Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

2BWV
DownloadVisualize
BU of 2bwv by Molmil
His361Ala Escherichia coli Aminopeptidase P
分子名称: AMINOPEPTIDASE P, CHLORIDE ION, MANGANESE (II) ION
著者Graham, S.C, Guss, J.M.
登録日2005-07-19
公開日2006-01-25
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Kinetic and Crystallographic Analysis of Mutant Escherichia Coli Aminopeptidase P: Insights Into Substrate Recognition and the Mechanism of Catalysis.
Biochemistry, 45, 2006
6A4P
DownloadVisualize
BU of 6a4p by Molmil
HEWL crystals soaked in 2.5M GuHCl for 40 minutes
分子名称: CHLORIDE ION, GUANIDINE, Lysozyme C, ...
著者Tushar, R, Kini, R.M, Koh, C.Y, Hosur, M.V.
登録日2018-06-20
公開日2019-03-13
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.76 Å)
主引用文献X-ray crystallographic analysis of time-dependent binding of guanidine hydrochloride to HEWL: First steps during protein unfolding.
Int. J. Biol. Macromol., 122, 2019
8TRG
DownloadVisualize
BU of 8trg by Molmil
Structure of full-length LexA bound to a RecA filament
分子名称: DNA (27-MER), LexA repressor, MAGNESIUM ION, ...
著者Cory, M.B, Li, A, Kohli, R.M.
登録日2023-08-09
公開日2023-11-15
最終更新日2024-05-29
実験手法ELECTRON MICROSCOPY (2.93 Å)
主引用文献The LexA-RecA* structure reveals a cryptic lock-and-key mechanism for SOS activation.
Nat.Struct.Mol.Biol., 2024
8UH4
DownloadVisualize
BU of 8uh4 by Molmil
Cryo-EM structure of Maize Streak Virus (MSV) - single head Geminivirus
分子名称: Capsid protein, genomic DNA
著者Bennett, A.B, McKenna, R, Mietzsch, M, Hull, J.A.
登録日2023-10-06
公開日2023-11-22
実験手法ELECTRON MICROSCOPY (3.72 Å)
主引用文献The Two States of MSV Gemini Capsid Assembly
To Be Published
7Q52
DownloadVisualize
BU of 7q52 by Molmil
Crystal structure of S/T protein kinase PknG from Mycobacterium tuberculosis in complex with inhibitor L2W
分子名称: 2-azanyl-3-(4-fluorophenyl)carbonyl-indolizine-1-carboxamide, FE (III) ION, SODIUM ION, ...
著者Defelipe, L.A, Burastero, O, Bento, I, Garcia-Alai, M.M.
登録日2021-11-02
公開日2022-06-22
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (2.35 Å)
主引用文献Cosolvent Sites-Based Discovery of Mycobacterium Tuberculosis Protein Kinase G Inhibitors.
J.Med.Chem., 65, 2022
7QPA
DownloadVisualize
BU of 7qpa by Molmil
Outward-facing auxin bound form of auxin transporter PIN8
分子名称: 1,2-DILINOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 1H-INDOL-3-YLACETIC ACID, Auxin efflux carrier component 8
著者Ung, K.L, Winkler, M.B.L, Dedic, E, Stokes, D.L, Pedersen, B.P.
登録日2022-01-03
公開日2022-07-06
最終更新日2024-07-17
実験手法ELECTRON MICROSCOPY (3.18 Å)
主引用文献Structures and mechanism of the plant PIN-FORMED auxin transporter.
Nature, 609, 2022
7QP9
DownloadVisualize
BU of 7qp9 by Molmil
Outward-facing apo-form of auxin transporter PIN8
分子名称: 1,2-DILINOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE, Auxin efflux carrier component 8
著者Ung, K.L, Winkler, M.B.L, Dedic, E, Stokes, D.L, Pedersen, B.P.
登録日2022-01-03
公開日2022-07-06
最終更新日2024-07-17
実験手法ELECTRON MICROSCOPY (2.89 Å)
主引用文献Structures and mechanism of the plant PIN-FORMED auxin transporter.
Nature, 609, 2022
7QPC
DownloadVisualize
BU of 7qpc by Molmil
Inward-facing NPA bound form of auxin transporter PIN8
分子名称: 1,2-DILINOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 2-(naphthalen-1-ylcarbamoyl)benzoic acid, Auxin efflux carrier component 8
著者Ung, K.L, Winkler, M.B.L, Dedic, E, Stokes, D.L, Pedersen, B.P.
登録日2022-01-03
公開日2022-07-06
最終更新日2024-07-17
実験手法ELECTRON MICROSCOPY (3.44 Å)
主引用文献Structures and mechanism of the plant PIN-FORMED auxin transporter.
Nature, 609, 2022
6A4N
DownloadVisualize
BU of 6a4n by Molmil
HEWL crystals soaked in 2.5M GuHCl for 8 minutes
分子名称: CHLORIDE ION, GLYCEROL, GUANIDINE, ...
著者Tushar, R, Kini, R.M, Koh, C.Y, Hosur, M.V.
登録日2018-06-20
公開日2019-03-13
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献X-ray crystallographic analysis of time-dependent binding of guanidine hydrochloride to HEWL: First steps during protein unfolding.
Int. J. Biol. Macromol., 122, 2019
7QVP
DownloadVisualize
BU of 7qvp by Molmil
Human collided disome (di-ribosome) stalled on XBP1 mRNA
分子名称: 18S ribosomal RNA, 28S ribosomal RNA, 40S ribosomal protein S10, ...
著者Denk, T.G, Tesina, P, Beckmann, R.
登録日2022-01-22
公開日2022-10-12
最終更新日2024-07-17
実験手法ELECTRON MICROSCOPY (3 Å)
主引用文献A distinct mammalian disome collision interface harbors K63-linked polyubiquitination of uS10 to trigger hRQT-mediated subunit dissociation.
Nat Commun, 13, 2022
8UI7
DownloadVisualize
BU of 8ui7 by Molmil
Cryo-EM map of human clmap-clamp loader ATAD5-RFC-gapped PCNA complex in intermediate state 3
分子名称: ADENOSINE-5'-DIPHOSPHATE, ATPase family AAA domain-containing protein 5, MAGNESIUM ION, ...
著者Wang, F, He, Q, Li, H.
登録日2023-10-10
公開日2024-05-29
最終更新日2024-06-26
実験手法ELECTRON MICROSCOPY (4.2 Å)
主引用文献The human ATAD5 has evolved unique structural elements to function exclusively as a PCNA unloader.
Nat.Struct.Mol.Biol., 2024
8UI9
DownloadVisualize
BU of 8ui9 by Molmil
Cryo-EM map of human clamp-clamp loader ATAD5-RFC-cracked PCNA complex in intermediate state 2
分子名称: ADENOSINE-5'-DIPHOSPHATE, ATPase family AAA domain-containing protein 5, MAGNESIUM ION, ...
著者Wang, F, He, Q, Li, H.
登録日2023-10-10
公開日2024-05-29
最終更新日2024-06-26
実験手法ELECTRON MICROSCOPY (3.5 Å)
主引用文献The human ATAD5 has evolved unique structural elements to function exclusively as a PCNA unloader.
Nat.Struct.Mol.Biol., 2024
8UII
DownloadVisualize
BU of 8uii by Molmil
Cryo-EM map of human clamp-clamp loader ATAD5-RFC-closed PCNA complex in intermediate state 1
分子名称: ADENOSINE-5'-DIPHOSPHATE, ATPase family AAA domain-containing protein 5, MAGNESIUM ION, ...
著者Wang, F, He, Q, Li, H.
登録日2023-10-10
公開日2024-05-29
最終更新日2024-06-26
実験手法ELECTRON MICROSCOPY (3.04 Å)
主引用文献The human ATAD5 has evolved unique structural elements to function exclusively as a PCNA unloader.
Nat.Struct.Mol.Biol., 2024
4I9A
DownloadVisualize
BU of 4i9a by Molmil
Crystal Structure of Sus scrofa Quinolinate Phosphoribosyltransferase in Complex with Nicotinate Mononucleotide
分子名称: NICOTINATE MONONUCLEOTIDE, quinolinate phosphoribosyltransferase
著者Youn, H.-S, Kim, M.-K, Kang, K.B, Kim, T.G, Lee, J.-G, An, J.Y, Park, K.R, Lee, Y, Kang, J.Y, Song, H.E, Park, I, Cho, C, Fukuoka, S, Eom, S.H.
登録日2012-12-05
公開日2013-05-01
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.096 Å)
主引用文献Crystal structure of Sus scrofa quinolinate phosphoribosyltransferase in complex with nicotinate mononucleotide
Plos One, 8, 2013
4IW2
DownloadVisualize
BU of 4iw2 by Molmil
HSA-glucose complex
分子名称: D-glucose, PHOSPHATE ION, Serum albumin, ...
著者Wang, Y, Yu, H, Shi, X, Luo, Z, Huang, M.
登録日2013-01-23
公開日2013-04-24
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.41 Å)
主引用文献Structural mechanism of ring-opening reaction of glucose by human serum albumin
J.Biol.Chem., 288, 2013
6A4Q
DownloadVisualize
BU of 6a4q by Molmil
HEWL crystals soaked in 2.5M GuHCl for 110 minutes
分子名称: CHLORIDE ION, GLYCEROL, GUANIDINE, ...
著者Tushar, R, Kini, R.M, Koh, C.Y, Hosur, M.V.
登録日2018-06-20
公開日2019-03-13
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献X-ray crystallographic analysis of time-dependent binding of guanidine hydrochloride to HEWL: First steps during protein unfolding.
Int. J. Biol. Macromol., 122, 2019
1QR1
DownloadVisualize
BU of 1qr1 by Molmil
POOR BINDING OF A HER-2/NEU EPITOPE (GP2) TO HLA-A2.1 IS DUE TO A LACK OF INTERACTIONS IN THE CENTER OF THE PEPTIDE
分子名称: BETA-2 MICROGLOBULIN, GP2 PEPTIDE, HLA-A2.1 HEAVY CHAIN
著者Kuhns, J.J, Batalia, M.A, Yan, S, Collins, E.J.
登録日1999-06-17
公開日2000-01-01
最終更新日2021-11-03
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Poor binding of a HER-2/neu epitope (GP2) to HLA-A2.1 is due to a lack of interactions with the center of the peptide.
J.Biol.Chem., 274, 1999
6A4O
DownloadVisualize
BU of 6a4o by Molmil
HEWL crystals soaked in 2.5M GuHCl for 20 minutes
分子名称: CHLORIDE ION, GLYCEROL, GUANIDINE, ...
著者Tushar, R, Kini, R.M, Koh, C.Y, Hosur, M.V.
登録日2018-06-20
公開日2019-03-13
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献X-ray crystallographic analysis of time-dependent binding of guanidine hydrochloride to HEWL: First steps during protein unfolding.
Int. J. Biol. Macromol., 122, 2019
8TW8
DownloadVisualize
BU of 8tw8 by Molmil
Cryo-EM structure of S. cerevisiae Ctf18-RFC-PCNA complex in Apo state conformation I
分子名称: ADENOSINE-5'-DIPHOSPHATE, Chromosome transmission fidelity protein 18, MAGNESIUM ION, ...
著者Yuan, Z, Georgescu, R, O'Donnell, M, Li, H.
登録日2023-08-20
公開日2024-09-04
実験手法ELECTRON MICROSCOPY (3.5 Å)
主引用文献Cryo-EM reveals that Ctf18-RFC collaborates with PolE to load the PCNA clamp onto a leading strand DNA
To Be Published
8TW7
DownloadVisualize
BU of 8tw7 by Molmil
Cryo-EM structure of S. cerevisiae Ctf18-RFC-PCNA complex in Apo state conformation I
分子名称: ADENOSINE-5'-DIPHOSPHATE, Chromosome transmission fidelity protein 18, MAGNESIUM ION, ...
著者Yuan, Z, Georgescu, R, O'Donnell, M, Li, H.
登録日2023-08-20
公開日2024-09-04
実験手法ELECTRON MICROSCOPY (3.8 Å)
主引用文献Cryo-EM reveals that Ctf18-RFC collaborates with PolE to load the PCNA clamp onto a leading strand DNA
To Be Published
8TWB
DownloadVisualize
BU of 8twb by Molmil
Cryo-EM structure of S. cerevisiae Ctf18-RFC-PCNA-DNA complex
分子名称: ADENOSINE-5'-DIPHOSPHATE, Chromosome transmission fidelity protein 18, MAGNESIUM ION, ...
著者Yuan, Z, Georgescu, R, O'Donnell, M, Li, H.
登録日2023-08-20
公開日2024-09-04
実験手法ELECTRON MICROSCOPY (3.2 Å)
主引用文献Cryo-EM reveals that Ctf18-RFC collaborates with PolE to load the PCNA clamp onto a leading strand DNA
To Be Published
8TWA
DownloadVisualize
BU of 8twa by Molmil
Cryo-EM structure of S. cerevisiae Ctf18-RFC-PCNA-PolE-DNA complex
分子名称: ADENOSINE-5'-DIPHOSPHATE, Chromosome transmission fidelity protein 18, Chromosome transmission fidelity protein 8, ...
著者Yuan, Z, Georgescu, R, O'Donnell, M, Li, H.
登録日2023-08-20
公開日2024-09-04
実験手法ELECTRON MICROSCOPY (4.1 Å)
主引用文献Cryo-EM reveals that Ctf18-RFC collaborates with PolE to load the PCNA clamp onto a leading strand DNA
To Be Published
4IW1
DownloadVisualize
BU of 4iw1 by Molmil
HSA-fructose complex
分子名称: D-fructose, PHOSPHATE ION, Serum albumin, ...
著者Wang, Y, Yu, H, Shi, X, Huang, M.
登録日2013-01-23
公開日2013-04-24
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.56 Å)
主引用文献Structural mechanism of ring-opening reaction of glucose by human serum albumin
J.Biol.Chem., 288, 2013
6AL3
DownloadVisualize
BU of 6al3 by Molmil
Lys49 PLA2 BPII derived from the venom of Protobothrops flavoviridis.
分子名称: Basic phospholipase A2 BP-II, SULFATE ION
著者Matsui, T, Kamata, S, Suzuki, A, Oda-Ueda, N, Ogawa, T, Tanaka, Y.
登録日2018-09-05
公開日2019-01-16
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.57 Å)
主引用文献SDS-induced oligomerization of Lys49-phospholipase A2from snake venom.
Sci Rep, 9, 2019
7QUV
DownloadVisualize
BU of 7quv by Molmil
Crystal structure of human Calprotectin (S100A8/S100A9) in complex with Peptide 3
分子名称: 1,2-ETHANEDIOL, 4-methanoyl-2-(6-oxidanyl-3-oxidanylidene-4~{H}-xanthen-9-yl)benzoic acid, AMINO GROUP, ...
著者Diaz-Perlas, C, Heinis, C, Pojer, F, Lau, K.
登録日2022-01-19
公開日2023-02-01
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献High-affinity peptides developed against calprotectin and their application as synthetic ligands in diagnostic assays.
Nat Commun, 14, 2023

225399

件を2024-09-25に公開中

PDB statisticsPDBj update infoContact PDBjnumon