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6ZX6
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Antiparallel basket-type G-quadruplex DNA structure formed in human Bcl-2 promoter containing 8-oxoG
分子名称: bcl2ex-oxoG19
著者Bielskute, S, Plavec, J, Podbevsek, P.
登録日2020-07-29
公開日2021-03-10
最終更新日2024-06-19
実験手法SOLUTION NMR
主引用文献Oxidative lesions modulate G-quadruplex stability and structure in the human BCL2 promoter.
Nucleic Acids Res., 49, 2021
6ZX7
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BU of 6zx7 by Molmil
Antiparallel basket-type G-quadruplex DNA structure formed in human Bcl-2 promoter
分子名称: bcl2ex
著者Bielskute, S, Plavec, J, Podbevsek, P.
登録日2020-07-29
公開日2021-03-10
最終更新日2024-06-19
実験手法SOLUTION NMR
主引用文献Oxidative lesions modulate G-quadruplex stability and structure in the human BCL2 promoter.
Nucleic Acids Res., 49, 2021
7CV3
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BU of 7cv3 by Molmil
Quadruplex-duplex hybrid structure in the PIM1 gene, Form 1
分子名称: PIM1 promoter, Form 1
著者Winnerdy, F.R, Tan, D.J.Y, Lim, K.W, Phan, A.T.
登録日2020-08-25
公開日2020-10-07
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Coexistence of two quadruplex-duplex hybrids in the PIM1 gene.
Nucleic Acids Res., 48, 2020
7CJW
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BU of 7cjw by Molmil
Solution structure of monomeric superoxide dismutase 1 with an additional mutation H46W in a crowded environment
分子名称: Monomeric Human Cu,Zn Superoxide dismutase
著者Iwakawa, N, Morimoto, D, Walinda, E, Danielsson, J, Shirakawa, M, Sugase, K.
登録日2020-07-14
公開日2021-05-26
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Transient Diffusive Interactions with a Protein Crowder Affect Aggregation Processes of Superoxide Dismutase 1 beta-Barrel.
J.Phys.Chem.B, 125, 2021
7CG1
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BU of 7cg1 by Molmil
Solution structure of the sensor domain of the anti-sigma factor RsgI4 in Pseudobacteroides cellulosolvens
分子名称: Anti-sigma factor RsgI, N-terminal
著者Dong, S, Feng, Y.
登録日2020-06-30
公開日2021-06-30
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Structure of the sensor domain of the anti-sigma factor RsgI4 in Pseudobacteroides cellulosolvens
To Be Published
7ELK
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BU of 7elk by Molmil
Solution structure of Terfa derived from Danio rerio
分子名称: Terfa protein
著者Yun, J.H, Kim, M, Lee, W.
登録日2021-04-11
公開日2022-04-13
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Solution structure of Terfa derived from Danio rerio
To Be Published
7ELJ
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BU of 7elj by Molmil
Prion Derived Tetrapeptide Stabilizes Thermolabile Insulin via Conformational Trapping
分子名称: IS1, Insulin A Chain, Insulin B chain
著者Banerjee, N.
登録日2021-04-11
公開日2021-04-28
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Prion-derived tetrapeptide stabilizes thermolabile insulin via conformational trapping.
Iscience, 24, 2021
7BWI
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BU of 7bwi by Molmil
Solution structure of recombinant APETx1
分子名称: Kappa-actitoxin-Ael2a
著者Matsumura, K, Kobayashi, N, Kurita, J, Nishimura, Y, Yokogawa, M, Imai, S, Shimada, I, Osawa, M.
登録日2020-04-14
公開日2020-12-23
最終更新日2021-07-14
実験手法SOLUTION NMR
主引用文献Mechanism of hERG inhibition by gating-modifier toxin, APETx1, deduced by functional characterization.
Bmc Mol Cell Biol, 22, 2021
1L1M
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BU of 1l1m by Molmil
SOLUTION STRUCTURE OF A DIMER OF LAC REPRESSOR DNA-BINDING DOMAIN COMPLEXED TO ITS NATURAL OPERATOR O1
分子名称: 5'-D(*AP*AP*AP*TP*TP*GP*TP*TP*AP*TP*CP*CP*GP*CP*TP*CP*AP*CP*AP*AP*TP*TP*C)-3', 5'-D(*GP*AP*AP*TP*TP*GP*TP*GP*AP*GP*CP*GP*GP*AP*TP*AP*AP*CP*AP*AP*TP*TP*T)-3', Lactose operon repressor
著者Kalodimos, C.G, Bonvin, A.M.J.J, Salinas, R.K, Wechselberger, R, Boelens, R, Kaptein, R.
登録日2002-02-19
公開日2002-06-26
最終更新日2021-10-27
実験手法SOLUTION NMR
主引用文献Plasticity in protein-DNA recognition: lac repressor interacts with its natural operator 01 through alternative conformations of its DNA-binding domain.
EMBO J., 21, 2002
7CV4
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BU of 7cv4 by Molmil
Quadruplex-duplex hybrid structure in the PIM1 gene, Form 2
分子名称: DNA (26-MER)
著者Winnerdy, F.R, Tan, D.T.J, Lim, K.W, Phan, A.T.
登録日2020-08-25
公開日2020-10-07
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Coexistence of two quadruplex-duplex hybrids in the PIM1 gene.
Nucleic Acids Res., 48, 2020
6GWM
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BU of 6gwm by Molmil
Solution structure of rat RIP2 caspase recruitment domain
分子名称: Receptor-interacting serine/threonine-protein kinase 2
著者Mineev, K.S, Goncharuk, S.A, Artemieva, L.E, Arseniev, A.S.
登録日2018-06-25
公開日2018-10-31
最終更新日2024-06-19
実験手法SOLUTION NMR
主引用文献CARD domain of rat RIP2 kinase: Refolding, solution structure, pH-dependent behavior and protein-protein interactions.
PLoS ONE, 13, 2018
7FB8
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BU of 7fb8 by Molmil
De Novo-Designed and Disulfide-Bridged Peptide Heterodimer - hd1
分子名称: ASP-ASP-LYS-ASP-CYS-ASP-GLU-TYR-CYS-LYS-LYS-THR-LYS-GLU-NH2, GLU-LE1-THR-GLY-HIS-ILE-GLU-GLY-PRO-THR-LE1-THR-LE1-HIS-CYS-LYS-NH2
著者Yao, H, Yao, S, Zheng, Y, Moyer, A, Baker, D, Wu, C.
登録日2021-07-08
公開日2022-05-18
最終更新日2023-11-15
実験手法SOLUTION NMR
主引用文献De novo design and directed folding of disulfide-bridged peptide heterodimers.
Nat Commun, 13, 2022
7FBA
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BU of 7fba by Molmil
De Novo-Designed and Disulfide-Bridged Peptide Heterodimer - hd2
分子名称: ALA-LE1-CYS-GLU-CYS-GLY-PRO-THR-ARG-GLU-CYS-LYS-NH2, GLU-CYS-ARG-GLU-TYR-GLY-PRO-LE1-LYS-LE1-LE1-ALA-NH2
著者Yao, H, Yao, S, Moyer, A, Zheng, Y, Baker, D, Wu, C.
登録日2021-07-08
公開日2022-05-18
最終更新日2023-11-15
実験手法SOLUTION NMR
主引用文献De novo design and directed folding of disulfide-bridged peptide heterodimers.
Nat Commun, 13, 2022
6KBV
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BU of 6kbv by Molmil
Three-dimensional cytoplasmic membrane-bound structure of VG16KRKP-KYE28
分子名称: Heparin cofactor 2, VG16KRKP
著者Ilyas, H, Bhunia, A.
登録日2019-06-26
公開日2019-08-14
最終更新日2024-05-01
実験手法SOLUTION NMR
主引用文献Structural insights into the combinatorial effects of antimicrobial peptides reveal a role of aromatic-aromatic interactions in antibacterial synergism.
J.Biol.Chem., 294, 2019
7F32
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BU of 7f32 by Molmil
Ny-Hydroxyasparagine: A Multifunctional Unnatural Amino Acid That is a Good P1 Substrate of Asparaginyl Peptide Ligases
分子名称: SYCNCLCRRGVCRCICTI
著者Xia, Y, Liu, C.F.
登録日2021-06-15
公開日2022-09-07
実験手法SOLUTION NMR
主引用文献N gamma-Hydroxyasparagine: A Multifunctional Unnatural Amino Acid That is a Good P1 Substrate of Asparaginyl Peptide Ligases.
Angew.Chem.Int.Ed.Engl., 60, 2021
7D11
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BU of 7d11 by Molmil
Solution structure of a WKRY DNA-binding domain
分子名称: WRKY transcription factor 1, ZINC ION
著者Li, Q.W, Hu, Y.F, Jin, C.W.
登録日2020-09-12
公開日2021-09-15
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Structure of a WKRY DNA-binding domain
To Be Published
7DEH
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BU of 7deh by Molmil
Solution structure of cecropin P1 in dodecylphosphocholine micelles
分子名称: Cecropin-P1
著者Gu, H, Kumeta, H, Aizawa, T.
登録日2020-11-04
公開日2021-11-17
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Three-Dimensional Structure of the Antimicrobial Peptide Cecropin P1 in Dodecylphosphocholine Micelles and the Role of the C-Terminal Residues
Acs Omega, 7, 2022
7EUC
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BU of 7euc by Molmil
Parallel G-quadruplex structure
分子名称: DNA (5'-D(*TP*TP*GP*GP*GP*G)-3'), DNA (5'-D(P*GP*GP*GP*G)-3'), DNA (5'-D(P*GP*GP*GP*GP*T)-3'), ...
著者Winnerdy, F.R, Devi, G, Ang, J.C.Y, Lim, K.W, Phan, A.T.
登録日2021-05-17
公開日2022-03-30
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Four-Layered Intramolecular Parallel G-Quadruplex with Non-Nucleotide Loops: An Ultra-Stable Self-Folded DNA Nano-Scaffold.
Acs Nano, 16, 2022
6TRI
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BU of 6tri by Molmil
CI-MOR repressor-antirepressor complex of the temperate bacteriophage TP901-1 from Lactococcus lactis
分子名称: CI, MOR, SULFATE ION
著者Rasmussen, K.K, Blackledge, M, Herrmann, T, Jensen, M.R, Lo Leggio, L.
登録日2019-12-18
公開日2020-08-19
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (2.277 Å)
主引用文献Revealing the mechanism of repressor inactivation during switching of a temperate bacteriophage.
Proc.Natl.Acad.Sci.USA, 117, 2020
5XNG
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BU of 5xng by Molmil
EFK17A structure in Microgel MAA60
分子名称: Cathelicidin antimicrobial peptide
著者Datta, A, Bhunia, A.
登録日2017-05-22
公開日2018-04-18
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Conformational Aspects of High Content Packing of Antimicrobial Peptides in Polymer Microgels
ACS Appl Mater Interfaces, 9, 2017
8OIL
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BU of 8oil by Molmil
Plasmodium falciparum circumsporozoite protein C-terminal domain
分子名称: Circumsporozoite protein
著者Sterckx, Y.G.-J, Volkov, A.N, Geens, R.
登録日2023-03-23
公開日2024-02-28
実験手法SOLUTION NMR, SOLUTION SCATTERING
主引用文献Plasmodium falciparum circumsporozoite protein C-terminal domain
To Be Published
6L6V
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BU of 6l6v by Molmil
SPO1 Gp44 N-terminal region (1-55)
分子名称: E3 protein
著者Liu, B, Wang, Z.
登録日2019-10-29
公開日2021-05-05
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献A Bacteriophage DNA Mimic Protein Employs a Non-specific Strategy to Inhibit the Bacterial RNA Polymerase.
Front Microbiol, 12, 2021
5XRX
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BU of 5xrx by Molmil
EFK17DA structure in Microgel MAA60
分子名称: Cathelicidin antimicrobial peptide
著者Datta, A, Bhunia, A.
登録日2017-06-10
公開日2018-04-18
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Conformational Aspects of High Content Packing of Antimicrobial Peptides in Polymer Microgels
ACS Appl Mater Interfaces, 9, 2017
8K2S
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BU of 8k2s by Molmil
The structure of HtpG M domain in complex with unstructured D131D binding site a
分子名称: Disordered protein (D131D), Molecular chaperone HtpG (Fragment)
著者Qu, X, Huang, C.
登録日2023-07-13
公開日2024-06-26
最終更新日2024-07-03
実験手法SOLUTION NMR
主引用文献Structural basis for the dynamic chaperoning of disordered clients by Hsp90.
Nat.Struct.Mol.Biol., 2024
8K2R
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BU of 8k2r by Molmil
The structure of HtpG M domain in complex with unstructured D131D binding site b
分子名称: Disordered protein(D131D), Molecular chaperone HtpG (Fragment)
著者Qu, X, Huang, C.
登録日2023-07-13
公開日2024-06-26
最終更新日2024-07-03
実験手法SOLUTION NMR
主引用文献Structural basis for the dynamic chaperoning of disordered clients by Hsp90.
Nat.Struct.Mol.Biol., 2024

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件を2024-07-10に公開中

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