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6GQB
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BU of 6gqb by Molmil
Cryo-EM reconstruction of yeast 80S ribosome in complex with mRNA, tRNA and eEF2 (GDP+AlF4/sordarin)
分子名称: 18S ribosomal RNA, 40S ribosomal protein S0-A, 40S ribosomal protein S1-A, ...
著者Pellegrino, S, Yusupov, M, Yusupova, G, Hashem, Y.
登録日2018-06-07
公開日2018-07-11
最終更新日2021-08-04
実験手法ELECTRON MICROSCOPY (3.9 Å)
主引用文献Structural Insights into the Role of Diphthamide on Elongation Factor 2 in mRNA Reading-Frame Maintenance.
J. Mol. Biol., 430, 2018
6GQ1
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BU of 6gq1 by Molmil
Cryo-EM reconstruction of yeast 80S ribosome in complex with mRNA, tRNA and eEF2 (GMPPCP/sordarin)
分子名称: 18S ribosomal RNA, 40S ribosomal protein S0-A, 40S ribosomal protein S1-A, ...
著者Pellegrino, S, Demeshkina, N, Mancera-Martinez, E, Melnikov, S, Simonetti, A, Myasnikov, A, Yusupov, M, Yusupova, G, Hashem, Y.
登録日2018-06-07
公開日2018-07-11
最終更新日2018-08-08
実験手法ELECTRON MICROSCOPY (4.4 Å)
主引用文献Structural Insights into the Role of Diphthamide on Elongation Factor 2 in mRNA Reading-Frame Maintenance.
J. Mol. Biol., 430, 2018
6GP1
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BU of 6gp1 by Molmil
Structure of mEos4b in the red long-lived dark state
分子名称: Green to red photoconvertible GFP-like protein EosFP
著者De Zitter, E, Adam, V, Byrdin, M, Van Meervelt, L, Dedecker, P, Bourgeois, D.
登録日2018-06-04
公開日2019-05-22
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.504 Å)
主引用文献Mechanistic investigation of mEos4b reveals a strategy to reduce track interruptions in sptPALM.
Nat.Methods, 16, 2019
6GP0
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Structure of mEos4b in the red fluorescent state
分子名称: Green to red photoconvertible GFP-like protein EosFP
著者De Zitter, E, Adam, V, Byrdin, M, Van Meervelt, L, Dedecker, P, Bourgeois, D.
登録日2018-06-04
公開日2019-05-22
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Mechanistic investigation of mEos4b reveals a strategy to reduce track interruptions in sptPALM.
Nat.Methods, 16, 2019
6GOZ
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BU of 6goz by Molmil
Structure of mEos4b in the green long-lived dark state
分子名称: 1,2-ETHANEDIOL, DI(HYDROXYETHYL)ETHER, GLYCEROL, ...
著者De Zitter, E, Adam, V, Byrdin, M, Van Meervelt, L, Dedecker, P, Bourgeois, D.
登録日2018-06-04
公開日2019-11-13
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2.406 Å)
主引用文献Mechanistic Investigations of Green mEos4b Reveal a Dynamic Long-Lived Dark State.
J.Am.Chem.Soc., 2020
6GOY
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BU of 6goy by Molmil
Structure of mEos4b in the green fluorescent state
分子名称: 1,2-ETHANEDIOL, DI(HYDROXYETHYL)ETHER, GLYCEROL, ...
著者De Zitter, E, Adam, V, Byrdin, M, Van Meervelt, L, Dedecker, P, Bourgeois, D.
登録日2018-06-04
公開日2019-05-22
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献Mechanistic investigation of mEos4b reveals a strategy to reduce track interruptions in sptPALM.
Nat.Methods, 16, 2019
6GO9
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BU of 6go9 by Molmil
Structure of GFPmut2 crystallized at pH 6 and transferred to pH 7
分子名称: (4R)-2-METHYLPENTANE-2,4-DIOL, (4S)-2-METHYL-2,4-PENTANEDIOL, Green fluorescent protein
著者Lolli, G, Raboni, S, Pasqualetto, E, Campanini, B, Mozzarelli, A, Bettati, S, Battistutta, R.
登録日2018-06-01
公開日2018-12-19
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.672 Å)
主引用文献Insight into GFPmut2 pH Dependence by Single Crystal Microspectrophotometry and X-ray Crystallography.
J.Phys.Chem.B, 122, 2018
6GO8
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Structure of GFPmut2 crystallized at pH 6
分子名称: (4R)-2-METHYLPENTANE-2,4-DIOL, (4S)-2-METHYL-2,4-PENTANEDIOL, Green fluorescent protein
著者Lolli, G, Raboni, S, Pasqualetto, E, Campanini, B, Mozzarelli, A, Bettati, S, Battistutta, R.
登録日2018-06-01
公開日2018-12-19
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.648 Å)
主引用文献Insight into GFPmut2 pH Dependence by Single Crystal Microspectrophotometry and X-ray Crystallography.
J.Phys.Chem.B, 122, 2018
6GFP
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BU of 6gfp by Molmil
cyanobacterial GAPDH with NADP bound
分子名称: FORMIC ACID, Glyceraldehyde-3-phosphate dehydrogenase, MAGNESIUM ION, ...
著者McFarlane, C.R, Briggs, L, Murray, J.W.
登録日2018-05-01
公開日2019-05-08
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.54 Å)
主引用文献Structural basis of light-induced redox regulation in the Calvin-Benson cycle in cyanobacteria.
Proc.Natl.Acad.Sci.USA, 116, 2019
6GEZ
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BU of 6gez by Molmil
THE STRUCTURE OF TWITCH-2B N532F
分子名称: CALCIUM ION, FORMIC ACID, Green fluorescent protein,Optimized Ratiometric Calcium Sensor,Green fluorescent protein,Green fluorescent protein
著者Trigo Mourino, P, Paulat, M, Thestrup, T, Griesbeck, O, Griesinger, C, Becker, S.
登録日2018-04-27
公開日2019-08-21
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2.47 Å)
主引用文献Dynamic tuning of FRET in a green fluorescent protein biosensor.
Sci Adv, 5, 2019
6GEL
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BU of 6gel by Molmil
The structure of TWITCH-2B
分子名称: CALCIUM ION, FORMIC ACID, GLYCEROL, ...
著者Trigo Mourino, P, Paulat, M, Thestrup, T, Griesbeck, O, Griesinger, C, Becker, S.
登録日2018-04-26
公開日2019-08-21
最終更新日2019-09-11
実験手法X-RAY DIFFRACTION (2.51 Å)
主引用文献Dynamic tuning of FRET in a green fluorescent protein biosensor.
Sci Adv, 5, 2019
6G7Q
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BU of 6g7q by Molmil
Trichodesmium Tery_3377 (IdiA) (FutA) in complex with iron and citrate ligands.
分子名称: CHLORIDE ION, CITRATE ANION, Extracellular solute-binding protein, ...
著者Machelett, M.M, Tews, I.
登録日2018-04-06
公開日2018-09-12
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (1.2 Å)
主引用文献Structural and functional characterization of IdiA/FutA (Tery_3377), an iron-binding protein from the ocean diazotrophTrichodesmium erythraeum.
J. Biol. Chem., 293, 2018
6G7P
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BU of 6g7p by Molmil
Trichodesmium Tery_3377 (IdiA) (FutA) with iron and water ligands.
分子名称: CHLORIDE ION, Extracellular solute-binding protein, family 1, ...
著者Machelett, M.M, Tews, I.
登録日2018-04-06
公開日2018-09-12
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Structural and functional characterization of IdiA/FutA (Tery_3377), an iron-binding protein from the ocean diazotrophTrichodesmium erythraeum.
J. Biol. Chem., 293, 2018
6G7N
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BU of 6g7n by Molmil
Trichodesmium Tery_3377 (IdiA) (FutA) with iron and alanine ligand.
分子名称: D-ALANINE, D-GLUTAMIC ACID, Extracellular solute-binding protein, ...
著者Machelett, M.M, Tews, I.
登録日2018-04-06
公開日2018-09-12
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (1.1 Å)
主引用文献Structural and functional characterization of IdiA/FutA (Tery_3377), an iron-binding protein from the ocean diazotrophTrichodesmium erythraeum.
J. Biol. Chem., 293, 2018
6G5I
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BU of 6g5i by Molmil
Cryo-EM structure of a late human pre-40S ribosomal subunit - State R
分子名称: 18S ribosomal RNA, 40S ribosomal protein S10, 40S ribosomal protein S11, ...
著者Ameismeier, M, Cheng, J, Berninghausen, O, Beckmann, R.
登録日2018-03-29
公開日2018-06-06
最終更新日2024-05-15
実験手法ELECTRON MICROSCOPY (3.5 Å)
主引用文献Visualizing late states of human 40S ribosomal subunit maturation.
Nature, 558, 2018
6G5H
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BU of 6g5h by Molmil
Cryo-EM structure of a late human pre-40S ribosomal subunit - Mature
分子名称: 18S ribosomal RNA, 40S ribosomal protein S10, 40S ribosomal protein S11, ...
著者Ameismeier, M, Cheng, J, Berninghausen, O, Beckmann, R.
登録日2018-03-29
公開日2018-06-06
最終更新日2024-05-15
実験手法ELECTRON MICROSCOPY (3.6 Å)
主引用文献Visualizing late states of human 40S ribosomal subunit maturation.
Nature, 558, 2018
6G53
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BU of 6g53 by Molmil
Cryo-EM structure of a late human pre-40S ribosomal subunit - State E
分子名称: 18S ribosomal RNA, 40S ribosomal protein S10, 40S ribosomal protein S11, ...
著者Ameismeier, M, Cheng, J, Berninghausen, O, Beckmann, R.
登録日2018-03-28
公開日2018-06-06
最終更新日2024-05-15
実験手法ELECTRON MICROSCOPY (4.5 Å)
主引用文献Visualizing late states of human 40S ribosomal subunit maturation.
Nature, 558, 2018
6G51
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BU of 6g51 by Molmil
Cryo-EM structure of a late human pre-40S ribosomal subunit - State D
分子名称: 18S ribosomal RNA, 40S ribosomal protein S10, 40S ribosomal protein S11, ...
著者Ameismeier, M, Cheng, J, Berninghausen, O, Beckmann, R.
登録日2018-03-28
公開日2018-06-06
最終更新日2024-05-15
実験手法ELECTRON MICROSCOPY (4.1 Å)
主引用文献Visualizing late states of human 40S ribosomal subunit maturation.
Nature, 558, 2018
6G4W
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BU of 6g4w by Molmil
Cryo-EM structure of a late human pre-40S ribosomal subunit - State A
分子名称: 18S ribosomal RNA, 40S ribosomal protein S11, 40S ribosomal protein S13, ...
著者Ameismeier, M, Cheng, J, Berninghausen, O, Beckmann, R.
登録日2018-03-28
公開日2018-06-06
最終更新日2024-05-15
実験手法ELECTRON MICROSCOPY (4.5 Å)
主引用文献Visualizing late states of human 40S ribosomal subunit maturation.
Nature, 558, 2018
6G4S
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BU of 6g4s by Molmil
Cryo-EM structure of a late human pre-40S ribosomal subunit - State B
分子名称: 40S ribosomal protein S11, 40S ribosomal protein S13, 40S ribosomal protein S14, ...
著者Ameismeier, M, Cheng, J, Berninghausen, O, Beckmann, R.
登録日2018-03-28
公開日2018-06-06
最終更新日2024-05-15
実験手法ELECTRON MICROSCOPY (4 Å)
主引用文献Visualizing late states of human 40S ribosomal subunit maturation.
Nature, 558, 2018
6G18
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BU of 6g18 by Molmil
Cryo-EM structure of a late human pre-40S ribosomal subunit - State C
分子名称: 40S ribosomal protein S11, 40S ribosomal protein S12, 40S ribosomal protein S13, ...
著者Ameismeier, M, Cheng, J, Berninghausen, O, Beckmann, R.
登録日2018-03-20
公開日2018-06-06
最終更新日2024-05-15
実験手法ELECTRON MICROSCOPY (3.6 Å)
主引用文献Visualizing late states of human 40S ribosomal subunit maturation.
Nature, 558, 2018
6FYY
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BU of 6fyy by Molmil
Structure of a partial yeast 48S preinitiation complex with eIF5 N-terminal domain (model C2)
分子名称: 18S ribosomal RNA, 40S ribosomal protein S0, 40S ribosomal protein S1, ...
著者Llacer, J.L, Hussain, T, Gordiyenko, Y, Ramakrishnan, V.
登録日2018-03-12
公開日2018-12-05
最終更新日2024-04-24
実験手法ELECTRON MICROSCOPY (3.02 Å)
主引用文献Translational initiation factor eIF5 replaces eIF1 on the 40S ribosomal subunit to promote start-codon recognition.
Elife, 7, 2018
6FYX
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BU of 6fyx by Molmil
Structure of a partial yeast 48S preinitiation complex with eIF5 N-terminal domain (model C1)
分子名称: 18S ribosomal RNA, 40S ribosomal protein S0, 40S ribosomal protein S1, ...
著者Llacer, J.L, Hussain, T, Gordiyenko, Y, Ramakrishnan, V.
登録日2018-03-12
公開日2018-12-05
最終更新日2024-04-24
実験手法ELECTRON MICROSCOPY (3.5 Å)
主引用文献Translational initiation factor eIF5 replaces eIF1 on the 40S ribosomal subunit to promote start-codon recognition.
Elife, 7, 2018
6FWW
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BU of 6fww by Molmil
GFP/KKK. A redesigned GFP with improved solubility
分子名称: Green fluorescent protein
著者Varejao, N, Lascorz, J, Gil-Garcia, M, Diaz-Caballero, M, Navarro, S, Ventura, S, Reverter, D.
登録日2018-03-07
公開日2018-08-01
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.131 Å)
主引用文献Combining Structural Aggregation Propensity and Stability Predictions To Redesign Protein Solubility.
Mol. Pharm., 15, 2018
6FSQ
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BU of 6fsq by Molmil
Structure of A3_bGFPD, an artificial bi-domain protein based on two different alphaRep domains : A3 and a GFP binding domain (bGFPD)
分子名称: MALONATE ION, SODIUM ION, alphaRep A3_bGFPD
著者Li de la Sierra-Gallay, I, Leger, C.
登録日2018-02-20
公開日2018-08-08
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2.79 Å)
主引用文献Ligand-induced conformational switch in an artificial bidomain protein scaffold.
Sci Rep, 9, 2019

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