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5SY4
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BU of 5sy4 by Molmil
Atomic resolution structure of reduced E. coli YajL
分子名称: Chaperone YajL, MAGNESIUM ION
著者Wilson, M.A, Lin, J.
登録日2016-08-10
公開日2016-12-28
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (0.98 Å)
主引用文献Short Carboxylic Acid-Carboxylate Hydrogen Bonds Can Have Fully Localized Protons.
Biochemistry, 56, 2017
5RDA
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BU of 5rda by Molmil
PanDDA analysis group deposition -- Endothiapepsin ground state model 32
分子名称: Endothiapepsin
著者Weiss, M.S, Wollenhaupt, J, Metz, A, Barthel, T, Lima, G.M.A, Heine, A, Mueller, U, Klebe, G.
登録日2020-03-24
公開日2020-06-03
最終更新日2020-06-17
実験手法X-RAY DIFFRACTION (0.98 Å)
主引用文献F2X-Universal and F2X-Entry: Structurally Diverse Compound Libraries for Crystallographic Fragment Screening.
Structure, 28, 2020
3D1P
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BU of 3d1p by Molmil
Atomic resolution structure of uncharacterized protein from Saccharomyces cerevisiae
分子名称: ACETATE ION, CHLORIDE ION, Putative thiosulfate sulfurtransferase YOR285W
著者Nocek, B, Evdokimova, E, Kudritska, M, Savchenko, A, Edwards, A.M, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
登録日2008-05-06
公開日2008-07-08
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (0.98 Å)
主引用文献Atomic resolution structure of uncharacterized protein from Saccharomyces cerevisiae.
To be Published
5RC3
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BU of 5rc3 by Molmil
PanDDA analysis group deposition -- Endothiapepsin changed state model for fragment F2X-Entry Library F03a
分子名称: ACETATE ION, DIMETHYL SULFOXIDE, Endothiapepsin, ...
著者Weiss, M.S, Wollenhaupt, J, Metz, A, Barthel, T, Lima, G.M.A, Heine, A, Mueller, U, Klebe, G.
登録日2020-03-24
公開日2020-06-03
最終更新日2020-06-17
実験手法X-RAY DIFFRACTION (0.98 Å)
主引用文献F2X-Universal and F2X-Entry: Structurally Diverse Compound Libraries for Crystallographic Fragment Screening.
Structure, 28, 2020
1GO6
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BU of 1go6 by Molmil
Balhimycin in complex with Lys-D-ala-D-ala
分子名称: (2R,4S,6S)-4-azanyl-4,6-dimethyl-oxane-2,5,5-triol, (4R)-2-METHYLPENTANE-2,4-DIOL, (4S)-2-METHYL-2,4-PENTANEDIOL, ...
著者Lehmann, C, Bunkoczi, G, Vertesy, L, Sheldrick, G.M.
登録日2001-10-19
公開日2002-06-13
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (0.98 Å)
主引用文献Structures of Glycopeptide Antibiotics with Peptides that Model Bacterial Cell-Wall Precursors
J.Mol.Biol., 318, 2002
8RC7
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BU of 8rc7 by Molmil
The structure of membrane-active antibiotic cyclodecapeptide gramicidin S in complex with urea
分子名称: Gramicidin S, UREA
著者Dodson, E.J.
登録日2023-12-06
公開日2024-03-06
実験手法X-RAY DIFFRACTION (0.98 Å)
主引用文献The crystal structure of a hydrated gramicidin S urea complex
Nature, 275, 1978
4BCT
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BU of 4bct by Molmil
Crystal structure of kiwi-fruit allergen Act d 2
分子名称: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, THAUMATIN-LIKE PROTEIN
著者Pavkov-Keller, T, Bublin, M, Jankovic, M, Breiteneder, H, Keller, W.
登録日2012-10-03
公開日2013-10-16
実験手法X-RAY DIFFRACTION (0.98 Å)
主引用文献Crystal Structure of Kiwi-Fruit Allergen Act D 2
To be Published
1GHG
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BU of 1ghg by Molmil
CRYSTAL STRUCTURE OF VANCOMYCIN AGLYCON
分子名称: ACETIC ACID, DIMETHYL SULFOXIDE, VANCOMYCIN AGLYCON
著者Kaplan, J, Korty, B.D, Axelsen, P.H, Loll, P.J.
登録日2000-12-13
公開日2001-02-12
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (0.98 Å)
主引用文献The Role of Sugar Residues in Molecular Recognition by Vancomycin
J.Med.Chem., 44, 2001
5RDX
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BU of 5rdx by Molmil
PanDDA analysis group deposition -- Endothiapepsin ground state model 54
分子名称: Endothiapepsin
著者Weiss, M.S, Wollenhaupt, J, Metz, A, Barthel, T, Lima, G.M.A, Heine, A, Mueller, U, Klebe, G.
登録日2020-03-24
公開日2020-06-03
最終更新日2020-06-17
実験手法X-RAY DIFFRACTION (0.98 Å)
主引用文献F2X-Universal and F2X-Entry: Structurally Diverse Compound Libraries for Crystallographic Fragment Screening.
Structure, 28, 2020
1V0L
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BU of 1v0l by Molmil
Xylanase Xyn10A from Streptomyces lividans in complex with xylobio-isofagomine at pH 5.8
分子名称: ENDO-1,4-BETA-XYLANASE A, PIPERIDINE-3,4-DIOL, beta-D-xylopyranose
著者Gloster, T.M, Williams, S.J, Roberts, S, Tarling, C.A, Wicki, J, Withers, S.G, Davies, G.J.
登録日2004-03-31
公開日2004-08-16
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (0.98 Å)
主引用文献Atomic Resolution Analyses of the Binding of Xylobiose-Derived Deoxynojirimycin and Isofagomine to Xylanase Xyn10A
Chem.Commun.(Camb.), 16, 2004
5RVH
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BU of 5rvh by Molmil
PanDDA analysis group deposition -- Crystal structure of SARS-CoV-2 NSP3 macrodomain in complex with ZINC000000265642
分子名称: Non-structural protein 3, quinoline-3-carboxylic acid
著者Correy, G.J, Young, I.D, Thompson, M.C, Fraser, J.S.
登録日2020-09-28
公開日2020-12-16
最終更新日2024-05-22
実験手法X-RAY DIFFRACTION (0.98 Å)
主引用文献Fragment binding to the Nsp3 macrodomain of SARS-CoV-2 identified through crystallographic screening and computational docking.
Sci Adv, 7, 2021
4KXU
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BU of 4kxu by Molmil
Human transketolase in covalent complex with donor ketose D-fructose-6-phosphate
分子名称: 1,2-ETHANEDIOL, D-SORBITOL-6-PHOSPHATE, MAGNESIUM ION, ...
著者Neumann, P, Luedtke, S, Ficner, R, Tittmann, K.
登録日2013-05-28
公開日2013-08-21
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (0.98 Å)
主引用文献Sub-angstrom-resolution crystallography reveals physical distortions that enhance reactivity of a covalent enzymatic intermediate.
Nat Chem, 5, 2013
5XJZ
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BU of 5xjz by Molmil
Structure of DNA1-Ag complex
分子名称: DNA (5'-D(*GP*CP*AP*CP*GP*CP*GP*C)-3'), SILVER ION, SPERMINE
著者Liu, H.H, Gan, J.H.
登録日2017-05-04
公開日2017-12-06
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (0.98 Å)
主引用文献A DNA Structure Containing AgI -Mediated G:G and C:C Base Pairs
Angew. Chem. Int. Ed. Engl., 56, 2017
4FPT
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BU of 4fpt by Molmil
Carbonic Anhydrase II in complex with ethyl (2Z,4R)-2-(sulfamoylimino)-1,3-thiazolidine-4-carboxylate
分子名称: Carbonic anhydrase 2, DIMETHYL SULFOXIDE, GLYCEROL, ...
著者Di Pizio, A, Heine, A, Klebe, G.
登録日2012-06-22
公開日2013-07-03
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (0.98 Å)
主引用文献High resolution crystal structures of Carbonic Anhydrase II in complex with novel sulfamide binders
To be Published
2ZPM
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BU of 2zpm by Molmil
Crystal structure analysis of PDZ domain B
分子名称: Regulator of sigma E protease
著者Inaba, K, Suzuki, M.
登録日2008-07-17
公開日2008-10-21
最終更新日2017-10-11
実験手法X-RAY DIFFRACTION (0.98 Å)
主引用文献Crystal Structure analysis of PDZ-domain B
To be Published
4QBX
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BU of 4qbx by Molmil
Human Aldose Reductase complexed with a ligand with an IDD structure ({5-fluoro-2-[(3-nitrobenzyl)carbamoyl]phenoxy}acetic acid) at 0.98 A
分子名称: Aldose reductase, CITRIC ACID, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, ...
著者Rechlin, C, Heine, A, Klebe, G.
登録日2014-05-09
公開日2015-07-22
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (0.98 Å)
主引用文献Aldose Reductase: How expensive is the opening of the specificity pocket? IDD ligands under investigation
To be Published
1UNQ
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BU of 1unq by Molmil
High resolution crystal structure of the Pleckstrin Homology Domain Of Protein Kinase B/Akt Bound To Ins(1,3,4,5)-Tetrakisphophate
分子名称: INOSITOL-(1,3,4,5)-TETRAKISPHOSPHATE, RAC-ALPHA SERINE/THREONINE KINASE
著者Milburn, C.C, Deak, M, Kelly, S.M, Price, N.C, Alessi, D.R, van Aalten, D.M.F.
登録日2003-09-12
公開日2004-09-16
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (0.98 Å)
主引用文献Binding of phosphatidylinositol 3,4,5-trisphosphate to the pleckstrin homology domain of protein kinase B induces a conformational change.
Biochem. J., 375, 2003
7YZ7
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BU of 7yz7 by Molmil
Crystal structure of the zebrafish FoxH1 bound to the TGTGGATT site
分子名称: DNA (5'-D(*AP*GP*AP*TP*TP*GP*TP*GP*GP*AP*TP*TP*GP*AP*GP*A)-3'), DNA (5'-D(*TP*CP*TP*CP*AP*AP*TP*CP*CP*AP*CP*AP*AP*TP*CP*T)-3'), Forkhead box protein H1, ...
著者Pluta, R, Macias, M.J.
登録日2022-02-18
公開日2022-11-16
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (0.98 Å)
主引用文献Molecular basis for DNA recognition by the maternal pioneer transcription factor FoxH1.
Nat Commun, 13, 2022
2NLS
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BU of 2nls by Molmil
Human beta-defensin-1 (Mutant Gln24Ala)
分子名称: Beta-defensin 1
著者Lubkowski, J, Pazgier, M.
登録日2006-10-20
公開日2006-10-31
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (0.98 Å)
主引用文献Studies of the Biological Properties of Human beta-Defensin 1.
J.Biol.Chem., 282, 2007
4HGU
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BU of 4hgu by Molmil
Crystal Structure of Galleria mellonella Silk Protease Inhibitor 2
分子名称: SODIUM ION, Silk protease inhibitor 2
著者Krzywda, S, Jaskolski, M, Dvornyk, A, Kludkiewicz, B, Grzelak, K, Zagorski, W, Bal, W, Kopera, E.
登録日2012-10-08
公開日2013-10-09
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (0.98 Å)
主引用文献Atomic resolution structure of a protein prepared by non-enzymatic His-tag removal. Crystallographic and NMR study of GmSPI-2 inhibitor.
Plos One, 9, 2014
5XR0
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BU of 5xr0 by Molmil
Crystal structure of Notched-fin eelpout type III antifreeze protein A20T mutant (NFE6, AFP), P21 form
分子名称: Ice-structuring protein
著者Adachi, M, Shimizu, R, Shibazaki, C, Kondo, H, Tsuda, S.
登録日2017-06-07
公開日2018-05-16
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (0.98 Å)
主引用文献Polypentagonal ice-like water networks emerge solely in an activity-improved variant of ice-binding protein
Proc. Natl. Acad. Sci. U.S.A., 115, 2018
4F1U
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BU of 4f1u by Molmil
Subatomic resolution structure of a high affinity periplasmic phosphate-binding protein (PfluDING) bound with phosphate at pH 4.5
分子名称: 1,2-ETHANEDIOL, HYDROGENPHOSPHATE ION, Putative alkaline phosphatase, ...
著者Liebschner, D, Elias, M, Tawfik, D.S, Moniot, S, Fournier, B, Scott, K, Jelsch, C, Guillot, B, Lecomte, C, Chabriere, E.
登録日2012-05-07
公開日2012-05-23
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (0.98 Å)
主引用文献The molecular basis of phosphate discrimination in arsenate-rich environments.
Nature, 491, 2012
5ZGI
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BU of 5zgi by Molmil
Crystal structure of NDM-1 at pH6.5 (Succinate) with 1 molecule per asymmetric unit
分子名称: 1,2-ETHANEDIOL, HYDROXIDE ION, Metallo-beta-lactamase type 2, ...
著者Zhang, H, Hao, Q.
登録日2018-03-09
公開日2018-08-22
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (0.98 Å)
主引用文献Active-Site Conformational Fluctuations Promote the Enzymatic Activity of NDM-1.
Antimicrob. Agents Chemother., 62, 2018
1S5M
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BU of 1s5m by Molmil
Xylose Isomerase in Substrate and Inhibitor Michaelis States: Atomic Resolution Studies of a Metal-Mediated Hydride Shift
分子名称: MANGANESE (II) ION, SODIUM ION, Xylose isomerase, ...
著者Fenn, T.D, Ringe, D, Petsko, G.A.
登録日2004-01-21
公開日2004-02-10
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (0.98 Å)
主引用文献Xylose isomerase in substrate and inhibitor michaelis States: atomic resolution studies of a metal-mediated hydride shift(,).
Biochemistry, 43, 2004
5RD8
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BU of 5rd8 by Molmil
PanDDA analysis group deposition -- Endothiapepsin ground state model 30
分子名称: ACETATE ION, DI(HYDROXYETHYL)ETHER, Endothiapepsin, ...
著者Weiss, M.S, Wollenhaupt, J, Metz, A, Barthel, T, Lima, G.M.A, Heine, A, Mueller, U, Klebe, G.
登録日2020-03-24
公開日2020-06-03
最終更新日2020-06-17
実験手法X-RAY DIFFRACTION (0.98 Å)
主引用文献F2X-Universal and F2X-Entry: Structurally Diverse Compound Libraries for Crystallographic Fragment Screening.
Structure, 28, 2020

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