PDB: 47011 件ウェブページステータス検索Chemie searchBIRD

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2KH8	Solution Structure of cis-5R,6S-thymine glycol opposite complementary guanine in duplex DNA 分子名称: 5'-D(*AP*CP*AP*AP*AP*CP*GP*CP*GP*CP*AP*C)-3', 5'-D(*GP*TP*GP*CP*GP*(CTG)P*GP*TP*TP*TP*GP*T)-3' 著者 Brown, K.L. 登録日 2009-03-24 公開日 2009-12-01 最終更新日 2024-05-22 実験手法 SOLUTION NMR 主引用文献 The cis-(5R,6S)-thymine glycol lesion occupies the wobble position when mismatched with deoxyguanosine in DNA Biochemistry, 48, 2009
2KHU	Solution Structure of the Ubiquitin-Binding Motif of Human Polymerase Iota 分子名称: Immunoglobulin G-binding protein G, DNA polymerase iota 著者 Bomar, M.G, D'Souza, S, Bienko, M, Dikic, I, Walker, G. 登録日 2009-04-11 公開日 2010-02-23 最終更新日 2024-05-22 実験手法 SOLUTION NMR 主引用文献 Unconventional Ubiquitin Recognition by the Ubiquitin-Binding Motif within the Y Family DNA Polymerases iota and Rev1. Mol.Cell, 37, 2010
2KYY	Solution NMR Structure of the N-terminal Domain of Putative ATP-dependent DNA Helicase RecG-related Protein from Nitrosomonas europaea, Northeast Structural Genomics Consortium Target NeR70A 分子名称: Possible ATP-dependent DNA helicase RecG-related protein 著者 Eletsky, A, Mills, J.L, Lee, H, Maglaqui, M, Ciccosanti, C, Hamilton, K, Rost, B, Acton, T.B, Xiao, R, Everett, J.K, Montelione, G.T, Prestegard, J.H, Szyperski, T, Northeast Structural Genomics Consortium (NESG) 登録日 2010-06-09 公開日 2010-08-11 最終更新日 2024-05-15 実験手法 SOLUTION NMR 主引用文献 Solution NMR Structure of the N-terminal Domain of Putative ATP-dependent DNA Helicase RecG-related Protein from Nitrosomonas europaea To be Published
2L1O	Zinc to cadmium replacement in the A. thaliana SUPERMAN Cys2His2 zinc finger induces structural rearrangements of typical DNA base determinant positions 分子名称: CADMIUM ION, Transcriptional regulator SUPERMAN 著者 Malgieri, G, Zaccaro, L, Leone, M, Bucci, E, Esposito, S, Baglivo, I, Del Gatto, A, Scandurra, R, Pedone, P.V, Fattorusso, R, Isernia, C. 登録日 2010-07-31 公開日 2011-06-08 最終更新日 2024-11-06 実験手法 SOLUTION NMR 主引用文献 Zinc to cadmium replacement in the A. thaliana SUPERMAN Cys(2) His(2) zinc finger induces structural rearrangements of typical DNA base determinant positions. Biopolymers, 95, 2011
6O3O	Structure of human DNAM-1 (CD226) bound to nectin-like protein-5 (necl-5) 分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CD226 antigen, ... 著者 Deuss, F.A, Watson, G.M, Rossjohn, J, Berry, R. 登録日 2019-02-27 公開日 2019-07-10 最終更新日 2024-10-16 実験手法 X-RAY DIFFRACTION (2.8 Å) 主引用文献 Structural basis for the recognition of nectin-like protein-5 by the human-activating immune receptor, DNAM-1. J.Biol.Chem., 294, 2019
1E0H	Inhibitor Protein Im9 bound to its partner E9 DNase 分子名称: IMMUNITY PROTEIN FOR COLICIN E9 著者 Boetzel, R, Czisch, M, Kaptein, R, Hemmings, A.M, James, R, Kleanthous, C, Moore, G.R. 登録日 2000-03-28 公開日 2000-10-30 最終更新日 2024-05-15 実験手法 SOLUTION NMR 主引用文献 NMR investigation of the interaction of the inhibitor protein Im9 with its partner DNase. Protein Sci., 9, 2000
4RTF	Crystal structure of molecular chaperone DnaK from Mycobacterium tuberculosis H37Rv 分子名称: ADENOSINE-5'-TRIPHOSPHATE, Chaperone protein DnaK, TETRAETHYLENE GLYCOL 著者 Filippova, E.V, Minasov, G, Kiryukhina, O, Endres, M, Babnigg, G, Rubin, E, Sacchettini, J, Joachimiak, A, Anderson, W.F, Midwest Center for Structural Genomics (MCSG), Structures of Mtb Proteins Conferring Susceptibility to Known Mtb Inhibitors (MTBI) 登録日 2014-11-14 公開日 2014-12-10 最終更新日 2023-09-20 実験手法 X-RAY DIFFRACTION (2.77 Å) 主引用文献 Crystal structure of molecular chaperone DnaK from Mycobacterium tuberculosis H37Rv To be Published
7KZU	Quasi-intermediate state (Q) of a truncated Hsp70 DnaK fused with a substrate peptide 分子名称: ADENOSINE-5'-TRIPHOSPHATE, Chaperone protein DnaK fused with substrate peptide,Chaperone protein DnaK fused with substrate peptide, GLYCEROL, ... 著者 Wang, W, Hendrickson, W.A. 登録日 2020-12-10 公開日 2021-05-12 最終更新日 2023-10-18 実験手法 X-RAY DIFFRACTION (2.15 Å) 主引用文献 Intermediates in allosteric equilibria of DnaK-ATP interactions with substrate peptides Acta Crystallogr.,Sect.D, 77, 2021
6Z5N	DnaJB1 JD-GF 分子名称: DnaJ homolog subfamily B member 1 著者 Avraham-Abayev, M, London, N, Rosenzweig, R. 登録日 2020-05-27 公開日 2020-11-18 最終更新日 2024-06-19 実験手法 SOLUTION NMR 主引用文献 HSP40 proteins use class-specific regulation to drive HSP70 functional diversity. Nature, 587, 2020
7P1E	Structure of KDNase from Aspergillus Terrerus in complex with 2,3-difluoro-2-keto-3-deoxynononic acid 分子名称: (2R,3R,4R,5R,6S)-2,3-bis(fluoranyl)-4,5-bis(oxidanyl)-6-[(1R,2R)-1,2,3-tris(oxidanyl)propyl]oxane-2-carboxylic acid, 3-deoxy-3-fluoro-D-erythro-alpha-L-manno-non-2-ulopyranosonic acid, CALCIUM ION, ... 著者 Gloster, T.M, McMahon, S.A. 登録日 2021-07-01 公開日 2021-10-20 最終更新日 2024-10-16 実験手法 X-RAY DIFFRACTION (1.53 Å) 主引用文献 Kinetic and Structural Characterization of Sialidases (Kdnases) from Ascomycete Fungal Pathogens. Acs Chem.Biol., 16, 2021
7P1B	Apo structure of KDNase from Aspergillus Terrerus 分子名称: Sialidase domain-containing protein 著者 Gloster, T.M, McMahon, S.A. 登録日 2021-07-01 公開日 2021-10-20 最終更新日 2024-01-31 実験手法 X-RAY DIFFRACTION (1.45 Å) 主引用文献 Kinetic and Structural Characterization of Sialidases (Kdnases) from Ascomycete Fungal Pathogens. Acs Chem.Biol., 16, 2021
7P1O	Structure of KDNase from Aspergillus Terrerus in complex with 2-keto-3-deoxynononic acid 分子名称: CHLORIDE ION, GLYCEROL, Sialidase domain-containing protein, ... 著者 Gloster, T.M, McMahon, S.A. 登録日 2021-07-02 公開日 2021-10-20 最終更新日 2024-01-31 実験手法 X-RAY DIFFRACTION (1.6 Å) 主引用文献 Kinetic and Structural Characterization of Sialidases (Kdnases) from Ascomycete Fungal Pathogens. Acs Chem.Biol., 16, 2021
7P1S	Structure of KDNase from Trichophyton Rubrum in complex with 2,3-didehydro-2,3-dideoxy-D-glycero-D-galacto-nonulosonic acid. 分子名称: 2,6-anhydro-3-deoxy-D-glycero-D-galacto-non-2-enonic acid, Extracellular sialidase/neuraminidase, SODIUM ION 著者 Gloster, T.M, McMahon, S.A. 登録日 2021-07-02 公開日 2021-10-20 最終更新日 2024-01-31 実験手法 X-RAY DIFFRACTION (1.92 Å) 主引用文献 Kinetic and Structural Characterization of Sialidases (Kdnases) from Ascomycete Fungal Pathogens. Acs Chem.Biol., 16, 2021
7P1F	Structure of KDNase from Aspergillus terrerus in complex with 2,3-didehydro-2,3-dideoxy-D-glycero-D-galacto-nonulosonic acid. 分子名称: 2,6-anhydro-3-deoxy-D-glycero-D-galacto-non-2-enonic acid, CALCIUM ION, GLYCEROL, ... 著者 Gloster, T.M, McMahon, S.A. 登録日 2021-07-01 公開日 2021-10-20 最終更新日 2024-01-31 実験手法 X-RAY DIFFRACTION (1.45 Å) 主引用文献 Kinetic and Structural Characterization of Sialidases (Kdnases) from Ascomycete Fungal Pathogens. Acs Chem.Biol., 16, 2021
7P1U	Structure of KDNase from Trichophyton Rubrum in complex with 2-keto-3-deoxynononic acid 分子名称: Extracellular sialidase/neuraminidase, GLYCEROL, deamino-alpha-neuraminic acid 著者 Gloster, T.M, McMahon, S.A. 登録日 2021-07-02 公開日 2021-10-20 最終更新日 2024-01-31 実験手法 X-RAY DIFFRACTION (0.99 Å) 主引用文献 Kinetic and Structural Characterization of Sialidases (Kdnases) from Ascomycete Fungal Pathogens. Acs Chem.Biol., 16, 2021
7P1Q	Structure of KDNase from Trichophyton Rubrum in complex with 2-keto-3-deoxynononic acid 分子名称: Extracellular sialidase/neuraminidase, GLYCEROL, deamino-alpha-neuraminic acid 著者 Gloster, T.M, McMahon, S.A. 登録日 2021-07-02 公開日 2021-10-20 最終更新日 2024-01-31 実験手法 X-RAY DIFFRACTION (0.91 Å) 主引用文献 Kinetic and Structural Characterization of Sialidases (Kdnases) from Ascomycete Fungal Pathogens. Acs Chem.Biol., 16, 2021
7P1R	Structure of Trichophyton Rubrum KDNase in complex with 2,3-difluoro-KDN 分子名称: 3-deoxy-3-fluoro-D-erythro-alpha-L-manno-non-2-ulopyranosonic acid, Extracellular sialidase/neuraminidase, PHOSPHATE ION, ... 著者 Gloster, T.M, McMahon, S.A. 登録日 2021-07-02 公開日 2021-10-20 最終更新日 2024-11-06 実験手法 X-RAY DIFFRACTION (1.75 Å) 主引用文献 Kinetic and Structural Characterization of Sialidases (Kdnases) from Ascomycete Fungal Pathogens. Acs Chem.Biol., 16, 2021
7P1D	Structure of KDNase from Aspergillus Terrerus in complex with 2-keto-3-deoxynononic acid 分子名称: CALCIUM ION, Sialidase domain-containing protein, deamino-alpha-neuraminic acid 著者 Gloster, T.M, McMahon, S.A. 登録日 2021-07-01 公開日 2021-10-20 最終更新日 2024-10-16 実験手法 X-RAY DIFFRACTION (1.69 Å) 主引用文献 Kinetic and Structural Characterization of Sialidases (Kdnases) from Ascomycete Fungal Pathogens. Acs Chem.Biol., 16, 2021
7P1V	Apo structure of KDNase from Trichophyton Rubrum 分子名称: CALCIUM ION, Extracellular sialidase/neuraminidase, GLYCEROL 著者 Gloster, T.M, McMahon, S.A. 登録日 2021-07-02 公開日 2021-10-20 最終更新日 2024-01-31 実験手法 X-RAY DIFFRACTION (1.47 Å) 主引用文献 Kinetic and Structural Characterization of Sialidases (Kdnases) from Ascomycete Fungal Pathogens. Acs Chem.Biol., 16, 2021
6W6I	The Mycobacterium tuberculosis ClpB disaggregase hexamer structure in conformation T in the presence of DnaK chaperone and a model substrate 分子名称: ADENOSINE-5'-DIPHOSPHATE, Chaperone protein ClpB, PHOSPHOTHIOPHOSPHORIC ACID-ADENYLATE ESTER, ... 著者 Yin, Y, Li, H. 登録日 2020-03-17 公開日 2021-05-26 最終更新日 2024-05-29 実験手法 ELECTRON MICROSCOPY (3.5 Å) 主引用文献 Structural basis for aggregate dissolution and refolding by the Mycobacterium tuberculosis ClpB-DnaK bi-chaperone system. Cell Rep, 35, 2021
6W6H	The Mycobacterium tuberculosis ClpB disaggregase hexamer structure in conformation II in the presence of DnaK chaperone and a model substrate 分子名称: ADENOSINE-5'-DIPHOSPHATE, Chaperone protein ClpB, PHOSPHOTHIOPHOSPHORIC ACID-ADENYLATE ESTER, ... 著者 Yin, Y, Li, H. 登録日 2020-03-16 公開日 2021-05-26 最終更新日 2024-05-29 実験手法 ELECTRON MICROSCOPY (3.3 Å) 主引用文献 Structural basis for aggregate dissolution and refolding by the Mycobacterium tuberculosis ClpB-DnaK bi-chaperone system. Cell Rep, 35, 2021
6W6J	The Mycobacterium tuberculosis ClpB disaggregase hexamer structure with a locally refined N-terminal domain in the presence of DnaK chaperone and a model substrate 分子名称: ADENOSINE-5'-DIPHOSPHATE, Chaperone protein ClpB, PHOSPHOTHIOPHOSPHORIC ACID-ADENYLATE ESTER, ... 著者 Yin, Y, Li, H. 登録日 2020-03-17 公開日 2021-05-26 最終更新日 2024-05-29 実験手法 ELECTRON MICROSCOPY (3.2 Å) 主引用文献 Structural basis for aggregate dissolution and refolding by the Mycobacterium tuberculosis ClpB-DnaK bi-chaperone system. Cell Rep, 35, 2021
6W6G	The Mycobacterium tuberculosis ClpB disaggregase hexamer structure in conformation I in the presence of DnaK chaperone and a model substrate 分子名称: ADENOSINE-5'-DIPHOSPHATE, Chaperone protein ClpB, PHOSPHOTHIOPHOSPHORIC ACID-ADENYLATE ESTER, ... 著者 Yin, Y, Li, H. 登録日 2020-03-16 公開日 2021-03-17 最終更新日 2024-05-29 実験手法 ELECTRON MICROSCOPY (3.1 Å) 主引用文献 Structural basis for aggregate dissolution and refolding by the Mycobacterium tuberculosis ClpB-DnaK bi-chaperone system. Cell Rep, 35, 2021
3AT6	Side-necked turtle (Pleurodira, Chelonia, REPTILIA) hemoglobin: cDNA-derived primary structures and X-ray crystal structures of Hb A 分子名称: AlphaA-globin, Beta-globin, PROTOPORPHYRIN IX CONTAINING FE 著者 Hasegawa, T, Shishikura, F, Kuwada, T. 登録日 2010-12-26 公開日 2011-04-20 最終更新日 2023-11-01 実験手法 X-RAY DIFFRACTION (2.35 Å) 主引用文献 Side-necked turtle (Pleurodira, Chelonia, reptilia) hemoglobin: cDNA-derived primary structures and X-ray crystal structures of Hb A. Iubmb Life, 63, 2011
2XZJ	THE ASPERGILLUS FUMIGATUS SIALIDASE IS A KDNASE: STRUCTURAL AND MECHANISTIC INSIGHTS 分子名称: 2,6-anhydro-3-deoxy-D-glycero-D-galacto-non-2-enonic acid, EXTRACELLULAR SIALIDASE/NEURAMINIDASE, PUTATIVE, ... 著者 Telford, J.C, Yeung, J.H.F, Kiefel, M.J, Watts, A.G, Hader, S, Chan, J, Bennet, A.J, Moore, M.M, Taylor, G.L. 登録日 2010-11-26 公開日 2011-01-19 最終更新日 2023-12-20 実験手法 X-RAY DIFFRACTION (1.84 Å) 主引用文献 The Aspergillus Fumigatus Sialidase is a Kdnase: Structural and Mechanistic Insights. J.Biol.Chem., 286, 2011

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