PDB: 71589 件ウェブページステータス検索Chemie searchBIRD

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437D	CRYSTAL STRUCTURE OF AN RNA PSEUDOKNOT FROM BEET WESTERN YELLOW VIRUS INVOLVED IN RIBOSOMAL FRAMESHIFTING 分子名称: MAGNESIUM ION, RNA PSEUDOKNOT, SODIUM ION 著者 Su, L, Chen, L, Egli, M, Berger, J.M, Rich, A. 登録日 1998-11-24 公開日 1998-12-03 最終更新日 2024-02-28 実験手法 X-RAY DIFFRACTION (1.6 Å) 主引用文献 Minor groove RNA triplex in the crystal structure of a ribosomal frameshifting viral pseudoknot. Nat.Struct.Biol., 6, 1999
6GRF	Crystal structure of the tandem DUF26 ectodomain from the Arabidopsis thaliana cysteine-rich receptor-like protein PDLP8. 分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Cysteine-rich repeat secretory protein 15 著者 Brandt, B, Hothorn, M. 登録日 2018-06-11 公開日 2018-12-19 最終更新日 2024-01-17 実験手法 X-RAY DIFFRACTION (1.95 Å) 主引用文献 Mechanistic insights into the evolution of DUF26-containing proteins in land plants. Commun Biol, 2, 2019
1UUF	crystal structure of a zinc-type alcohol dehydrogenase-like protein yahK 分子名称: ZINC ION, ZINC-TYPE ALCOHOL DEHYDROGENASE-LIKE PROTEIN YAHK 著者 Jeudy, S, Claverie, J.M, Abergel, C. 登録日 2003-12-18 公開日 2004-01-29 最終更新日 2024-05-08 実験手法 X-RAY DIFFRACTION (1.76 Å) 主引用文献 Crystal Structure of a Yahk, a Zinc-Type Alcohol Dehydrogenase-Like Protein To be Published
4A5Q	Crystal structure of the chitinase Chi1 fitted into the 3D structure of the Yersinia entomophaga toxin complex 分子名称: CHI1 著者 Busby, J.N, Landsberg, M.J, Simpson, R.M, Jones, S.A, Hankamer, B, Hurst, M.R.H, Lott, J.S. 登録日 2011-10-27 公開日 2011-11-16 最終更新日 2024-01-31 実験手法 ELECTRON MICROSCOPY (17 Å) 主引用文献 Structural Analysis of Chi1 Chitinase from Yen-Tc: The Multisubunit Insecticidal Abc Toxin Complex of Yersinia Entomophaga. J.Mol.Biol., 415, 2012
6ENI	Tryptophan Repressor TrpR from E.coli variant T44L S88Y with Indole-3-acetic acid as ligand 分子名称: 1,2-ETHANEDIOL, 1H-INDOL-3-YLACETIC ACID, Trp operon repressor 著者 Stiel, A.C, Shanmugaratnam, S, Herud-Sikimic, O, Juergens, G, Hocker, B. 登録日 2017-10-04 公開日 2019-02-06 最終更新日 2024-01-17 実験手法 X-RAY DIFFRACTION (1.1 Å) 主引用文献 A biosensor for the direct visualization of auxin Nature, 2021
4A03	Crystal Structure of Mycobacterium tuberculosis DXR in complex with the antibiotic FR900098 and cofactor NADPH 分子名称: 1-DEOXY-D-XYLULOSE 5-PHOSPHATE REDUCTOISOMERASE, 3-[ethanoyl(hydroxy)amino]propylphosphonic acid, GLYCEROL, ... 著者 Bjorkelid, C, Bergfors, T, Jones, T.A. 登録日 2011-09-07 公開日 2012-01-18 最終更新日 2023-12-20 実験手法 X-RAY DIFFRACTION (1.65 Å) 主引用文献 Structural Studies on Mycobacterium Tuberculosis Dxr in Complex with the Antibiotic Fr-900098. Acta Crystallogr.,Sect.D, 68, 2012
6ELG	Tryptophan Repressor TrpR from E.coli variant M42F T44L T81I S88Y with Indole-3-acetonitrile 分子名称: 1H-indol-3-ylacetonitrile, Trp operon repressor 著者 Stiel, A.C, Shanmugaratnam, S, Herud-Sikimic, O, Juergens, G, Hocker, B. 登録日 2017-09-28 公開日 2019-02-06 最終更新日 2024-01-17 実験手法 X-RAY DIFFRACTION (1.38 Å) 主引用文献 A biosensor for the direct visualization of auxin Nature, 2021
1UXA	ADENOVIRUS AD37 FIBRE HEAD in complex with sialyl-lactose 分子名称: ACETATE ION, FIBER PROTEIN, N-acetyl-alpha-neuraminic acid-(2-3)-beta-D-galactopyranose, ... 著者 Burmeister, W.P, Guilligay, D, Cusack, S, Wadell, G, Arnberg, N. 登録日 2004-02-24 公開日 2004-07-01 最終更新日 2023-12-13 実験手法 X-RAY DIFFRACTION (1.5 Å) 主引用文献 Crystal Structure of Species D Adenovirus Fiber Knobs and Their Sialic Acid Binding Sites J.Virol., 78, 2004
6E70	Structure of Wild Type Human Transthyretin in Complex with Diflunisal 分子名称: 5-(2,4-DIFLUOROPHENYL)-2-HYDROXY-BENZOIC ACID, CALCIUM ION, Transthyretin 著者 Chung, K, Saelices, L, Sawaya, M.R, Cascio, D, Eisenberg, D. 登録日 2018-07-25 公開日 2019-07-31 最終更新日 2024-03-13 実験手法 X-RAY DIFFRACTION (1.992 Å) 主引用文献 Structural Variants of Transthyretin To Be Published
6EQO	Tri-functional propionyl-CoA synthase of Erythrobacter sp. NAP1 with bound NADP+ and phosphomethylphosphonic acid adenylate ester 分子名称: Acetyl-coenzyme A synthetase, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, PHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER 著者 Zarzycki, J, Bernhardsgruetter, I, Voegeli, B, Wagner, T, Engilberge, S, Girard, E, Shima, S, Erb, T.J. 登録日 2017-10-13 公開日 2018-10-24 最終更新日 2024-05-08 実験手法 X-RAY DIFFRACTION (2.7 Å) 主引用文献 The multicatalytic compartment of propionyl-CoA synthase sequesters a toxic metabolite. Nat. Chem. Biol., 14, 2018
4AHL	P112L - Angiogenin mutants and amyotrophic lateral sclerosis - a biochemical and biological analysis 分子名称: ANGIOGENIN, L(+)-TARTARIC ACID 著者 Thiyagarajan, N, Ferguson, R, Saha, S, Pham, T, Subramanian, V, Acharya, K.R. 登録日 2012-02-06 公開日 2012-10-10 最終更新日 2023-12-20 実験手法 X-RAY DIFFRACTION (2.053 Å) 主引用文献 Structural and Molecular Insights Into the Mechanism of Action of Human Angiogenin-Als Variants in Neurons. Nat.Commun., 3, 2012
3Q2J	Crystal Structure of 3',5"-Aminoglycoside Phosphotransferase Type IIIa Protein Kinase Inhibitor CKI-7 Complex 分子名称: Aminoglycoside 3'-phosphotransferase, CALCIUM ION, N-(2-AMINOETHYL)-5-CHLOROISOQUINOLINE-8-SULFONAMIDE 著者 Fong, D.H, Xiong, B, Hwang, J, Berghuis, A.M. 登録日 2010-12-20 公開日 2011-05-18 最終更新日 2023-09-13 実験手法 X-RAY DIFFRACTION (2.1501 Å) 主引用文献 Crystal structures of two aminoglycoside kinases bound with a eukaryotic protein kinase inhibitor. Plos One, 6, 2011
4B4L	CRYSTAL STRUCTURE OF AN ARD DAP-KINASE 1 MUTANT 分子名称: DEATH-ASSOCIATED PROTEIN KINASE 1, PENTAETHYLENE GLYCOL, SULFATE ION 著者 Temmerman, K, Pogenberg, V, Jonko, W, Wilmanns, M. 登録日 2012-07-31 公開日 2013-08-21 最終更新日 2023-12-20 実験手法 X-RAY DIFFRACTION (1.75 Å) 主引用文献 A Pef/Y Substrate Recognition and Signature Motif Plays a Critical Role in Dapk-Related Kinase Activity. Chem.Biol., 21, 2014
6EHE	OmpTdeltaL8 (loop L8 deletion mutant of OmpT), an outer membrane protein of Vibrio cholerae 分子名称: (HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE, ACETATE ION, MAGNESIUM ION, ... 著者 van den berg, B, Pathania, M. 登録日 2017-09-13 公開日 2018-04-25 最終更新日 2024-01-17 実験手法 X-RAY DIFFRACTION (2.312 Å) 主引用文献 Unusual Constriction Zones in the Major Porins OmpU and OmpT from Vibrio cholerae. Structure, 26, 2018
6EIG	Crystal structure of N24Q/C128T mutant of Channelrhodopsin 2 分子名称: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, Archaeal-type opsin 2, EICOSANE, ... 著者 Kovalev, K, Borshchevskiy, V, Volkov, O, Polovinkin, V, Marin, E, Balandin, T, Astashkin, R, Bamann, C, Bueldt, G, Willlbold, D, Popov, A, Bamberg, E, Gordeliy, V. 登録日 2017-09-19 公開日 2017-12-06 最終更新日 2024-01-17 実験手法 X-RAY DIFFRACTION (2.7 Å) 主引用文献 Structural insights into ion conduction by channelrhodopsin 2. Science, 358, 2017
7MPZ	HNH Nuclease Domain from G. stearothermophilus Cas9 分子名称: CRISPR-associated endonuclease Cas9 著者 D'Ordine, A.M, Belato, H.B, Lisi, G.P, Jogl, G. 登録日 2021-05-05 公開日 2021-12-22 最終更新日 2023-10-18 実験手法 X-RAY DIFFRACTION (2.04 Å) 主引用文献 Structural and dynamic insights into the HNH nuclease of divergent Cas9 species. J.Struct.Biol., 214, 2021
4B3M	Crystal structure of the 30S ribosome in complex with compound 1 分子名称: (1R,2R,3S,4R,6S)-4,6-diamino-2-{[3-O-(2,6-diamino-2,6-dideoxy-beta-L-idopyranosyl)-beta-D-ribofuranosyl]oxy}-3-hydroxycyclohexyl 2-amino-4,6-O-benzylidene-2-deoxy-alpha-D-glucopyranoside, 16S RIBOSOMAL RNA, 30S RIBOSOMAL PROTEIN S10, ... 著者 Ng, C.L, Lang, K, Shcherbakov, D, Matt, T, Perez-Fernandez, D, Patak, R, Meyer, M, Duscha, S, Akbergenov, R, Boukari, H, Freihofer, P, Kudyba, I, Reddy, M.S.K, Nandurikar, R.S, Ramakrishnan, V, Vasella, A, Bottger, E.C. 登録日 2012-07-25 公開日 2013-08-07 最終更新日 2023-12-20 実験手法 X-RAY DIFFRACTION (2.9 Å) 主引用文献 4'-O-Substitutions Determine Selectivity of Aminoglycoside Antibiotics Nat.Commun., 5, 2014
3MWO	Human carbonic anhydrase II in a doubled monoclinic cell: a re-determination 分子名称: Carbonic anhydrase 2, ZINC ION 著者 Robbins, A.H, McKenna, R. 登録日 2010-05-06 公開日 2010-06-09 最終更新日 2023-09-06 実験手法 X-RAY DIFFRACTION (1.4 Å) 主引用文献 Emerging from pseudo-symmetry: the redetermination of human carbonic anhydrase II in monoclinic P2(1) with a doubled a axis. Acta Crystallogr.,Sect.D, 66, 2010
7M4M	Crystal structure of RBR E3 ligase RNF216 with ubiquitin 分子名称: E3 ubiquitin-protein ligase RNF216, GLYCEROL, Ubiquitin, ... 著者 Cotton, T.R, Lechtenberg, B.C. 登録日 2021-03-21 公開日 2022-01-05 最終更新日 2024-04-03 実験手法 X-RAY DIFFRACTION (2.39 Å) 主引用文献 Structural basis of K63-ubiquitin chain formation by the Gordon-Holmes syndrome RBR E3 ubiquitin ligase RNF216. Mol.Cell, 82, 2022
7M4N	Crystal structure of RBR E3 ligase RNF216 in complex with K63-linked di-ubiquitin 分子名称: E3 ubiquitin-protein ligase RNF216, GLYCEROL, SULFATE ION, ... 著者 Cotton, T.R, Lechtenberg, B.C. 登録日 2021-03-21 公開日 2022-01-05 最終更新日 2024-04-03 実験手法 X-RAY DIFFRACTION (2.52 Å) 主引用文献 Structural basis of K63-ubiquitin chain formation by the Gordon-Holmes syndrome RBR E3 ubiquitin ligase RNF216. Mol.Cell, 82, 2022
3N3E	Zebrafish AlphaA crystallin 分子名称: Alpha A crystallin 著者 Laganowsky, A, Eisenberg, D. 登録日 2010-05-19 公開日 2010-08-11 最終更新日 2023-09-06 実験手法 X-RAY DIFFRACTION (1.75 Å) 主引用文献 Non-3D domain swapped crystal structure of truncated zebrafish alphaA crystallin. Protein Sci., 19, 2010
4B3R	Crystal structure of the 30S ribosome in complex with compound 30 分子名称: (1R,2R,3S,4R,6S)-4,6-diamino-2-{[3-O-(2,6-diamino-2,6-dideoxy-beta-L-idopyranosyl)-beta-D-ribofuranosyl]oxy}-3-hydroxycyclohexyl 2-amino-2-deoxy-4,6-O-[(1R)-3-phenylpropylidene]-alpha-D-glucopyranoside, 16S RIBOSOMAL RNA, 30S RIBOSOMAL PROTEIN S10, ... 著者 Ng, C.L, Lang, K, Shcherbakov, D, Matt, T, Perez-Fernandez, D, Patak, R, Meyer, M, Duscha, S, Akbergenov, R, Boukari, H, Freihofer, P, Kudyba, I, Reddy, M.S.K, Nandurikar, R.S, Ramakrishnan, V, Vasella, A, Bottger, E.C. 登録日 2012-07-26 公開日 2013-08-07 最終更新日 2023-12-20 実験手法 X-RAY DIFFRACTION (3 Å) 主引用文献 4'-O-Substitutions Determine Selectivity of Aminoglycoside Antibiotics Nat.Commun., 5, 2014
1T98	Crystal Structure of MukF(1-287) 分子名称: Chromosome partition protein mukF 著者 Fennell-Fezzie, R, Berger, J.M. 登録日 2004-05-14 公開日 2005-05-24 最終更新日 2017-10-11 実験手法 X-RAY DIFFRACTION (2.9 Å) 主引用文献 The MukF subunit of Escherichia coli condensin: architecture and functional relationship to kleisins. Embo J., 24, 2005
6GSC	Sphingobacterium sp. T2 manganese superoxide dismutase catalyses the oxidative demethylation of polymeric lignin via generation of hydroxyl radical 分子名称: MANGANESE (II) ION, Superoxide dismutase 著者 Rashid, G.M.M, Zhang, X, Wilkinson, R.C, Fulop, V, Cottyn, B, Baumberger, S, Bugg, T.D.H. 登録日 2018-06-13 公開日 2018-10-03 最終更新日 2024-01-17 実験手法 X-RAY DIFFRACTION (1.32 Å) 主引用文献 Sphingobacterium sp. T2 Manganese Superoxide Dismutase Catalyzes the Oxidative Demethylation of Polymeric Lignin via Generation of Hydroxyl Radical. ACS Chem. Biol., 13, 2018
1TKH	Streptomyces griseus aminopeptidase complexed with D-Phenylalanine 分子名称: Aminopeptidase, CALCIUM ION, D-PHENYLALANINE, ... 著者 Reiland, V, Gilboa, R, Spungin-Bialik, A, Schomburg, D, Shoham, Y, Blumberg, S, Shoham, G. 登録日 2004-06-08 公開日 2005-06-14 最終更新日 2011-07-13 実験手法 X-RAY DIFFRACTION (1.25 Å) 主引用文献 Interactions of D Amino Acids with Streptomyces griseus Aminopeptidase To be Published

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