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2P04
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2.1 Ang structure of the dimerized PAS domain of signal transduction histidine kinase from Nostoc punctiforme PCC 73102 with homology to the H-NOXA/H-NOBA domain of the soluble guanylyl cyclase
分子名称: signal transduction histidine kinase
著者van den Akker, F, Ma, X.
登録日2007-02-28
公開日2007-11-13
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2.11 Å)
主引用文献PAS-mediated dimerization of soluble guanylyl cyclase revealed by signal transduction histidine kinase domain crystal structure.
J.Biol.Chem., 283, 2008
2ZOX
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BU of 2zox by Molmil
Crystal Structure of the Covalent Intermediate of Human Cytosolic beta-Glucosidase
分子名称: 4-nitrophenyl alpha-D-glucopyranoside, Cytosolic beta-glucosidase, GLYCEROL, ...
著者Noguchi, J, Hayashi, Y, Baba, Y, Okino, N, Kimura, M, Ito, M, Kakuta, Y.
登録日2008-06-17
公開日2008-09-30
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Crystal structure of the covalent intermediate of human cytosolic beta-glucosidase
Biochem.Biophys.Res.Commun., 374, 2008
2QAA
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BU of 2qaa by Molmil
Crystal structure of the second tetrahedral intermediates of SGPB at pH 7.3
分子名称: 1,2-ETHANEDIOL, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, ACETIC ACID, ...
著者Lee, T.W, James, M.N.G.
登録日2007-06-14
公開日2007-12-11
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (1.23 Å)
主引用文献1.2A-resolution crystal structures reveal the second tetrahedral intermediates of streptogrisin B (SGPB).
Biochim.Biophys.Acta, 1784, 2008
2QA9
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BU of 2qa9 by Molmil
Crystal structure of the second tetrahedral intermediates of SGPB at pH 4.2
分子名称: 1,2-ETHANEDIOL, 4-mer peptide DAIY, CHLORIDE ION, ...
著者Lee, T.W, James, M.N.G.
登録日2007-06-14
公開日2007-12-11
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.18 Å)
主引用文献1.2A-resolution crystal structures reveal the second tetrahedral intermediates of streptogrisin B (SGPB).
Biochim.Biophys.Acta, 1784, 2008
6XWV
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BU of 6xwv by Molmil
Crystal structure of drosophila melanogaster CENP-C bound to CAL1
分子名称: Calmodulin, Ryanodine Receptor 2
著者Jeyaprakash, A.A, Medina-Pritchard, B, Lazou, V, Zou, J, Byron, O, Abad, M.A, Rappsilber, J, Heun, P.
登録日2020-01-24
公開日2020-04-01
最終更新日2024-05-01
実験手法X-RAY DIFFRACTION (2.27 Å)
主引用文献Structural basis for centromere maintenance by Drosophila CENP-A chaperone CAL1.
Embo J., 39, 2020
5RNT
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BU of 5rnt by Molmil
X-RAY ANALYSIS OF CUBIC CRYSTALS OF THE COMPLEX FORMED BETWEEN RIBONUCLEASE T1 AND GUANOSINE-3',5'-BISPHOSPHATE
分子名称: GUANOSINE-3',5'-DIPHOSPHATE, RIBONUCLEASE T1
著者Saenger, W, Heinemann, U, Lenz, A.
登録日1991-03-28
公開日1993-01-15
最終更新日2017-11-29
実験手法X-RAY DIFFRACTION (3.2 Å)
主引用文献X-ray analysis of cubic crystals of the complex formed between ribonuclease T1 and guanosine-3',5'-bisphosphate.
Acta Crystallogr.,Sect.B, 47, 1991
2MN3
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BU of 2mn3 by Molmil
Structure of Platypus 'Intermediate' Defensin-like Peptide (Int-DLP)
分子名称: Defensin-BvL
著者Torres, A.M, Bansal, P.S, Koh, J.M.S, Pages, G, Wu, M.J, Kuchel, P.W.
登録日2014-03-27
公開日2014-09-17
最終更新日2023-06-14
実験手法SOLUTION NMR
主引用文献Structure and antimicrobial activity of platypus 'intermediate' defensin-like peptide.
Febs Lett., 588, 2014
3O31
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BU of 3o31 by Molmil
E81Q mutant of MtNAS in complex with a reaction intermediate
分子名称: BROMIDE ION, N-[(3S)-3-amino-3-carboxypropyl]-L-glutamic acid, ThermoNicotianamine Synthase
著者Dreyfus, C, Pignol, D, Arnoux, P.
登録日2010-07-23
公開日2011-06-08
最終更新日2014-11-12
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献The crystallographic structure of thermoNicotianamine synthase with a synthetic reaction intermediate highlights the sequential processing mechanism.
Chem.Commun.(Camb.), 47, 2011
2RPI
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BU of 2rpi by Molmil
The NMR structure of the submillisecond folding intermediate of the Thermus thermophilus ribonuclease H
分子名称: Ribonuclease H
著者Zhou, Z, Feng, H, Bai, Y.
登録日2008-05-16
公開日2009-03-31
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献The high-resolution NMR structure of the early folding intermediate of the Thermus thermophilus ribonuclease H
J.Mol.Biol., 384, 2008
2FWQ
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BU of 2fwq by Molmil
Reduced enolate chromophore intermediate for Y66H GFP variant
分子名称: Green fluorescent protein, MAGNESIUM ION
著者Barondeau, D.P, Tainer, J.A, Getzoff, E.D.
登録日2006-02-02
公開日2006-03-14
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献Structural evidence for an enolate intermediate in GFP fluorophore biosynthesis.
J.Am.Chem.Soc., 128, 2006
6XWU
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BU of 6xwu by Molmil
Crystal structure of drosophila melanogaster CENP-C cumin domain
分子名称: RE68959p
著者Jeyaprakash, A.A, Medina-Pritchard, B, Lazou, V, Zou, J, Byron, O, Abad, M.A, Rappsilber, J, Heun, P.
登録日2020-01-24
公開日2020-04-01
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.82 Å)
主引用文献Structural basis for centromere maintenance by Drosophila CENP-A chaperone CAL1.
Embo J., 39, 2020
2FZU
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BU of 2fzu by Molmil
Reduced enolate chromophore intermediate for GFP variant
分子名称: 1,2-ETHANEDIOL, Green fluorescent protein, MAGNESIUM ION
著者Barondeau, D.P, Tainer, J.A, Getzoff, E.D.
登録日2006-02-10
公開日2006-03-14
最終更新日2024-07-10
実験手法X-RAY DIFFRACTION (1.25 Å)
主引用文献Structural evidence for an enolate intermediate in GFP fluorophore biosynthesis.
J.Am.Chem.Soc., 128, 2006
3REV
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BU of 3rev by Molmil
Crystal structure of human alloreactive tcr nb20
分子名称: 1,2-ETHANEDIOL, TCR NB20 ALPHA CHAIN, TCR NB20 BETA CHAIN
著者Wood, A, Mohammed, F, Salim, M, Tranter, A, Rickinson, A.B, Moss, P.A.H, Stauss, H.J, Steven, N.M, Willcox, B.E.
登録日2011-04-05
公開日2012-01-18
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Structural and energetic evidence for highly peptide-specific tumor antigen targeting via allo-MHC restriction.
Proc.Natl.Acad.Sci.USA, 108, 2011
2LR3
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BU of 2lr3 by Molmil
Solution structure of the anti-fungal defensin DEF4 (MTR_8g070770) from Medicago truncatula (barrel clover)
分子名称: Defensin
著者Buchko, G.W, Smith, T.J, Shah, D.M.
登録日2012-03-21
公開日2012-09-26
最終更新日2023-06-14
実験手法SOLUTION NMR
主引用文献Structural and Functional Studies of a Phosphatidic Acid-Binding Antifungal Plant Defensin MtDef4: Identification of an RGFRRR Motif Governing Fungal Cell Entry.
Plos One, 8, 2013
6OU2
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Crystal Structure of the D478N Variant of the Myocilin Olfactomedin Domain
分子名称: GLYCEROL, Myocilin, SODIUM ION
著者Hill, S.E, Kwon, M.S, Lieberman, R.L.
登録日2019-05-03
公開日2019-07-03
最終更新日2020-01-15
実験手法X-RAY DIFFRACTION (1.963 Å)
主引用文献Stable calcium-free myocilin olfactomedin domain variants reveal challenges in differentiating between benign and glaucoma-causing mutations.
J.Biol.Chem., 294, 2019
1IDG
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BU of 1idg by Molmil
THE NMR SOLUTION STRUCTURE OF THE COMPLEX FORMED BETWEEN ALPHA-BUNGAROTOXIN AND AN 18MER COGNATE PEPTIDE
分子名称: ACETYLCHOLINE RECEPTOR PROTEIN, ALPHA CHAIN, ALPHA-BUNGAROTOXIN
著者Zeng, H, Moise, L, Grant, M.A, Hawrot, E.
登録日2001-04-04
公開日2001-04-25
最終更新日2022-02-23
実験手法SOLUTION NMR
主引用文献The solution structure of the complex formed between alpha-bungarotoxin and an 18-mer cognate peptide derived from the alpha 1 subunit of the nicotinic acetylcholine receptor from Torpedo californica.
J.Biol.Chem., 276, 2001
6OU3
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Crystal Structure of the D478S Variant of the Myocilin Olfactomedin Domain
分子名称: GLYCEROL, Myocilin, SODIUM ION
著者Hill, S.E, Kwon, M.S, Lieberman, R.L.
登録日2019-05-03
公開日2019-07-03
最終更新日2020-01-15
実験手法X-RAY DIFFRACTION (1.796 Å)
主引用文献Stable calcium-free myocilin olfactomedin domain variants reveal challenges in differentiating between benign and glaucoma-causing mutations.
J.Biol.Chem., 294, 2019
6OU1
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BU of 6ou1 by Molmil
Crystal Structure of the Computationally-derived 21-Variant of the Myocilin Olfactomedin Domain
分子名称: CALCIUM ION, GLYCEROL, Myocilin, ...
著者Hill, S.E, Kwon, M.S, Lieberman, R.L.
登録日2019-05-03
公開日2019-07-03
最終更新日2020-01-15
実験手法X-RAY DIFFRACTION (1.878 Å)
主引用文献Stable calcium-free myocilin olfactomedin domain variants reveal challenges in differentiating between benign and glaucoma-causing mutations.
J.Biol.Chem., 294, 2019
6OU0
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BU of 6ou0 by Molmil
Crystal Structure of the D380A/D478S Variant of the Myocilin Olfactomedin Domain
分子名称: GLYCEROL, Myocilin
著者Hill, S.E, Kwon, M.S, Lieberman, R.L.
登録日2019-05-03
公開日2019-07-03
最終更新日2020-01-15
実験手法X-RAY DIFFRACTION (1.799 Å)
主引用文献Stable calcium-free myocilin olfactomedin domain variants reveal challenges in differentiating between benign and glaucoma-causing mutations.
J.Biol.Chem., 294, 2019
5IHD
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BU of 5ihd by Molmil
Calcium(II) and copper(II) bound to the Z-DNA form of d(CGCGCG), complexed by L-lactate and succinate
分子名称: (2S)-2-HYDROXYPROPANOIC ACID, CALCIUM ION, COPPER (II) ION, ...
著者Rohner, M, Medina-Molner, A, Spingler, B.
登録日2016-02-29
公開日2016-06-29
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.57 Å)
主引用文献N,N,O and N,O,N Meridional cis Coordination of Two Guanines to Copper(II) by d(CGCGCG)2.
Inorg.Chem., 55, 2016
3D1D
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BU of 3d1d by Molmil
Hexagonal crystal structure of Tas3 C-terminal alpha motif
分子名称: RNA-induced transcriptional silencing complex protein tas3
著者Li, H, Patel, D.J.
登録日2008-05-05
公開日2009-04-21
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献An alpha motif at Tas3 C terminus mediates RITS cis spreading and promotes heterochromatic gene silencing.
Mol.Cell, 34, 2009
5ICZ
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BU of 5icz by Molmil
Cetuximab Fab in complex with GQFDLSTRRLKG peptide
分子名称: Cetuximab Fab heavy chain, Cetuximab Fab light chain, Meditope, ...
著者Bzymek, K.P, Williams, J.C.
登録日2016-02-23
公開日2016-06-15
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2.55 Å)
主引用文献Cyclization strategies of meditopes: affinity and diffraction studies of meditope-Fab complexes.
Acta Crystallogr F Struct Biol Commun, 72, 2016
2YLK
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BU of 2ylk by Molmil
Carbohydrate-binding module CBM3b from the cellulosomal cellobiohydrolase 9A from Clostridium thermocellum
分子名称: CELLULOSE 1,4-BETA-CELLOBIOSIDASE
著者Yaniv, O, Petkun, S, Shimon, L.J.W, Bayer, E.A, Lamed, R, Frolow, F.
登録日2011-06-02
公開日2012-04-25
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献A Single Mutation Reforms the Binding Activity of an Adhesion-Deficient Family 3 Carbohydrate-Binding Module
Acta Crystallogr.,Sect.D, 68, 2012
4XSN
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BU of 4xsn by Molmil
Copper(II) bound to the Z-DNA form of d(CGCGCG)
分子名称: COPPER (II) ION, DNA (5'-D(*CP*(BGM)P*CP*GP*CP*GP)-3')
著者Rohner, M, Medina-Molner, A, Spingler, B.
登録日2015-01-22
公開日2016-02-03
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (1.452 Å)
主引用文献N,N,O and N,O,N Meridional cis Coordination of Two Guanines to Copper(II) by d(CGCGCG)2.
Inorg.Chem., 55, 2016
3D1B
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BU of 3d1b by Molmil
Tetragonal crystal structure of Tas3 C-terminal alpha motif
分子名称: RNA-induced transcriptional silencing complex protein tas3
著者Li, H, Patel, D.J.
登録日2008-05-05
公開日2009-04-21
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献An alpha motif at Tas3 C terminus mediates RITS cis spreading and promotes heterochromatic gene silencing.
Mol.Cell, 34, 2009

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