PDB: 230764 件ウェブページステータス検索Chemie searchBIRD

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4CA9	Structure of the Nucleoplasmin-like N-terminal domain of Drosophila FKBP39 分子名称: 39 KDA FK506-BINDING NUCLEAR PROTEIN 著者 Artero, J, Forsyth, T, Callow, P, Watson, A.A, Zhang, W, Laue, E.D, Edlich-Muth, C, Przewloka, M. 登録日 2013-10-07 公開日 2014-10-29 最終更新日 2024-06-19 実験手法 SOLUTION NMR 主引用文献 The Pentameric Nucleoplasmin Fold is Present in Drosophila Fkbp39 and a Large Number of Chromatin-Related Proteins. J.Mol.Biol., 427, 2015
8IF5	AFB1-AF26 APTAMER COMPLEX 分子名称: AFB1 DNA aptamer (26-MER), AFLATOXIN B1 著者 Xu, G.H, Wang, C, Li, C.G. 登録日 2023-02-17 公開日 2023-07-19 最終更新日 2024-05-15 実験手法 SOLUTION NMR 主引用文献 Structural basis for high-affinity recognition of aflatoxin B1 by a DNA aptamer. Nucleic Acids Res., 51, 2023
3F2E	Crystal structure of Yellowstone SIRV coat protein C-terminus 分子名称: CITRIC ACID, SIRV coat protein 著者 Taurog, R.E, Szymczyna, B.R, Williamson, J.R, Johnson, J.E. 登録日 2008-10-29 公開日 2009-04-21 最終更新日 2024-04-03 実験手法 X-RAY DIFFRACTION (1.668 Å) 主引用文献 Synergy of NMR, computation, and X-ray crystallography for structural biology. Structure, 17, 2009
5HAW	structures of the NO factor SlmA bound to DNA and the cytoskeletal cell division protein FtsZ 分子名称: DNA (5'-D(*GP*TP*GP*AP*GP*TP*AP*CP*TP*CP*AP*C)-3'), FtsZ CTT, Nucleoid occlusion factor SlmA 著者 Schumacher, M.A, Zeng, W. 登録日 2015-12-31 公開日 2016-04-13 最終更新日 2024-05-22 実験手法 X-RAY DIFFRACTION (1.89 Å) 主引用文献 Structures of the nucleoid occlusion protein SlmA bound to DNA and the C-terminal domain of the cytoskeletal protein FtsZ. Proc.Natl.Acad.Sci.USA, 113, 2016
5HBY	RNA primer-template complex with 2-methylimidazole-activated monomer analogue-3 binding sites 分子名称: MAGNESIUM ION, RNA (5'-R(*(LCC)P*(LCC)P*(LCC)P*(LCG)P*AP*CP*UP*UP*AP*AP*GP*UP*C)-3'), [(2~{R},3~{S},4~{R},5~{R})-5-(2-azanyl-6-oxidanylidene-1~{H}-purin-9-yl)-3,4-bis(oxidanyl)oxolan-2-yl]methoxy-(3-methyl-1~{H}-pyrazol-4-yl)phosphinic acid 著者 Zhang, W, Tam, C.P, Wang, J, Szostak, J.W. 登録日 2016-01-03 公開日 2016-12-07 最終更新日 2024-03-06 実験手法 X-RAY DIFFRACTION (1.18 Å) 主引用文献 Unusual Base-Pairing Interactions in Monomer-Template Complexes. ACS Cent Sci, 2, 2016
6A28	Crystal structure of PprA W183R mutant form 2 分子名称: DNA repair protein PprA, SULFATE ION 著者 Adachi, M, Shibazaki, C, Shimizu, R, Arai, S, Satoh, K, Narumi, I, Kuroki, R. 登録日 2018-06-09 公開日 2018-12-26 最終更新日 2024-10-30 実験手法 X-RAY DIFFRACTION (2.193 Å) 主引用文献 Extended structure of pleiotropic DNA repair-promoting protein PprA from Deinococcus radiodurans. FASEB J., 33, 2019
6EC0	Crystal structure of the wild-type heterocomplex between coil 1B domains of human intermediate filament proteins keratin 1 (KRT1) and keratin 10 (KRT10) 分子名称: CADMIUM ION, COBALT (II) ION, Keratin 1, ... 著者 Eldirany, S.A, Lomakin, I.B, Bunick, C.G. 登録日 2018-08-07 公開日 2019-05-15 最終更新日 2024-04-03 実験手法 X-RAY DIFFRACTION (2.983 Å) 主引用文献 Human keratin 1/10-1B tetramer structures reveal a knob-pocket mechanism in intermediate filament assembly. Embo J., 38, 2019
4OI0	bound to ssRNA dinucleotide GC, ADP, AlF4-, and Mg2+(transition state, data set I) 分子名称: ADENOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, NONAETHYLENE GLYCOL, ... 著者 Dikfidan, A, Loll, B, Zeymer, C, Clausen, T, Meinhart, A. 登録日 2014-01-18 公開日 2014-05-14 最終更新日 2024-02-28 実験手法 X-RAY DIFFRACTION (2.2 Å) 主引用文献 RNA specificity and regulation of catalysis in the eukaryotic polynucleotide kinase clp1. Mol.Cell, 54, 2014
8QJG	Crystal structure of cytochrome domain 2 from PgcA 分子名称: 1,2-ETHANEDIOL, HEME C, Lipoprotein cytochrome c, ... 著者 Nash, B.W, Edwards, M.J, Clarke, T.A. 登録日 2023-09-13 公開日 2024-11-06 実験手法 X-RAY DIFFRACTION (1.8 Å) 主引用文献 Tethered heme domains in a triheme cytochrome allow for increased electron transport distances. Protein Sci., 33, 2024
8EKY	Cryo-EM structure of the human PRDX4-ErP46 complex 分子名称: Peroxiredoxin-4, Thioredoxin domain-containing protein 5 著者 Su, C.C. 登録日 2022-09-22 公開日 2023-05-03 最終更新日 2024-11-06 実験手法 ELECTRON MICROSCOPY (3.47 Å) 主引用文献 High-resolution structural-omics of human liver enzymes. Cell Rep, 42, 2023
6NKX	Ternary complex crystal structure of K289M variant of DNA polymerase Beta with "hot-spot sequence" with dGTP 分子名称: 2'-DEOXYGUANOSINE-5'-TRIPHOSPHATE, CHLORIDE ION, DNA (5'-D(*CP*CP*GP*AP*AP*CP*AP*AP*GP*CP*AP*TP*CP*AP*GP*C)-3'), ... 著者 Batra, V.K, Wilson, S.H. 登録日 2019-01-07 公開日 2020-01-08 最終更新日 2024-03-13 実験手法 X-RAY DIFFRACTION (1.98 Å) 主引用文献 Revealing an Internal Stabilization Deficiency in the DNA Polymerase beta K289M Cancer Variant through the Combined Use of Chemical Biology and X-ray Crystallography. Biochemistry, 59, 2020
1NZ5	The Horse heart myoglobin variant K45E/K63E complexed with Manganese 分子名称: MANGANESE (II) ION, Myoglobin, PROTOPORPHYRIN IX CONTAINING FE 著者 Hunter, C.L, Maurus, R, Mauk, M.R, Lee, H, Raven, E.L, Tong, H, Nguyen, N, Smith, S, Brayer, G.D, Mauk, A.G. 登録日 2003-02-15 公開日 2003-04-08 最終更新日 2024-02-14 実験手法 X-RAY DIFFRACTION (1.7 Å) 主引用文献 Introduction and characterization of a functionally linked metal ion binding site at the exposed heme edge of myoglobin Proc.Natl.Acad.Sci.USA, 100, 2003
5MGX	The structure of FKBP38 in complex with the MEEVD tetratricopeptide binding-motif of Hsp90 分子名称: Peptidyl-prolyl cis-trans isomerase FKBP8, yeast HSP90 C-terminus 著者 Roe, S.M, Blundell, K.L, Prodromou, C. 登録日 2016-11-22 公開日 2017-03-22 最終更新日 2024-01-17 実験手法 X-RAY DIFFRACTION (2.18 Å) 主引用文献 The structure of FKBP38 in complex with the MEEVD tetratricopeptide binding-motif of Hsp90. PLoS ONE, 12, 2017
8EKW	Cryo-EM structure of human PRDX4 分子名称: Peroxiredoxin-4 著者 Su, C.C. 登録日 2022-09-22 公開日 2023-05-03 最終更新日 2023-11-15 実験手法 ELECTRON MICROSCOPY (2.83 Å) 主引用文献 High-resolution structural-omics of human liver enzymes. Cell Rep, 42, 2023
4GKL	Crystal structure of a noncanonic maltogenic alpha-amylase AmyB from Thermotoga neapolitana 分子名称: Alpha-amylase 著者 Ha, N.C, Jun, S.Y, Kim, J.S. 登録日 2012-08-13 公開日 2013-02-27 最終更新日 2024-03-20 実験手法 X-RAY DIFFRACTION (2.4 Å) 主引用文献 Structure of a novel alpha-amylase AmyB from Thermotoga neapolitana that produces maltose from the nonreducing end of polysaccharides Acta Crystallogr.,Sect.D, 69, 2013
6B2X	Apo YiuA Crystal Form 1 分子名称: CHLORIDE ION, SODIUM ION, Solute-binding periplasmic protein of iron/siderophore ABC transporter 著者 Radka, C.D, DeLucas, L.J, Aller, S.G. 登録日 2017-09-20 公開日 2017-11-15 最終更新日 2024-10-09 実験手法 X-RAY DIFFRACTION (2.199 Å) 主引用文献 The crystal structure of the Yersinia pestis iron chaperone YiuA reveals a basic triad binding motif for the chelated metal. Acta Crystallogr D Struct Biol, 73, 2017
7T5H	Structure of rabies virus phosphoprotein C-terminal domain, wild type 分子名称: 1,2-ETHANEDIOL, PHOSPHATE ION, Phosphoprotein, ... 著者 Zhan, J, Metcalfe, R.D, Gooley, P.R, Griffin, M.D.W. 登録日 2021-12-12 公開日 2022-04-20 最終更新日 2023-10-18 実験手法 X-RAY DIFFRACTION (1.5 Å) 主引用文献 Molecular Basis of Functional Effects of Phosphorylation of the C-Terminal Domain of the Rabies Virus P Protein. J.Virol., 96, 2022
6NKR	Ternary complex crystal structure of K289M variant of DNA polymerase Beta with dGTP 分子名称: 2'-DEOXYGUANOSINE-5'-TRIPHOSPHATE, CHLORIDE ION, DNA (5'-D(*CP*CP*GP*AP*CP*CP*GP*CP*GP*CP*AP*TP*CP*AP*GP*C)-3'), ... 著者 Batra, V.K, Wilson, S.H. 登録日 2019-01-07 公開日 2020-01-08 最終更新日 2023-10-11 実験手法 X-RAY DIFFRACTION (2.45 Å) 主引用文献 Revealing an Internal Stabilization Deficiency in the DNA Polymerase beta K289M Cancer Variant through the Combined Use of Chemical Biology and X-ray Crystallography. Biochemistry, 59, 2020
6NKU	Ternary complex crystal structure of DNA polymerase Beta with "hot-spot sequence" with dGTP 分子名称: 2'-DEOXYGUANOSINE-5'-TRIPHOSPHATE, CHLORIDE ION, DNA (5'-D(*CP*CP*GP*AP*AP*CP*AP*AP*GP*CP*AP*TP*CP*AP*GP*C)-3'), ... 著者 Batra, V.K, Wilson, S.H. 登録日 2019-01-07 公開日 2020-01-08 最終更新日 2023-10-11 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 Revealing an Internal Stabilization Deficiency in the DNA Polymerase beta K289M Cancer Variant through the Combined Use of Chemical Biology and X-ray Crystallography. Biochemistry, 59, 2020
6BVV	Nipah virus W protein C-terminus in complex with Importin alpha 3 分子名称: Importin subunit alpha-3, Protein W 著者 Smith, K.M, Tsimbalyuk, S, Edwards, M.R, Aragao, D, Cross, E.M, Basler, C.F, Forwood, J.K. 登録日 2017-12-13 公開日 2018-07-04 最終更新日 2024-05-22 実験手法 X-RAY DIFFRACTION (2.3 Å) 主引用文献 Structural basis for importin alpha 3 specificity of W proteins in Hendra and Nipah viruses. Nat Commun, 9, 2018
4YRW	rat xanthine oxidoreductase, C-terminal deletion protein variant 分子名称: BICARBONATE ION, CALCIUM ION, FE2/S2 (INORGANIC) CLUSTER, ... 著者 Okamoto, K. 登録日 2015-03-16 公開日 2015-04-29 最終更新日 2023-11-08 実験手法 X-RAY DIFFRACTION (1.99 Å) 主引用文献 The C-terminal peptide plays a role in the formation of an intermediate form during the transition between xanthine dehydrogenase and xanthine oxidase Febs J., 282, 2015
1OAG	Ascorbate peroxidase from soybean cytosol 分子名称: ASCORBATE PEROXIDASE, PROTOPORPHYRIN IX CONTAINING FE, SULFATE ION 著者 Sharp, K.H, Raven, E.L, Moody, P.C.E. 登録日 2003-01-13 公開日 2003-03-20 最終更新日 2023-12-13 実験手法 X-RAY DIFFRACTION (1.75 Å) 主引用文献 Crystal Structure of the Ascorbate Peroxidase-Ascorbate Complex Nat.Struct.Biol., 10, 2003
1BI4	CATALYTIC DOMAIN OF HIV-1 INTEGRASE 分子名称: INTEGRASE 著者 Maignan, S, Guilloteau, J.P, Zhou-Liu, Q, Clement-Mella, C, Mikol, V. 登録日 1998-06-22 公開日 1998-11-04 最終更新日 2024-05-22 実験手法 X-RAY DIFFRACTION (2.5 Å) 主引用文献 Crystal structures of the catalytic domain of HIV-1 integrase free and complexed with its metal cofactor: high level of similarity of the active site with other viral integrases. J.Mol.Biol., 282, 1998
5IVL	CshA Helicase 分子名称: DEAD-box ATP-dependent RNA helicase CshA, SULFATE ION 著者 Huen, J, Lin, C.-L, Yi, W.-L, Li, C.-L, Yuan, H. 登録日 2016-03-21 公開日 2017-03-22 最終更新日 2023-11-08 実験手法 X-RAY DIFFRACTION (2.3 Å) 主引用文献 Structural Insights into a Unique Dimeric DEAD-Box Helicase CshA that Promotes RNA Decay. Structure, 25, 2017
5IW3	anti-CD20 monoclonal antibody Fc fragment 分子名称: ACETATE ION, Ig gamma-1 chain C region, SULFATE ION, ... 著者 Tang, C, Chen, Z. 登録日 2016-03-21 公開日 2017-03-29 最終更新日 2024-10-16 実験手法 X-RAY DIFFRACTION (2.05 Å) 主引用文献 Structure of anti-CD20 monoclonal antibody Fc fragment at 2.05 Angstroms resolution To Be Published

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