 2023
7O4J	Yeast RNA polymerase II transcription pre-initiation complex (consensus) 分子名称: ADENOSINE-5'-DIPHOSPHATE, BERYLLIUM TRIFLUORIDE ION, DNA-directed RNA polymerase II subunit RPB1, ... 著者 Schilbach, S, Aibara, S, Dienemann, C, Grabbe, F, Cramer, P. 登録日 2021-04-06 公開日 2021-06-16 最終更新日 2024-07-10 実験手法 ELECTRON MICROSCOPY (2.9 Å) 主引用文献 Structure of RNA polymerase II pre-initiation complex at 2.9 angstrom defines initial DNA opening. Cell, 184, 2021
7O4I	Yeast RNA polymerase II transcription pre-initiation complex with initial transcription bubble 分子名称: ADENOSINE-5'-DIPHOSPHATE, BERYLLIUM TRIFLUORIDE ION, DNA-directed RNA polymerase II subunit RPB1, ... 著者 Schilbach, S, Aibara, S, Dienemann, C, Grabbe, F, Cramer, P. 登録日 2021-04-06 公開日 2021-06-16 最終更新日 2024-07-10 実験手法 ELECTRON MICROSCOPY (3.2 Å) 主引用文献 Structure of RNA polymerase II pre-initiation complex at 2.9 angstrom defines initial DNA opening. Cell, 184, 2021
7O75	Yeast RNA polymerase II transcription pre-initiation complex with open promoter DNA 分子名称: ADENOSINE-5'-DIPHOSPHATE, BERYLLIUM TRIFLUORIDE ION, DNA-directed RNA polymerase II subunit RPB1, ... 著者 Schilbach, S, Aibara, S, Dienemann, C, Grabbe, F, Cramer, P. 登録日 2021-04-13 公開日 2021-06-16 最終更新日 2024-07-10 実験手法 ELECTRON MICROSCOPY (3.2 Å) 主引用文献 Structure of RNA polymerase II pre-initiation complex at 2.9 angstrom defines initial DNA opening. Cell, 184, 2021
7O73	Yeast RNA polymerase II transcription pre-initiation complex with closed distorted promoter DNA 分子名称: ADENOSINE-5'-DIPHOSPHATE, BERYLLIUM TRIFLUORIDE ION, DNA-directed RNA polymerase II subunit RPB1, ... 著者 Schilbach, S, Aibara, S, Dienemann, C, Grabbe, F, Cramer, P. 登録日 2021-04-12 公開日 2021-06-16 最終更新日 2024-07-10 実験手法 ELECTRON MICROSCOPY (3.4 Å) 主引用文献 Structure of RNA polymerase II pre-initiation complex at 2.9 angstrom defines initial DNA opening. Cell, 184, 2021
7O72	Yeast RNA polymerase II transcription pre-initiation complex with closed promoter DNA 分子名称: ADENOSINE-5'-DIPHOSPHATE, BERYLLIUM TRIFLUORIDE ION, DNA-directed RNA polymerase II subunit RPB1, ... 著者 Schilbach, S, Aibara, S, Dienemann, C, Grabbe, F, Cramer, P. 登録日 2021-04-12 公開日 2021-06-16 最終更新日 2024-07-10 実験手法 ELECTRON MICROSCOPY (3.4 Å) 主引用文献 Structure of RNA polymerase II pre-initiation complex at 2.9 angstrom defines initial DNA opening. Cell, 184, 2021
4V1M	Architecture of the RNA polymerase II-Mediator core transcription initiation complex 分子名称: 5'-D(*AP*AP*GP*TP*AP*CP*TP*TP*GP*AP)-3', 5'-D(*CP*CP*AP*GP*GP*AP)-3', 5'-D(*TP*CP*AP*AP*GP*TP*AP*CP*TP*TP*TP*TP*TP*CP *CP*BRUP*GP*GP*TP*C)-3', ... 著者 Plaschka, C, Lariviere, L, Wenzeck, L, Hemann, M, Tegunov, D, Petrotchenko, E.V, Borchers, C.H, Baumeister, W, Herzog, F, Villa, E, Cramer, P. 登録日 2014-09-29 公開日 2015-02-04 最終更新日 2024-05-08 実験手法 ELECTRON MICROSCOPY (6.6 Å) 主引用文献 Architecture of the RNA Polymerase II-Mediator Core Initiation Complex. Nature, 518, 2015
8P4B	Structural insights into human co-transcriptional capping - structure 2 分子名称: DNA (35-MER), DNA (5'-D(P*AP*GP*CP*GP*GP*CP*GP*GP*AP*GP*CP*CP*AP*GP*CP*AP*GP*GP*GP*AP*GP*CP*TP*G)-3'), DNA-directed RNA polymerase II subunit E, ... 著者 Garg, G, Dienemann, C, Farnung, L, Schwarz, J, Linden, A, Urlaub, H, Cramer, P. 登録日 2023-05-20 公開日 2023-08-16 実験手法 ELECTRON MICROSCOPY (3.2 Å) 主引用文献 Structural insights into human co-transcriptional capping. Mol.Cell, 83, 2023
8H0W	RNA polymerase II transcribing a chromatosome (type II) 分子名称: DNA (261-MER), DNA-directed RNA polymerase subunit, DNA-directed RNA polymerase subunit beta, ... 著者 Hirano, R, Ehara, H, Tomoya, K, Takizawa, Y, Sekine, S, Kurumizaka, H. 登録日 2022-09-30 公開日 2022-12-07 最終更新日 2024-07-03 実験手法 ELECTRON MICROSCOPY (4.6 Å) 主引用文献 Structural basis of RNA polymerase II transcription on the chromatosome containing linker histone H1. Nat Commun, 13, 2022
8H0V	RNA polymerase II transcribing a chromatosome (type I) 分子名称: DNA (261-MER), DNA-directed RNA polymerase subunit, DNA-directed RNA polymerase subunit beta, ... 著者 Hirano, R, Ehara, H, Tomoya, K, Takizawa, Y, Sekine, S, Kurumizaka, H. 登録日 2022-09-30 公開日 2022-12-07 最終更新日 2024-07-03 実験手法 ELECTRON MICROSCOPY (3.8 Å) 主引用文献 Structural basis of RNA polymerase II transcription on the chromatosome containing linker histone H1. Nat Commun, 13, 2022
8P4A	Structural insights into human co-transcriptional capping - structure 1 分子名称: DNA (29-MER), DNA (38-MER), DNA-directed RNA polymerase II subunit E, ... 著者 Garg, G, Dienemann, C, Farnung, L, Schwarz, J, Linden, A, Urlaub, H, Cramer, P. 登録日 2023-05-20 公開日 2023-08-16 実験手法 ELECTRON MICROSCOPY (3.6 Å) 主引用文献 Structural insights into human co-transcriptional capping. Mol.Cell, 83, 2023
8HE5	RNA polymerase II elongation complex bound with Rad26 and Elf1, stalled at SHL(-3.5) of the nucleosome 分子名称: DNA (198-MER), DNA repair protein, DNA-directed RNA polymerase subunit, ... 著者 Osumi, K, Kujirai, T, Ehara, H, Kinoshita, C, Saotome, M, Kagawa, W, Sekine, S, Takizawa, Y, Kurumizaka, H. 登録日 2022-11-07 公開日 2023-07-05 最終更新日 2024-07-03 実験手法 ELECTRON MICROSCOPY (6.95 Å) 主引用文献 Structural Basis of Damaged Nucleotide Recognition by Transcribing RNA Polymerase II in the Nucleosome. J.Mol.Biol., 435, 2023

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