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2YWB
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Crystal structure of GMP synthetase from Thermus thermophilus
分子名称: GMP synthase [glutamine-hydrolyzing]
著者Baba, S, Kanagawa, M, Yanai, H, Ishii, T, Kuramitsu, S, Yokoyama, S, Sampei, G, Kawai, G, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2007-04-20
公開日2007-10-23
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Crystal structure of GMP synthetase from Thermus thermophilus
To be Published
2YXQ
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BU of 2yxq by Molmil
The plug domain of the SecY protein stablizes the closed state of the translocation channel and maintains a membrane seal
分子名称: Preprotein translocase secG subunit, Preprotein translocase subunit secE, Preprotein translocase subunit secY
著者Li, W, Schulman, S.
登録日2007-04-27
公開日2007-08-14
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (3.5 Å)
主引用文献The plug domain of the SecY protein stabilizes the closed state of the translocation channel and maintains a membrane seal
Mol.Cell, 26, 2007
6X37
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BU of 6x37 by Molmil
Crystal structure of PT3245 bound to HIF2a-B*:ARNT-B* complex
分子名称: 3-fluoro-5-{[(7R)-7-hydroxy-1-(trifluoromethyl)-6,7-dihydro-5H-cyclopenta[c]pyridin-4-yl]oxy}benzonitrile, Aryl hydrocarbon receptor nuclear translocator, Endothelial PAS domain-containing protein 1
著者Du, X.
登録日2020-05-21
公開日2021-05-26
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.94 Å)
主引用文献Crystal structure of PT3245 bound to HIF2a-B*:ARNT-B* complex
To Be Published
2YWW
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Crystal structure of aspartate carbamoyltransferase regulatory chain from Methanocaldococcus jannaschii
分子名称: ADENOSINE-5'-TRIPHOSPHATE, Aspartate carbamoyltransferase regulatory chain, ZINC ION
著者Kanagawa, M, Baba, S, Kuramitsu, S, Yokoyama, S, Kawai, G, Sampei, G, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2007-04-23
公開日2007-10-23
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Crystal structure of aspartate carbamoyltransferase regulatory chain from Methanocaldococcus jannaschii
To be Published
2YXO
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BU of 2yxo by Molmil
Histidinol Phosphate Phosphatase complexed with Sulfate
分子名称: FE (III) ION, GLYCEROL, Histidinol phosphatase, ...
著者Omi, R.
登録日2007-04-26
公開日2007-11-27
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Crystal Structure of Monofunctional Histidinol Phosphate Phosphatase from Thermus thermophilus HB8.
Biochemistry, 46, 2007
6DQU
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BU of 6dqu by Molmil
Crystal structure of Haemophilus influenzae OppA complex with GIINTL
分子名称: GLY-ILE-ILE-ASN-THR-LEU, Periplasmic oligopeptide-binding protein, SULFATE ION
著者Tanaka, K.J, Pinkett, H.W.
登録日2018-06-11
公開日2018-11-28
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献Oligopeptide-binding protein from nontypeableHaemophilus influenzaehas ligand-specific sites to accommodate peptides and heme in the binding pocket.
J. Biol. Chem., 294, 2019
6X2H
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BU of 6x2h by Molmil
Crystal structure of PT2863 bound to HIF2a-B*:ARNT-B* complex
分子名称: Aryl hydrocarbon receptor nuclear translocator, Endothelial PAS domain-containing protein 1, cis-3-({(1S)-7-[dihydroxy(trifluoromethyl)-lambda~4~-sulfanyl]-2,2-difluoro-1-hydroxy-2,3-dihydro-1H-inden-4-yl}oxy)cyclobutane-1-carbonitrile
著者Du, X.
登録日2020-05-20
公開日2021-05-26
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Crystal structure of PT2863 bound to HIF2a-B*:ARNT-B* complex
To Be Published
2YY6
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Crystal Structure of the phosphoglycolate phosphatase from Aquifex aeolicus VF5
分子名称: SULFATE ION, phosphoglycolate phosphatase
著者Tanaka, T, Kumarevel, T.S, Kuramitsu, S, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2007-04-27
公開日2007-10-30
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Crystal Structure of the phosphoglycolate phosphatase from Aquifex aeolicus VF5
To be Published
6X3D
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Crystal structure of PT3388 bound to HIF2a-B*:ARNT-B* complex
分子名称: (6R,7S)-4-[(3,3-difluorocyclobutyl)oxy]-6-fluoro-1-(trifluoromethyl)-6,7-dihydro-5H-cyclopenta[c]pyridin-7-ol, Aryl hydrocarbon receptor nuclear translocator, Endothelial PAS domain-containing protein 1
著者Du, X.
登録日2020-05-21
公開日2021-05-26
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Crystal structure of PT3388 bound to HIF2a-B*:ARNT-B* complex
To Be Published
2YY7
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Crystal structure of thermolabile L-threonine dehydrogenase from Flavobacterium frigidimaris KUC-1
分子名称: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, 3,6,9,12,15,18,21-HEPTAOXATRICOSANE-1,23-DIOL, GLYCEROL, ...
著者Yoneda, K, Sakuraba, H, Oikawa, T, Muraoka, I, Ohshima, T.
登録日2007-04-27
公開日2008-04-29
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.061 Å)
主引用文献Crystal structure of UDP-galactose 4-epimerase-like L-threonine dehydrogenase belonging to the intermediate short-chain dehydrogenase-reductase superfamily
Febs J., 277, 2010
6DBG
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BU of 6dbg by Molmil
Crystal Structure of VHH R303 in complex with InlB-LRR-IR
分子名称: Internalin B, VHH R303
著者Brooks, C.L, Toride King, M, Huh, I.
登録日2018-05-03
公開日2018-07-18
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (1.51 Å)
主引用文献Structural basis of VHH-mediated neutralization of the food-borne pathogenListeria monocytogenes.
J. Biol. Chem., 293, 2018
6X3B
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Structure of RMD from Pseudomonas aeruginosa complexed with NADPH
分子名称: GDP-6-deoxy-D-mannose reductase, NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, NITRATE ION, ...
著者Cook, P.D, Nicholson, B.E, McHugh, C.S.
登録日2020-05-21
公開日2021-05-26
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.91 Å)
主引用文献X-ray crystallographic structure of RMD, the reductase involved in GDP-d-rhamnose production
To Be Published
2YYK
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Crystal structure of the mutant of HpaB (T198I, A276G, and R466H)
分子名称: 4-hydroxyphenylacetate-3-hydroxylase, ACETIC ACID, GLYCEROL, ...
著者Kim, S.-H, Hisano, T, Takeda, K, Iwasaki, W, Ebihara, A, Miki, K.
登録日2007-04-30
公開日2007-09-04
最終更新日2024-05-29
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Crystal Structure of the Oxygenase Component (HpaB) of the 4-Hydroxyphenylacetate 3-Monooxygenase from Thermus thermophilus HB8
J.Biol.Chem., 282, 2007
2YYT
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Crystal structure of uncharacterized conserved protein from Geobacillus kaustophilus
分子名称: Orotidine 5'-phosphate decarboxylase
著者Kanagawa, M, Baba, S, Nakamura, Y, Bessho, Y, Kuramitsu, S, Yokoyama, S, Kawai, G, Sampei, G, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2007-05-02
公開日2007-11-06
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Crystal structure of uncharacterized conserved protein from Geobacillus kaustophilus
To be Published
6X21
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Crystal structure of PT1673 bound to HIF2a-B*:ARNT-B* complex
分子名称: 1-(3-bromo-5-fluorophenoxy)-4-[(difluoromethyl)sulfonyl]-2-nitrobenzene, Aryl hydrocarbon receptor nuclear translocator, Endothelial PAS domain-containing protein 1
著者Du, X.
登録日2020-05-19
公開日2021-05-26
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.54 Å)
主引用文献Crystal structure of PT1673 bound to HIF2a-B*:ARNT-B* complex
To Be Published
6WPX
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BU of 6wpx by Molmil
Crystal structure of Bacillus licheniformis lipase BlEst2 in propetide form
分子名称: BlEst2, IODIDE ION
著者Nakamura, A.M, Godoy, A.S, Kadowaki, M.A.S, Polikarpov, I.
登録日2020-04-28
公開日2021-06-09
最終更新日2024-08-07
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structures of BlEst2 from Bacillus licheniformis in its propeptide and mature forms reveal autoinhibitory effects of the C-terminal domain
Febs J., n/a, 2024
6WPY
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BU of 6wpy by Molmil
Crystal structure of Bacillus licheniformis lipase BlEst2 in mature form
分子名称: BlEst2
著者Nakamura, A.M, Godoy, A.S, Kadowaki, M.A.S, Polikarpov, I.
登録日2020-04-28
公開日2021-06-09
最終更新日2024-08-07
実験手法X-RAY DIFFRACTION (3.6 Å)
主引用文献Structures of BlEst2 from Bacillus licheniformis in its propeptide and mature forms reveal autoinhibitory effects of the C-terminal domain
Febs J., n/a, 2024
2Z0T
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BU of 2z0t by Molmil
Crystal structure of hypothetical protein PH0355
分子名称: Putative uncharacterized protein PH0355
著者Murayama, K, Takemoto, C, Kato-Murayama, M, Kawazoe, M, Terada, T, Shirouzu, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2007-05-07
公開日2007-11-13
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Crystal structure of hypothetical protein PH0355
To be Published
2YKV
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BU of 2ykv by Molmil
Structural Determinants of the Beta-Selectivity of a Bacterial Aminotransferase
分子名称: 1,2-ETHANEDIOL, 4'-DEOXY-4'-ACETYLYAMINO-PYRIDOXAL-5'-PHOSPHATE, BETA-TRANSAMINASE
著者Wybenga, G.G, Crismaru, C.G, Janssen, D.B, Dijkstra, B.W.
登録日2011-05-30
公開日2012-05-30
最終更新日2024-05-01
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Structural Determinants of the Beta-Selectivity of a Bacterial Aminotransferase.
J.Biol.Chem., 287, 2012
2YSP
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BU of 2ysp by Molmil
Solution structure of the C2H2 type zinc finger (region 507-539) of human Zinc finger protein 224
分子名称: ZINC ION, Zinc finger protein 224
著者Takahashi, M, Kuwasako, K, Tsuda, K, Tanabe, W, Harada, T, Watanabe, S, Tochio, N, Muto, Y, Kigawa, T, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2007-04-03
公開日2007-10-09
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献Solution structure of the C2H2 type zinc finger (region 507-539)of human Zinc finger protein 224
To be Published
2YT5
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Solution structure of the PHD domain of Metal-response element-binding transcription factor 2
分子名称: Metal-response element-binding transcription factor 2, ZINC ION
著者Masuda, K, Muto, Y, Isono, K, Watanabe, S, Harada, T, Kigawa, T, Koseki, H, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2007-04-05
公開日2008-04-15
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献Solution structure of the PHD domain of Metal-response element-binding transcription factor 2
To be Published
7C49
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BU of 7c49 by Molmil
nicA2 with cofactor FAD and substrate nicotine
分子名称: 5-[(2S)-1-methylpyrrolidin-2-yl]pyridin-2-ol, Amine oxidase, FLAVIN-ADENINE DINUCLEOTIDE
著者Xu, P, Zhang, K.
登録日2020-05-15
公開日2020-06-03
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (2.25 Å)
主引用文献Molecular Deceleration Regulates Toxicant Release to Prevent Cell Damage in Pseudomonas putida S16 (DSM 28022).
Mbio, 11, 2020
2YFQ
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Crystal structure of Glutamate dehydrogenase from Peptoniphilus asaccharolyticus
分子名称: NAD-SPECIFIC GLUTAMATE DEHYDROGENASE, SULFATE ION
著者Oliveira, T, Panjikar, S, Carrigan, J.B, Sharkey, M.A, Hamza, M, Engel, P.C, Khan, A.R.
登録日2011-04-07
公開日2011-11-23
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (2.94 Å)
主引用文献Crystal Structure of Nad-Dependent Peptoniphilus Asaccharolyticus Glutamate Dehydrogenase Reveals Determinants of Cofactor Specificity.
J.Struct.Biol., 177, 2012
2YTF
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Solution structure of the C2H2 type zinc finger (region 607-639) of human Zinc finger protein 268
分子名称: ZINC ION, Zinc finger protein 268
著者Tomizawa, T, Tochio, N, Abe, H, Saito, K, Li, H, Sato, M, Koshiba, S, Kobayashi, N, Kigawa, T, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2007-04-05
公開日2007-10-09
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献Solution structure of the C2H2 type zinc finger (region 607-639) of human Zinc finger protein 268
To be Published
2YLE
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Crystal structure of the human Spir-1 KIND FSI domain in complex with the FSI peptide
分子名称: FORMIN-2, PROTEIN SPIRE HOMOLOG 1
著者Zeth, K, Pechlivanis, M, Vonrhein, C, Kerkhoff, E.
登録日2011-06-01
公開日2011-06-08
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Molecular Basis of Actin Nucleation Factor Cooperativity: Crystal Structure of the Spir-1 Kinase Non-Catalytic C-Lobe Domain (Kind)Formin-2 Formin Spir Interaction Motif (Fsi) Complex.
J.Biol.Chem., 286, 2011

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